NATCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGAGGATC
CGCGGAATTCTCACCTGTTCCATACCAAATGGCCAGAGAAGCACCCGAAA
AAATGTTCAACATTCCTTAATCATCCAGGGAAATGGCAAATCAAAACAAC
CCTGAAATTCCACCTCACACAAGTCAAAATGGGCTAAAATCAAAAATTCA
GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGC
AGTTCCTCAGAAAATTGGACATAGTACCACCAGAGGATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTATGAAGGACACATG
GTCCACTATGTTCATAGCAGCCTTATTTATAATATCCAGAAACTGGAAAG
AACCCAGATGCCCCTCAACAGAGGAATGGATACAGACAATGTTGTACATT
TACACAATGGGAGTACTCCTCATCTATTAAAAAGAATGAATTTATGAAAT
TCCTTAGCAAAAGGATGGACCTGGAGGGCATTCTCCTGAATTGAGGAAAC
ACAATTCTCAAAGGGAACTCACACTATTTTGTTCTTCGCTGATAATGGGA
AATTTAATTCCCAAAACTTAAGGATTCCCTCATGATTAATAGAATTCCAT
TTTTGCTTAAACAACTTTGAAAACTCAATGAAAGATATGGAAGACCCAAT
AGGTGTGGTAACACCTTGTGGCCCCCCTTTCTTTCTAAAA

TATGCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCCTTGAGACCCACCCTCC
CTTTCAGTTTCCTGCCACAGGCATGCCTCCAACTGCCAGTCAGCACATGG
CTGCGAGCATATGCCAGAATGAGAGCGTAAAAAACCAAAGTAGGTGGGAA
GGTTTTTATAGATTAATCTTAGAAATGGTTCACCACTTCTGCTCTTTTTC
ATTTCTTAGACACTGCTCACTAGGTCCCATTCAGTTAGATAAAAACAAAA
CAAAACAAAACAAAACAAAACTAAACAAAACAAAACAGATTGGTGTGGAG
AAGAAATGGTAGGAACCACTGATCATCAGTAGGAACTCCCAGAAATATTT
CTAAATAAATGATAGAGTAAAAAAAAAAAGGGGATTGAGGAAATATAAAT
AAAACTTACGTATTTTAATACCATAAAACACTGGCCCAGCAACTGTGGAA
TAATTGTTTTCAAACATGCATGGATCATTTTTCAGATTTAGTTTCATCTC
TGCCCATGAAGCAAATTGTGATACATTTTAAGCATTAAATAATGTATCGT
CCTATGCATTGGAAGTAATGTAGAAATCAATAACAAAAGACAAACTGGAT
GTCTGCCAATATTGAACTATGAAACAGTATTCTTTTAAATATTTGCCATG
CTAAGGAAAAGTATAATCAGTAGACTTTAGAAAATATTTTAACTGACTAT
AAATAN

Query= MSMg01no544_m17.g1 MSMg01no544_m17.g1 CHROMAT_FILE:
MSMg01no544_m17.g1 PHD_FILE: MSMg01no544_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:35 2005
         (622 letters)



>mm_chr19_27093240_27094260
          Length = 1021

 Score = 1064 bits (550), Expect = 0.0
 Identities = 597/624 (95%), Gaps = 20/624 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttccttgagacccaccctccctttcagtttcctgccacaggcatgcctccaactgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 agttccttgagacccaccctccctttcagtttcctgccacaggcatgcctccaactgcca 778

                                                                       
Query: 61  gtcagcacatggctgcgagcatatgccagaatgagagcgtaaaaaaccaaagtaggtggg 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 777 gtcagcacatggctgcgagcatatgccagaatgagagcataaaaaaccaaagtaggtggg 718

                                                                       
Query: 121 aaggtttttatagattaatcttagaaatggttcaccacttctgctctttttcatttctta 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 717 aaggtttttatagattaatcttagaaatggttcaccactactgctctttttcatttctta 658

                                                                       
Query: 181 gacactgctcactaggtcccattcagttagataaaaacaaaacaaaacaaaacaaaacaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct: 657 gacactgctcactaggtcccattcagttagataaaaacaaaacaaaaca----------- 609

                                                                       
Query: 241 aactaaacaaaacaaaacagattggtgtggagaagaaatggtaggaaccactgatcatca 300
               |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 608 ----aaacaaaacaaaacagattggtgtggagaacaaatggtaggaaccactgatcatca 553

                                                                       
Query: 301 gtaggaactcccagaaatatttctaaataaatgatagagtaaaaaaaaaaa--ggggatt 358
           ||||||||| ||||||||||||||||||||||||||||||   ||||||||  |||||||
Sbjct: 552 gtaggaacttccagaaatatttctaaataaatgatagagt---aaaaaaaaggggggatt 496

                                                                       
Query: 359 gaggaaatataaataaaacttacgtattttaataccataaaacactggcccagcaactgt 418
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaggagatataaataaaacttacgtattttaataccataaaacactggcccagcaactgt 436

                                                                       
Query: 419 ggaataattgttttcaaacatgcatggatcatttttcagatttagtttcatctctgccca 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 435 ggaataattgttttcaaacatgcatggatcatttttcagatttagtttcatctctgtcca 376

                                                                       
Query: 479 tgaagcaaattgtgatacattttaagcattaaataatgtatcgtcctatgcattggaagt 538
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgaagtaaattgtgatacattttaagcattaaataatgtatcgtcctatgcattggaagt 316

                                                                       
Query: 539 aatgtagaaatcaataacaaaagacaaactggatgtctgccaatattgaactatgaaaca 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aatgtagaaatcaataacaaaagacaaactggatgtctgccaatattgaactatgaaaca 256

                                   
Query: 599 gtattcttttaaatatttgccatg 622
           ||||||||||||||||||||||||
Sbjct: 255 gtattcttttaaatatttgccatg 232


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space:   618732
Effective search space used:   618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)