Query= MSMg01no537_g21.b1 MSMg01no537_g21.b1 CHROMAT_FILE:
MSMg01no537_g21.b1 PHD_FILE: MSMg01no537_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:48 2005
(642 letters)
>mm_chr19_41633987_41635029
Length = 1043
Score = 1189 bits (615), Expect = 0.0
Identities = 632/638 (99%), Gaps = 1/638 (0%)
Strand = Plus / Plus
Query: 1 gagctttattgctacaaattgaaaagctatcttataaaatgatgacatttttcttacatg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 gagctttattgctacaaattgaaaagctatcttacaaaatgatgacatttttcttacatg 260
Query: 61 attcaactaattgaagggttaaactaaaaaaaa-catgatgaaccattgctttaagatat 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 attcaactaattgaagggttaaactaaaaaaaaacatgatgaaccattgctttaagatat 320
Query: 120 ttggttacttgataaatacttgggtcatatgctttatcattttcttttcattattaaatt 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ttggttacttgataaatacttgggtcatatgctttatcgttttcttttcattattaaatt 380
Query: 180 agcaatgtcttagtgctcacccaggggcaaggcgtggagatgtgcacacactaccttcaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaatgtcttagtgctcacccaggggcaaggcgtggagatgtgcacacactaccttcaa 440
Query: 240 actgtttcagttcatcacttggaacactacctttgctgtaatttcatttaaaattttcta 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtttcagttcgtcacttggaacactacctttgctgtaatttcatttaaaattttcta 500
Query: 300 agggtagaatttgctctcaccaacaagtgagattatagccttatctcatggaggacccgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggtagaatttgctctcaccaacaagtgagattatagccttatctcatggaggacccgc 560
Query: 360 tcccttcttactcaggagcagtcagggtacatttcataaacaatggaggatgcctcattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccttcttactcaggagcagtcagggtacatttcataaacaatggaggatgcctcattt 620
Query: 420 cagcaagcttcagtttctttatagttttcagtggttttatagaagtggtcatgtattaac 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcaagcttcagtttgtttatagttttcagtggttttatagaagtggtcatgtattaac 680
Query: 480 caacaactgagtattgttgcagccattagttctaaggaatctaagctgtgcttcctggga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caacaactgagtattgttgcagccattagttctaaggaatctaagctgtgcttcctggga 740
Query: 540 gtcagagcacagagagcaatgtgcattagtaattatggtgtggctaanatgctgcttaca 599
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 gtcagagcacagagagcaatgtgcattagtaattatggtgtggctaaaatgctgcttaca 800
Query: 600 ctttcagccttgataatttctatatagatgaaggatct 637
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctttcagccttgataatttctatatagatgaaggatct 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_g21.g1 MSMg01no537_g21.g1 CHROMAT_FILE:
MSMg01no537_g21.g1 PHD_FILE: MSMg01no537_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:48 2005
(648 letters)
>mm_chr19_41772743_41773794
Length = 1052
Score = 909 bits (470), Expect = 0.0
Identities = 496/512 (96%), Gaps = 14/512 (2%)
Strand = Plus / Minus
Query: 1 aatctctccctagggtgctccacagttaggcagcctaagggca----cagagtttttttt 56
|||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 507 aatcactccctagggtgctccacagttaggcagcctaagggcacagtcagag-----ttt 453
Query: 57 -----aaaaatcctttaatttgactataacaaggatgatggcagatcagagccatcaggg 111
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaaaaaaaaatcctttaatttgactataacaaggatgatggcagatcagagccatcaggg 393
Query: 112 ggctgagcctcaagggaggggttcagagaacctgggctcgtgctgggggtcacattttag 171
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 392 ggctgagcctcaagggaggggttcagagaacctgggctggtgctgggggtcacattttag 333
Query: 172 ctggaccaggaagtgcatagggccttccttctcagcctccagcacagtgcctaccaagta 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctggaccaggaagtgcatagggccttccttctcagcctccagcacagtgcctaccaagta 273
Query: 232 agactctgagcttctagacccatgccacggtttgcaaaatagccccctctcctctcttac 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agactctgagcttctagacccatgccacggtttgcaaaatagccccctctcctctcttac 213
Query: 292 tacgttttagaatttttatatcgtgataacgtataataaactttaccgactgagccattt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tacgttttagaatttttatatcgtgataacgtataataaactttaccgactgagccattt 153
Query: 352 aaaatgcacagagctgcagtggtgagtgtcttcacactgttacaccacagagctctacaa 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aaaatgcacagagctgcagtggtgagtgtcttcacactgttacaccacagagctctacaa 93
Query: 412 tattttcacttcataaaactggaacttcacaacccatcaagcagtaactccccaccctcc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tattttcacttcataaaactggaacttcacaacccatcaagcagtaactccccaccctcc 33
Query: 472 cttcctccacccctggcaacagctgtctgtaa 503
||||||||||||||||||||||||||||||||
Sbjct: 32 cttcctccacccctggcaacagctgtctgtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1052
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1042
Effective search space: 664796
Effective search space used: 664796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
