BAC Information

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BAC

Clone NameB6Ng01-001H03
Chromosome2 (Build37)
Map Location 51,448,193 - 51,449,368
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC227885, Rnd3, LOC666802, LOC666810
Downstream geneLOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb, LOC100041670, Arl5a, Cacnb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001H03.b
ACCDH839762
length1,165
definitionDH839762|Mus musculus domesticus DNA, BAC clone: B6Ng01-001H03, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgaatttagtttccataaattaacttccataatgattatca
taatggttacaatatgatcttgaaacagtaatacccaatagttacttata
aattccagaaaatgtcacccaagctctacctcctgttccatctcagggag
ggattgaaacctgaagtactgggttccgagcctcatcaggagctttggtg
ctgtgcatccatcttatacaagtatgtatttcctcgttgatggtattatt
ctaccaataagaaagaaaaaccaaaaatctcagaaggcagaaggaaaagt
ggctgggtggcggatagaaatcacagttagaaaactccatggtgtacata
gtccccattgtgacagctttcaacagagaggcatgcatcagctccagcat
agctcaagtcccataaatctgtgccggggaggaaagagttacacaaaaga
ctaagagtatccttgctgggaaataagcacagcggtcaaatcctaacaat
cttgctatccctttagagaaacatgtagaaatactgtcttggagcaggtt
agtgtaaaccaagtgcaggcagagcactgttgtggcctgttgtgctacaa
agcccactgctgggtcatctcaagacagatatttctttgactgtcttggt
ctgatcgttcctcacagataataggagttccctgtaagtgttcccttgag
aataaaattaaaaaggaaaactcagccccaagcccaatacaatctaaaga
taaaataaatgttagcttccctataatctccacctgaaagtggaggtgat
ggggtcagagatttaacaaggtgacttcagtcacatggccacttggtgag
ccccgctcctgaaggattggctctctttactccgctcacatatactctct
cgaaaaactgttaaaagtcctgattcaatcacctggttcatgaccttaac
caagaaggagcttcttgatttggtcagctgctgacatggttccagcaccc
agaagctgctgctgctgtcactgtcactggcatcaacagctgctgcgcag
ccatgcattctttcaatcatcaagtgataacccctgggcagcagggcttc
tgtctgtctgcccgccttgctgtttgcagttccatcatccctgcctggcc
ttctccattgttgta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51448193_51449368
seq2: B6Ng01-001H03.b_44_1208

seq1  GAATTCCAGTGACATTTAGTTAAAATAAAATAACTTCTAGAAAGATTATC  50
      |||||||| ||| ||||||||   ||||| ||||||| | || |||||||
seq2  GAATTCCACTGA-ATTTAGTTTCCATAAATTAACTTCCATAATGATTATC  49

seq1  TTTATAGTTACAATATGAAGTCGAAACAGTAATACCCAATAGTTACTTAT  100
       | || ||||||||||||  | ||||||||||||||||||||||||||||
seq2  ATAATGGTTACAATATGATCTTGAAACAGTAATACCCAATAGTTACTTAT  99

seq1  AAATTCCAGAAAATGTCCCCCAAGCTCTACCTCCTGTTCCATCTCAGGTA  150
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  AAATTCCAGAAAATGTCACCCAAGCTCTACCTCCTGTTCCATCTCAGGGA  149

seq1  ATCCATGAAGCCTGAGGTACTGGGTTCCGAGCCTCATCAGGAGCTTTGGT  200
           |||| ||||| ||||||||||||||||||||||||||||||||||
seq2  GGGATTGAAACCTGAAGTACTGGGTTCCGAGCCTCATCAGGAGCTTTGGT  199

seq1  GCTGTGCATACATCTTAGTTTAGTATGTATTTCCTCGTTGATAGCTATTA  250
      ||||||||| |||||||    ||||||||||||||||||||| | |||||
seq2  GCTGTGCATCCATCTTATACAAGTATGTATTTCCTCGTTGAT-GGTATTA  248

seq1  TTCTACCAACAAGAAAGAAAAACCAAAGATCTCAGAAGGCAGCAGGAAAT  300
      ||||||||| ||||||||||||||||| |||||||||||||| |||||| 
seq2  TTCTACCAATAAGAAAGAAAAACCAAAAATCTCAGAAGGCAGAAGGAAAA  298

