TGGCGGCCGCTATACGATCACTATTCGGAGAGGATCCGCGGAATTCACGA
CTTGGGCTGAGCCCAGAACCTTTCTCTTTTTTTTTTGGTTCTAATTGTTC
CTAGTCCTAGACCTGGAAGCTTCCAGCCTCTGTATAAGCTAATCTTCCAA
ACTGACTGATTCAATCCAGCTTTTCTCAGGTTCTGGCTGCATTGCTCTGC
TTGGCCTCATACTAACATTAGCAATCAGTTCTAATCTTCTGGCTCCTTCA
TTTTCTCTGGCTCGTTCTGCCTTCATCTGTGTCTAGGTTCTTCTTTCTGA
AACCTGCCTCTATAAAACTGTTCTAAACACACATCCTACATCACCCCTGT
CTCTCTGTGAGACCCCAACTTAAAGCGTTTCTCCCTGAAAGGTAAAGCCC
CTAAAATATTCCCCCAAGCTTGTTTTCCCTGATCTCTAAATATACAGCCA
GAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTCTA
TACCTTATAACCAGAGATGTGATAATTGTAAAAAGACCTAGCCAGGTGCT
TGCTTGGCTCCCTGTGCCAAGGACACAGAGATAAATTCCACAAAGAAGAG
CTACAACTCACTCCCTACTACTCCTCATGCCTTGTAATTTTACCAAGGAC
ATCCGCCAGAGAAGAACTGTAGCCAAACTCCTCCCAACTCTTCCCAAATC
TCCTTCCAACTCCTCCCAACTCCTCCCAATTCCTCACTTN

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATATTAGATATTGGTGATGTACACCTGGATTGTT
GTCAGACATAATGTTGAAATTGCTAGTAAAGACTATAACTGCTCATGTGA
TTATAGACCCAGAACTTGGAAGGCGGAGGGGGGTGGGTTAGAGAAGGAGA
CAGACACATAGAAGAGAAAAACAGAAAGAGAGATTTTTTAATTACAAAGT
TTGATTTTAACCTTTGGGTAATTTGTTGGTACCATTTAGATGAGAAGGTG
ATTGTACAGTTTGTGTTGAGGAATGAATGGAATATTCATCTCATTCTATT
CTTGAAATCCTCTGAAGCTTTCATCCTCTGGAGAACTATTTATATCTAAT
TCTGTCTCTTCACACTGTATTTTCTTTTGCCTACAGCAGAATTAATATTG
CATCAAAATGGTCAAACTTGTTAAGTTCTGTCTTCATATGGGTCATGTGT
GTCTGTAATATTTTAAGTTTTGGTTCTATCCTACTACCCCAAAACTTGTG
CTACCCTGTTATGAAAAGTATTTATCTAAATATTGGATAAGTCCTTGTGA
CTATGAGACATGAAGCTGCATTCCTTTGAGTCTTCAAAAGTTCAAGTTGT
TGATTATGCGCAGGCTATCTTCAAATAAGTAATTTCCAATAACTGAATCT
CAATTCTATTTGATATAGTGGGTGATATAAGCATATACTGACTCTTA

Query= MSMg01no538_c11.g1 MSMg01no538_c11.g1 CHROMAT_FILE:
MSMg01no538_c11.g1 PHD_FILE: MSMg01no538_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:44 2005
         (572 letters)



>mm_chr19_50092036_50093007
          Length = 972

 Score = 1062 bits (549), Expect = 0.0
 Identities = 567/573 (98%), Gaps = 2/573 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atattagatattggtgatgtacacctggattgttgtcagacataatgttgaaattgctag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 atattagatattggtgatgtacacctggattgttgtcagacataatgttgaaattgctag 713

                                                                       
Query: 61  taaagactataactgctcatgtgattataga-cccagaacttggaaggcggaggggggtg 119
           ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 712 taaagactataactgctcatgtgattata-atcccagaacttggaaggcggaggggggtg 654

                                                                       
Query: 120 ggttagagaaggagacagacacatagaagagaaaaacagaaagagagattttttaattac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggttagagaaggagacagacacatagaagagaaaaacagaaagagagattttttaattac 594

                                                                       
Query: 180 aaagtttgattttaacctttgggtaatttgttggtaccatttagatgagaaggtgattgt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aaagtttgattttaacctttgggtaatttgttggtaccatttagatgagaaggtgattgt 534

                                                                       
Query: 240 acagtttgtgttgaggaatgaatggaatattcatctcattctattcttgaaatcctctga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 acagtttgtgttgaggaatgaatggaatattcatctcattctattcttgaaatcctctga 474

                                                                       
Query: 300 agctttcatcctctggagaactatttatatctaattctgtctcttcacactgtattttct 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 473 agctttcatcctctggagaactatttatatctaattctgtctcttcacactgtagtttct 414

                                                                       
Query: 360 tttgcctacagcagaattaatattgcatcaaaatggtcaaacttgttaagttctgtcttc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttgcctacagcagaattaatattgcatcaaaatggtcaaacttgttaagttctgtcttc 354

                                                                       
Query: 420 atatgggtcatgtgtgtctgtaatattttaagttttggttctatcctactaccccaaaac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atatgggtcatgtgtgtctgtaatattttaagttttggttctatcctactaccccaaaac 294

                                                                       
Query: 480 ttgtgctaccctgttatgaaaagtatttatctaaatattggataagtccttgtgactatg 539
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttgtgctaccctgttatgaaaaatatttatctaaatattggataagtccttgtgactatg 234

                                            
Query: 540 agacatgaagctgcattcctttgagtcttcaaa 572
           ||||| |||||| ||||||||||||||||||||
Sbjct: 233 agacaagaagctacattcctttgagtcttcaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)