Query= MSMg01no535_a03.b1 MSMg01no535_a03.b1 CHROMAT_FILE:
MSMg01no535_a03.b1 PHD_FILE: MSMg01no535_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:42 2005
(643 letters)
>mm_chr19_59905457_59906499
Length = 1043
Score = 1236 bits (639), Expect = 0.0
Identities = 639/639 (100%)
Strand = Plus / Plus
Query: 5 gaattcaacacaagcttccaaatatctcccctccctccccctcactccctctgctaactg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacacaagcttccaaatatctcccctccctccccctcactccctctgctaactg 264
Query: 65 tagatacagtgttactgtccatctcctgctacacatttttcctgccagttatgggaccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagatacagtgttactgtccatctcctgctacacatttttcctgccagttatgggaccac 324
Query: 125 caacttgggcccaatctcctcaaacttagatcgatggaaacactacaccaaaccacagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caacttgggcccaatctcctcaaacttagatcgatggaaacactacaccaaaccacagca 384
Query: 185 agttaccacacagagaaacccaaacacacacacctttcagtccagttagttactccactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttaccacacagagaaacccaaacacacacacctttcagtccagttagttactccactt 444
Query: 245 cctcttagcatgatcacatttccctgtgttcatcctctatctgtcccactaggttgccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctcttagcatgatcacatttccctgtgttcatcctctatctgtcccactaggttgccag 504
Query: 305 gaggatagtgactccctggaccactactgtgttttcaagcctaggtcctacattggagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaggatagtgactccctggaccactactgtgttttcaagcctaggtcctacattggagta 564
Query: 365 ttgaaattcatttttaaattactgatggtgcatcatctgcctctggatacctgtaacctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgaaattcatttttaaattactgatggtgcatcatctgcctctggatacctgtaacctt 624
Query: 425 gagtgacaagcacttataataatattaaaactgatttgagggctgagaagataggtctat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagtgacaagcacttataataatattaaaactgatttgagggctgagaagataggtctat 684
Query: 485 cggtaaagcacttgccttgcaagcattaggatctgaattctattcttgaaagaaagagag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cggtaaagcacttgccttgcaagcattaggatctgaattctattcttgaaagaaagagag 744
Query: 545 agagagagaatgaatgctgggtatggtgctgcttttctgtaatcccagcactgaggagat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agagagagaatgaatgctgggtatggtgctgcttttctgtaatcccagcactgaggagat 804
Query: 605 tcagacaggcagctctcgggttcataagacaggttcagc 643
|||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcagacaggcagctctcgggttcataagacaggttcagc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_a03.g1 MSMg01no535_a03.g1 CHROMAT_FILE:
MSMg01no535_a03.g1 PHD_FILE: MSMg01no535_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:42 2005
(569 letters)
>mm_chr19_60056532_60057499
Length = 968
Score = 1093 bits (565), Expect = 0.0
Identities = 568/569 (99%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 1 acaactacaaagcttatgtttgctttgctattattaatacaataagaggtttgactttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 acaactacaaagcttatgtttgctttgctattattaatacaataagaggtttgactttga 709
Query: 61 ccctgggattgcaaacgtggaaaacattaacagtattatattgacatgtcagagcctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ccctgggattgcaaacgtggaaaacattaacagtattatattgacatgtcagagcctctc 649
Query: 121 ttttttctgcattaaactgaagcttctgataagtatggaagagtccctgtggcaccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttttttctgcattaaactgaagcttctgataagtatggaagagtccctgtggcaccaaat 589
Query: 181 aaaactaaacaattcatatggactaagatcaaggaagtctagtgggctcaaagtttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 aaaactaaacaattcatatggactaagatcaaggaagtctagtgggctcaaagtttccag 529
Query: 241 ctcttcaataaagagaagcctgttggggaccactggcagttattaatgtttcaaaactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ctcttcaataaagagaagcctgttggggaccactggcagttattaatgtttcaaaactat 469
Query: 301 aatttaagaaatcattccttttaaaagtaaatactaatctctgagaaaagtctgtccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aatttaagaaatcattccttttaaaagtaaatactaatctctgagaaaagtctgtccttt 409
Query: 361 gtaataaactacatgggaagggtttcaaaaacatttcagattcctactgataaaatgtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtaataaactacatgggaagggtttcaaaaacatttcagattcctactgataaaatgtct 349
Query: 421 tcatagcattgatttggtcattttgctgaaaccactacaggtttaaactgtctgagggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tcatagcattgatttggtcattttgctgaaaccactacaggtttaaactgtctgagggtg 289
Query: 481 cattaggaggccacggttgcttcagtgtgatgtaagcatgtctgttacgacgacagtaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cattaggaggccacggttgcttcagtgtgatgtaagcatgtctgttacgacgacagtaaa 229
Query: 541 tacgtcatagaacattttttttttcttag 569
|||||||||||||| ||||||||||||||
Sbjct: 228 tacgtcatagaaca-tttttttttcttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space: 535522
Effective search space used: 535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
