Query= MSMg01no523_n17.b1 MSMg01no523_n17.b1 CHROMAT_FILE:
MSMg01no523_n17.b1 PHD_FILE: MSMg01no523_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:55 2005
(583 letters)
>mm_chr19_4353890_4354872
Length = 983
Score = 1067 bits (552), Expect = 0.0
Identities = 572/579 (98%)
Strand = Plus / Minus
Query: 5 gaattcagtaaattgcaacatgaagccaaagcatggtggtctttgtgtgttatcccagca 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattcagtaaaaggaaacatgaagccaaagcatggtggtctttgtgtgttatcccagca 559
Query: 65 tttgggaggtagagacaagaggattgcctgtactgcagagtaaacttttgtgtcaaacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttgggaggtagagacaagaggattgcctgtactgcagagtaaacttttgtgtcaaacat 499
Query: 125 gagaattacagttgcattgcttataaatgtattctttaatagttctagaatttaatttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagaattacagttgcattgcttataaatgtattctttaatagttctagaatttaatttaa 439
Query: 185 agatgattattgttataaatatagagcttgattattaaaattgggaacattaaaaccatt 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agatgattatttttataaatatagagcttgattattaaaattgggaacattaaaaccatt 379
Query: 245 catatatgaagtctactttgtattattctgagtatctctaggtttggcttttttagtttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 catatatgaagtctactttgtattattctgagtatctctaggtttggcttttttagtttt 319
Query: 305 ttggttggttggttttttggggggtgtttttggagacaggatttccctgcgtagccttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttggttggttggttttttggggggtgtttttggagacaggatttccctgcgtagccttgt 259
Query: 365 ctgtcctagaactaacgctgtagtccacgctggcctctggctcacagagattcacttgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgtcctagaactaacgctgtagtccacgctggcctctggctcacagagattcacttgct 199
Query: 425 ccttcctcctgagtgctgagattgaaggtgagcaccaccactgcccggctcttagttttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ccttcctcctgagtgctgagattgaaggtgagcaccaccactgcccggctcttagttttt 139
Query: 485 attgttgttgttgttttgttttgctttttgtttttgcttttggnttttcgagacagggtt 544
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 138 attgttgttgttgttttgttttgctttttgtttttgcttttggtttttcgagacagggtt 79
Query: 545 tctctgtatagccctgtccgtcctggaactcactttgta 583
|||||||||||||||| | ||||||||||||||||||||
Sbjct: 78 tctctgtatagccctggctgtcctggaactcactttgta 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_n17.g1 MSMg01no523_n17.g1 CHROMAT_FILE:
MSMg01no523_n17.g1 PHD_FILE: MSMg01no523_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:55 2005
(277 letters)
>mm_chr19_4177663_4178339
Length = 677
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%)
Strand = Plus / Plus
Query: 1 ttcataatcatgtgcatgtgagcatgcagctatgtggctgctgctttccctatcccaacc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ttcataatcatgtgcatgtgagcatgcagctatgtggctgccgctttccctatcccaacc 260
Query: 61 gagtccaaacacagcatgactatgtctgttgtgtcacacaacaagccaaatttcctttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtccaaacacagcatgactatgtctgttgtgtcacacaacaagccaaatttcctttat 320
Query: 121 cattgagagtgggcgtgtctgcagcttggggtcaggtggttgtggggtgggggcaagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattgagagtgggcgtgtctgcagcttggggtcaggtggttgtggggtgggggcaagcaa 380
Query: 181 atggggtggaaagccatgagtccttgttttttggtttggtttggtttttttgagacaggg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 atggggtggaaagccatgagtccttgctttttggtttggtttggtttttttgagacaggg 440
Query: 241 tttctctgtatagccctggctggcctggaactcactc 277
|||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tttctctgtatagccctggctgtcctggaactcactc 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
