Query= MSMg01no528_m14.b1 MSMg01no528_m14.b1 CHROMAT_FILE:
MSMg01no528_m14.b1 PHD_FILE: MSMg01no528_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:29 2005
(585 letters)
>mm_chr19_59783304_59784288
Length = 985
Score = 1123 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Minus
Query: 5 gaattcctctgagcccaaagctaatgttctctctgccaccttcttccccagtcacaacaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gaattcctctgagcccaaagctaatgttctctctgccaccttcttccccagtcacaacaa 726
Query: 65 ggaaaggccaatccggggtattttcactttactatgcctcacctaccgcttggaagtgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ggaaaggccaatccggggtattttcactttactatgcctcacctaccgcttggaagtgca 666
Query: 125 aagaaaaccacttatacacagtcagagcaggatcaaaaatggcgcccatccagaggcagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagaaaaccacttatacacagtcagagcaggatcaaaaatggcgcccatccagaggcagt 606
Query: 185 gactgccattttgctgaccagcaccacttataaggtacacctttgtggtgaggatatcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gactgccattttgctgaccagcaccacttataaggtacacctttgtggtgaggatatcat 546
Query: 245 gtgagagccagagcaggagtgtcataactaacactgctgcctcctttcagtattggctag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtgagagccagagcaggagtgtcataactaacactgctgcctcctttcagtattggctag 486
Query: 305 tttgtccctcccctcaaccccttaccaccccaaagacgtaaaagcacagtgtccgtatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttgtccctcccctcaaccccttaccaccccaaagacgtaaaagcacagtgtccgtatct 426
Query: 365 gaccaagctagatttggcatctactctgcaacctgtgcctgacctaccttgcaaaagtct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaccaagctagatttggcatctactctgcaacctgtgcctgacctaccttgcaaaagtct 366
Query: 425 ttgcattttatctcgcagtttcttcagggtgcactaacaaaggaagaaaagctacatcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttgcattttatctcgcagtttcttcagggtgcactaacaaaggaagaaaagctacatcag 306
Query: 485 agttcttggctgttgacattactcagccttggaaccaccttgtctctaagaaattaccct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agttcttggctgttgacattactcagccttggaaccaccttgtctctaagaaattaccct 246
Query: 545 gtctccaggaaattctatcctgcatggtctatcccccagga 585
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtctccaggaaattctatcctgcatggtctatcccccagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_m14.g1 MSMg01no528_m14.g1 CHROMAT_FILE:
MSMg01no528_m14.g1 PHD_FILE: MSMg01no528_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:29 2005
(644 letters)
>mm_chr19_59643957_59645001
Length = 1045
Score = 1237 bits (640), Expect = 0.0
Identities = 643/644 (99%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 1 acagcaagcctcctgcctcagcttcctggcttggtttattacaatgagttgtgagtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcaagcctcctgcctcagcttcctggcttggtttattacaatgagttgtgagtggaa 260
Query: 61 gatggttaacttggccttttgagatctttgaatggttttactcagtccatcaagtatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatggttaacttggccttttgagatctttgaatggttttactcagtccatcaagtatgca 320
Query: 121 tggctttgcagatataaatatgaaattaataaaataagaatcaagtcacaaggtgagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctttgcagatataaatatgaaattaataaaataagaatcaagtcacaaggtgagttt 380
Query: 181 gagattgaggattgaagtgcctactttatattcaaagaatactaaaaattagccatgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagattgaggattgaagtgcctactttatattcaaagaatactaaaaattagccatgctc 440
Query: 241 ctgttatcggagacattacccccaagagtagtcacttgagtgtacagcaagatttttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgttatcggagacattacccccaagagtagtcacttgagtgtacagcaagatttttcac 500
Query: 301 ttttgacttcctggctcacagtgttgtcgtgttcttacatacaaccctaggaaggtattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttgacttcctggctcacagtgttgtcgtgttcttacatacaaccctaggaaggtattt 560
Query: 361 gcatgttaacttctctcagtctctgtaacaaagattattctttagttattatagaatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcatgttaacttctctcagtctctgtaacaaagattattctttagttattatagaatcat 620
Query: 421 gatttaaacataagatatggatggcagaacagatagcagatagggaagccaaggtttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatttaaacataagatatggatggcagaacagatagcagatagggaagccaaggtttgat 680
Query: 481 taagaaagttgctcacccaaaatgtactgtctttctcaaaaaaaaaaaaaaaa-ccctcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 taagaaagttgctcacccaaaatgtactgtctttctcaaaaaaaaaaaaaaaaaccctcc 740
Query: 540 actgatttaagtgtctgataattcacttgataatagtttcgaaagcctgcaaaatagatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actgatttaagtgtctgataattcacttgataatagtttcgaaagcctgcaaaatagatt 800
Query: 600 gatttttctgactttgctcaattcgttagagcctttcctgctca 643
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gatttttctgactttgctcaattcgttagagcctttcctgctca 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
