TTTATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACAGAGATTCCACTGTTTTCTTAACAAGTGCACAAGTCAGTT
GAAGTCCCAGGCCTCTCAGGTAAAGGGTGACTAGTTGCCACTAAGACTGA
GCAGAGGTTAGTGCTAACTTAGTAACATGGTTATCACTGAGAATTTTCCT
GGTAATATGTTTCTTCACATGTTTAGTCAATTTTAGTATATTTAGTGTAT
GTGATCAAGGATTTGCTTGACGTCTATTGTGCATGGTCAGTGGGCTGCAG
ATATGGCTTGTTTAGCATTTTAAGTGAGTGAAAAACAGATTATAAAACAT
CACTCAGTATTGGTAAGGAATTTCAAAACCTGCATCCTACATAGGATGCT
TCAGTCTATCTCCATCGATCTTATGACATACTCCTATCACATCAAATCAT
TGCCAGGCTAGTGATGATGTGCATCACAGTGTAACCACAAATAAAGTCAT
TGTCACACTCTATTATTCAAGGAATACAGACAAAAAGGAAAGTATGCATG
CATGATAGATGTACTTACTACTCATGGAATCCCCCAACATTGCTCTCTTT
TATCCTCTTATGTACACACAAAATATGCATCTGCATATTCAACATATATG
TGTTTGGCAGCAGAGATCCTATGTGACTCCCAACCTACGATACTTATATT
TATATTTATCCCTACACCCCAACACATAAAATCACATTTCTTTTTACTCC
TTTCAAAAATACCCCTTATGATCTA

GGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGAAAAATAACTTCATTCCAGATTATAGTGATGG
ATGTTACTCAGTGATCACTGGGACAGGGAAGAAATAAAGAAAAAAATTAA
AGACTTTTTAAAATTCAATGAAAATGAACAACAGCATACTCAACCTTATG
GGACACAATGAAAGTCACTGTTATGAGGAAATTTCATAGCATTATGTTCA
TTCATAAAGAAATTTGAGAGAGCTCAATTTAGCAACTTAAAAGCACACCT
GAAATCTCTAGAACAAAAGAATAAGCACACCCAAGAGGAGTATACAGCAG
AAAATAAACAAATTCATGGCTGATATTAATAATTTAAAAACAAAGAGAAA
AATTTAACCAATAAAACCAATAGCTATTTCTTTGAGAAAATCAACGAGAC
AGAAAAACCCTTAGCACAACTAGCTACAAGACAGAAAGACAATATAGACA
ATATTCAATTCTCAAAATCAGAAATCCAAAGAATCACTAGGTCTTACTTC
AAAAGTCTGTACTCCACACAATTGGAAAATGTGAATAGTATGGATGATTT
TACTGATAGACACCACTTACAAAAGTTAAATCAAGACCAGATAAAAATTT
TATATAGCCTATGACTCCTAAGAAAGAAGGGAAAAACACAAAGCCCAGGG
CCAGTTGTTCTAGAGCAGAATTGTACTAGAATTTCAAAGAAAAGTTATGC
CATCCTCCTCCAAA

Query= MSMg01no536_h12.b1 MSMg01no536_h12.b1 CHROMAT_FILE:
MSMg01no536_h12.b1 PHD_FILE: MSMg01no536_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:34 2005
         (500 letters)



>mm_chr19_20261912_20262810
          Length = 899

 Score =  886 bits (458), Expect = 0.0
 Identities = 487/498 (97%), Gaps = 5/498 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacagagattc--cactgttttcttaacaagtgcacaagtcagttgaagtcccag 62
           |||||||||||||  |  |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 699 gaattcacagaga--caacactgttttcttaacaagggcacaagtcagttgaagtcccag 642

                                                                       
Query: 63  gcctctcaggtaaagggtgactagttgccactaagactgagcagaggttagtgctaactt 122
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gcctctcagg-caagggtgactagttgccactaagactgagcagaggttagtgctaactt 583

                                                                       
Query: 123 agtaacatggttatcactgagaattttcctggtaatatgtttcttcacatgtttagtcaa 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agtaacatggttatcactgagaattttcctggtaatatgtttcttcacatgtttagtcaa 523

                                                                       
Query: 183 ttttagtatatttagtgtatgtgatcaaggatttgcttgacgtctattgtgcatggtcag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttttagtatatttagtgtatgtgatcaaggatttgcttgacgtctattgtgcatggtcag 463

                                                                       
Query: 243 tgggctgcagatatggcttgtttagcattttaagtgagtgaaaaacagattataaaacat 302
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tggcctgcagatatggcttgtttagcattttaagtgagtgaaaaacagattataaaacat 403

                                                                       
Query: 303 cactcagtattggtaaggaatttcaaaacctgcatcctacataggatgcttcagtctatc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cactcagtattggtaaggaatttcaaaacctgcatcctacataggatgcttcagtctatc 343

                                                                       
Query: 363 tccatcgatcttatgacatactcctatcacatcaaatcattgccaggctagtgatgatgt 422
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 342 tccatcgatcttatgacatactcctatcacatcaaatcattgccagtctagtgatgatgt 283

                                                                       
Query: 423 gcatcacagtgtaaccacaaataaagtcattgtcacactctattattcaaggaatacaga 482
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 282 gcatcacagtgtaaccacaaagaaagtcagtgtcacactctattattcaaggaatacaga 223

                             
Query: 483 caaaaaggaaagtatgca 500
           ||||||||||||||||||
Sbjct: 222 caaaaaggaaagtatgca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 899
Length adjustment: 10
Effective length of query: 490
Effective length of database: 889
Effective search space:   435610
Effective search space used:   435610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)