seq1  GTCACTTGGCACCAGCTAGAAATCACAGTTAGAAAACTCCATGGTGTACA  350
      ||  || ||   | | ||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGGTGGCGGATAGAAATCACAGTTAGAAAACTCCATGGTGTACA  348

seq1  TAGTCCCCATTGTGACAGCTTTCAACAGAGAGGCATGCATCAGCTCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCCATTGTGACAGCTTTCAACAGAGAGGCATGCATCAGCTCCAGC  398

seq1  ATAGCTCAAGTCCCATAAATCTGTGCCGGGGAGGAAAGAGTTACACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCAAGTCCCATAAATCTGTGCCGGGGAGGAAAGAGTTACACAAAA  448

seq1  GACTAAGAGTATCCTTGCTGGGAAATAAGCACAGCGGTCAAATCCTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGAGTATCCTTGCTGGGAAATAAGCACAGCGGTCAAATCCTAACA  498

seq1  ATCTTGCTATCCCTTTAGAGAAACATGTAGAAATACTGTCTTGGAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCTATCCCTTTAGAGAAACATGTAGAAATACTGTCTTGGAGCAGG  548

seq1  TTAGTGTAAACCAAGTGCAGGCAGAGCACTGTTGTGGCCTGTTGTGCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTAAACCAAGTGCAGGCAGAGCACTGTTGTGGCCTGTTGTGCTAC  598

seq1  AAAGCCCACTGCTGGGTCATCTCAAGACAGATATTTCTTTGACTGTCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCACTGCTGGGTCATCTCAAGACAGATATTTCTTTGACTGTCTTG  648

seq1  GTCTGATCGTTCCTCACAGATAATAGGAGTTCCCTGTAAGTGTTCCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATCGTTCCTCACAGATAATAGGAGTTCCCTGTAAGTGTTCCCTTG  698

seq1  AGAATAAAATTAAAAAGGAAAACTCAGCCCCAAGCCCAATACAATCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAATTAAAAAGGAAAACTCAGCCCCAAGCCCAATACAATCTAAA  748

seq1  GATAAAATAAATGTTAGCTTCCCTATAATCTCCACCTGAAAGTGGAGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATAAATGTTAGCTTCCCTATAATCTCCACCTGAAAGTGGAGGTG  798

seq1  ATGGGGTCAGAGATTTAACAAGGTGACTTCAGTCACATGGCCACTTGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTCAGAGATTTAACAAGGTGACTTCAGTCACATGGCCACTTGGTG  848

seq1  AGCCCCGCTCCTGAAGGATTGGCTCTCTTTACTCCGCTCACATATACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCGCTCCTGAAGGATTGGCTCTCTTTACTCCGCTCACATATACTCT  898

seq1  CTCGACAAACTGTTAAAAGTCCTGATTCAATCACCTGGTTCATGACCTTA  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAAAACTGTTAAAAGTCCTGATTCAATCACCTGGTTCATGACCTTA  948

seq1  ACCAAGAAGGAGCCTCTTGATTTGGTCAGCTGCTGACAATGGTTCCAGCA  1000
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  ACCAAGAAGGAGCTTCTTGATTTGGTCAGCTGCTGAC-ATGGTTCCAGCA  997

seq1  CCCAGGAAGCTGCTGCTGCTGTCACTGTCACTGCCACCAACAGCTGCTGC  1050
      |||| |||||||||||||||||||||||||||| || |||||||||||| 
seq2  CCCA-GAAGCTGCTGCTGCTGTCACTGTCACTGGCATCAACAGCTGCTG-  1045

seq1  CGCAGCCATGCATTCTTTCAATCAATCAAGTGATAACCCCTGGGCAGCCT  1100
      ||||||||||||||||||||||| ||||||||||||||||||||||| | 
seq2  CGCAGCCATGCATTCTTTCAATC-ATCAAGTGATAACCCCTGGGCAG-CA  1093

seq1  TGGCTGTCTGTCTGTCTGCACCCTCTGCTGTTTGCAGTCTCCATCATCCC  1150
       |||| ||||||||||||| | |  ||||||||||||| ||||||||  |
seq2  GGGCT-TCTGTCTGTCTGCCCGCCTTGCTGTTTGCAGT-TCCATCAT--C  1139

seq1  CCTGCTTTGCTTTCTCCATTGTTGTA  1176
      ||||| | || |||||||||||||||
seq2  CCTGCCTGGCCTTCTCCATTGTTGTA  1165