TACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGTTTATATAATTTATTTATTTTTATTTTATGTGTAATGGGTAG
GTGCTCTTTGCCTCTGCAAGTCTGTGTACCACGTGCAGGCAGTACCAACA
GGCTGGATAAGGACATGACTTCTGGAAACAGATGGCTGCAAGCTACTGTG
TTGGTGCTGGGTTCTGAGAATCAAACTCCGGTCCTCTGGAAGAGCAAAGA
GTGCTCTTAACCACTGAGGCATTGCTCCAGCCCCCTGAAACTTTGTTTTA
TTTGTTTTGAAGATTAAGAGGTGCTTTAAACTGACAGACAAAATGCTTAA
TTTTATTTAAATGTTTAAAATGCGTATGTTTAAAAATGCAACTGTGTGAA
ATAGCTACTTTGTTAACAGGCATTACTTCCCAAAGTTATAATCCTTGTAG
TAAGACCATTTAAAATTTGTTCTCTTAGGTTTTTTAGGGTGGACTGTAAT
ATATCATTTCAACCACTTTCCATGTTACACAACAGAGCTTCCAAATTTAT
TCCCACTCTCTACCTGAAATTTTGAATTCTTCAGTCAACATTATTTTTGT
ATATGCAGATGAATCAAATAATGATAAAGATACTGACACTGATCGTAGTT
GTGGCTGCGATCAGCTGTCCTACAATTAACATAGTCGCTCAAGCACTCCT
GTTCATTTGTCTGAGAAGCTTACGA

CACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAAATGAATGTGATGGCTCT
ACTTGCTTTCTTATGTGTACAGGTTGAGGACCCCAGCCTGTGGAATGGTA
CAGCCCATATTCATGGTGAACCGATCATTCCTCCTTTGTAAAATGTTTGT
GAAAATGCCCTAAAATACATACCCAGAGGTTTGCCTCCTAGGTGATTCTA
AATTGAACCAACAATGAATAATAGTCATTACACGCGTGTGTAAACTTCAC
AGTCTCTTATAATCAATGTTATTGAACACAACTACGTGTGCAGGGAGTGT
GGAGGGCACCAGAATAATTCCCCCCAGGGGAGCACAGAGTAGCCTGGCTG
CTTGAGCTGTCCTTCAAAGAATGGTAGAGAAGCAACCAGAAAAGCCTCAG
AGAGTCACAGAAGGCACAGATGCTGCGCAGCTGCAGACTCAAGGCTAAAG
TCAAAACAGAGGCATTCATAACTGTGTGGCTGCAGCCATCCAGCCATTGA
ACACGCCCAAGGAGAGTTAACAGCAAGCGTCAGAACTGTTATGTGTGTGA
ATCTGTGCGCTCTATCAGCATTCTGTTGACAGACTTGCNAAGAGAGGGTA
TCAGGGCCCTGTTCCTGTAGAGTACCCATAGCCAGAATCAAATCGGAACT
CTAGCATGCAGATAAGATGAGCTAAAN

Query= MSMg01no548_l12.g1 MSMg01no548_l12.g1 CHROMAT_FILE:
MSMg01no548_l12.g1 PHD_FILE: MSMg01no548_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:43 2005
         (603 letters)



>mm_chr19_28758318_28759320
          Length = 1003

 Score = 1098 bits (568), Expect = 0.0
 Identities = 591/603 (98%), Gaps = 7/603 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agagaaatgaatgtgatggctctacttgctttcttatgtgtacaggttgaggaccccagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 agagaaatgaatgtgatggctctacttgctttcttatgtgtacaggttggggaccccagc 260

                                                                       
Query: 61  ctgtggaatggtacagcccatattcatggtgaaccgatcattcctcctttgtaaaatgtt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ctgtggaatggtacagcccatattcatggtgaaccgatcattcctcctttgtaaaacgtt 320

                                                                       
Query: 121 tgtgaaaatgccctaaaatacatacccagaggtttgcctcctaggtgattctaaattgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgaaaatgccctaaaatacatacccagaggtttgcctcctaggtgattctaaattgaa 380

                                                                       
Query: 181 ccaacaatgaataatagtcattacacgcgtgtgtaaacttcacagtctcttataatcaat 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ccaacaatgaataatagtcattacacgcgtgtgtaaagttcacagtctcttataatcaat 440

                                                                       
Query: 241 gttattgaacacaactacgtgtgcagggagtgtggagggcaccagaataattccccccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttattgaacacaactacgtgtgcagggagtgtggagggcaccagaataattccccccag 500

                                                                       
Query: 301 gggagcacagagtagcctggctgcttgagctgtccttcaaagaatggtagagaagcaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggagcacagagtagcctggctgcttgagctgtccttcaaagaatggtagagaagcaacc 560

                                                                       
Query: 361 agaaaagcctcagagagtcacagaaggcacagatgctgcgcagctgcagactcaaggcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaaagcctcagagagtcacagaaggcacagatgctgcgcagctgcagactcaaggcta 620

                                                                       
Query: 421 aagtcaaaacagaggcattcataactgtgtggctgcagccatccagccattgaacacgcc 480
           |||||||||||||||||||||||||||||||||||||||||||||||||       ||||
Sbjct: 621 aagtcaaaacagaggcattcataactgtgtggctgcagccatccagcca-------cgcc 673

                                                                       
Query: 481 caaggagagttaacagcaagcgtcagaactgttatgtgtgtgaatctgtgcgctctatca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 caaggagagttaacagcaagcgtcagaactgttatgtgtgtgaatctgtgcgctctatca 733

                                                                       
Query: 541 gcattctgttgacagacttgcnaagagagggtatcagggccctgttcctgtagagtaccc 600
           ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gcagtctgttgacagacttgcaaagagagggtatcagggccctgttcctgtagagtaccc 793

              
Query: 601 ata 603
           |||
Sbjct: 794 ata 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)