Query= MSMg01no530_i17.b1 MSMg01no530_i17.b1 CHROMAT_FILE:
MSMg01no530_i17.b1 PHD_FILE: MSMg01no530_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:54 2005
(679 letters)
>mm_chr19_17457696_17458772
Length = 1077
Score = 1116 bits (577), Expect = 0.0
Identities = 654/681 (96%), Gaps = 6/681 (0%)
Strand = Plus / Plus
Query: 1 atgatacccaaaagtctaatgtaaattacttcaaacagtcctggagggatggggagtctt 60
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 atgatacccaaaagtttaatgtaaattacttcatacagtcctggagggatggggagtctt 260
Query: 61 caggagccagagcaagcagctgtcgccatccagactctccagatatcatcatggtgtctg 120
| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 261 ctggagccagagcaagcagctgtcgccatccagagtctccagatatcctcatggtgtctg 320
Query: 121 tgaaacatttaaaatggttagttcagacacaaaggcagacataccagcaagagtacaaca 180
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tgaaacatttaaaatggctagttcagacacaaaggcagacatac---caagagtacaaca 377
Query: 181 actcccaattaggcagtcccatcaccccgtgctccaacatctatggctataaacactaga 240
|||||||||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 378 gctcccaattaggcagtcccatcacactgtcctccaacatctatggctataaacactaga 437
Query: 241 agagctatttaaaagaacttgttcttgcaatgcatacttacaatctgaatattcaaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agagctatttaaaagaacttgttcttgcaatgcatacttacaatctgaatattcaaacag 497
Query: 301 tagaggcacagtgttttaataacaatgtccaggacttgctcagtgcctcagggggaggtg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tagaggcacagtgctttaataacaatgtccaggacttgctcagtgcctcagggggaggtg 557
Query: 361 actttcccttatctgtctcaatatcagtttctactgctctaacaatctctgaaaatagat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 actttcccttatctgtctcaatatcagtttctactgctctaacaatctctgaaactagat 617
Query: 421 gtttcagatgacacatgcttacaatgtcaacacttggtcagctgaggctaacttggg-ta 479
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 618 gtttcagatgacacatgcttacaatgtcaacacttgggcagctgaggccaacttgggcta 677
Query: 480 ctatagcaaggtactattttgaaatcaaaacacaaatatttccacaaaatatgatccctt 539
| ||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 c-atatcgaggtgctgttttgaaatcaaaacacaaatatttccacaaaatatgatccctt 736
Query: 540 tgccaacatagttgtttcttttatatttttgccatatcaagggctgtagctgctgtttgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgccaacatagttgtttcttttatatttttgccatatcaagggctgtagctgctgtttgg 796
Query: 600 atgtgtgtatttt-gattatggccacagtgcgttgtttgataggacctctggaacagaca 658
||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 797 atgtgtgtatttttggttatggccacagtgtgttgtttgataggacctctggaacagata 856
Query: 659 cttccttttggaaatgggatg 679
|||||||||||||||||||||
Sbjct: 857 cttccttttggaaatgggatg 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1077
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1067
Effective search space: 713823
Effective search space used: 713823
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_i17.g1 MSMg01no530_i17.g1 CHROMAT_FILE:
MSMg01no530_i17.g1 PHD_FILE: MSMg01no530_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:54 2005
(647 letters)
>mm_chr19_17530806_17531852
Length = 1047
Score = 853 bits (441), Expect = 0.0
Identities = 468/477 (98%)
Strand = Plus / Minus
Query: 171 accaaagcattttagttttatgaaggcctacttgtcagttgtcagccttaattactaggc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 accaaagcattttagttttatgaaggcctacttgtcagttgtcagccttaattactaggc 988
Query: 231 aaatgaagccctattctgaaagtcctttcctgaacctgtgtcttgtaagccattgcctgt 290
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 987 aaatgaagccctattctgaaaatcctttcctgaacctgtgtcttgtaagccattgcctgt 928
Query: 291 tttcttctataagttccagtgtttctagtttcacagtgaggtctttgatggagtctggtc 350
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 927 tttcttctataagttccagtgtttctagtttcacactgaggtctttgatggagtttggtc 868
Query: 351 attaggagttgatttttatgacattgaaactttgtgcacctaaaatgtgcaagccatttc 410
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 867 atcaggagttgatttttatgacattgaaactttgtgcacctaaaatgtttaagccatttc 808
Query: 411 agcacaaatccaagatcatatactcaggccaccatgtgtggcctcctgtcccaaagtaca 470
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 807 agcacaaatccaagatcatatactcaggccaccaagtgtggcctcctgtcccaaagtaca 748
Query: 471 gattgtgagatattgggataaaccctggttagatggggagaggcaaatgtcagcctaggt 530
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 747 gattgtgagatattgggataaaccctggttagatggggaggggcaaatatcagcctaggt 688
Query: 531 caagaggttccgagagctgagaaacgggttagcccaccacaagagtgatgacttcttctg 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caagaggttccgagagctgagaaacgggttagcccaccacaagagtgatgacttcttctg 628
Query: 591 accaatccctgaggataacctgctacttcctcctttcctcagagtgcatgcctgact 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 accaatccctgaggataacctgctacttcctcctttcctcagagtgcatgcctgact 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
