BAC Information

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BAC

Clone NameB6Ng01-002I10
Chromosome2 (Build37)
Map Location 91,135,276 - 91,249,501
singlet/doubletdoublet
Overlap gene1110051M20Rik
Upstream geneOlfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289
Downstream geneLrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002I10.bB6Ng01-002I10.g
ACCDH840520DH840521
length8761,157
definitionDH840520|Mus musculus domesticus DNA, BAC clone: B6Ng01-002I10, 5' end.DH840521|Mus musculus domesticus DNA, BAC clone: B6Ng01-002I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,248,891 - 91,249,501)(91,135,276 - 91,136,447)
sequence
gaattctgcagcttgaactcaggtcatcaggcctgggagcagacaccttg
cccactgagtcatcttgctagccacagtttgattatttaattgttttgtt
ttatttttaaatcagttttggtaaattttcaattaagagctattcagata
tacttctgtttttctctttattcttactttttggggattccaattatata
aatgttagacctcctcagagtatctgtgtcttctgtactttctttttgca
ttttccttcattttgtcttttaggttttatttcacatattttatattcta
gttcatcaattgtttccttatttgtgtctaaatgctattatgcccaccta
ccaagttcttaattatgttattgagttcttcagtaatttccacttaggct
aggggatgacggtggctcttgtttggaatcctgccattcaggaatctgag
acaggaggatttcaaagcccacctaggcccagtattgagacaatttcaag
acctcattttcttttcctattttgtacttttcattgctagtttctttctt
tattcttgctttttaatttgctcagcccagtaaagcgtgggtgttataga
atccatatctggatttgctgtggcttatttattttatctctagtatatct
ttttaaattctattgttttactttgtagtctacttttccctttagttgag
tgatactcattggggtatgaaaagaactgtagagacaatggcattgaatg
tttgttatcttcctcagaagatttccatctgctttggcagatccctgggt
gctagcactcctggcttacctcagtcccatcaggtgctggaatgatttga
agctaagcaaaattgtccaggagagg
gaattctttgccacttcaaagtagacactcagcaaacacttgaaggatga
atgtaggtgtgagacactacttttcactcactatactacctatgcattta
gttttttttaaattaaaggcaatattcttagactgagtattacaatgtag
cctggagatatatatacacatacactgacctggaactcactatagagagt
aggctggcttcaaactcacaaaaatatgcttgttttcaccttcagggtga
cagaatcaaaggcccgcaccaccatgcctggcttccatctgtcagctgtt
ggccttcttttctgagtgtctggagccttactcaggaactcccctttgta
tctgtagcttgtgttccccgacatttccctctaataggctctgatctgac
ctcagttctccagtgcccttggagctgattaagttagaagggtcctgagc
tgtaattaacctgcatttccaagcagcacccaggtgcttctctctgtgtc
ctgatctctgggattaaagatgtgtagtaccatgctcagcctctacatta
aaattttaaaaattggataatttgatcatttttcagcctttgggttaaaa
tcaaatataaaattaggtaatttgttggggcattacggcatggattttac
atggattatctcattaaagctttaaaacaacgcattggctgacattagtt
ctgttttatacatgatgcttagagaagttaaataattgtttttgagacaa
ggtcttactatgtagctcaagctggcctggaactcactgtgtagcggggc
ttgcctgcaactcatagttattctctttccttaagagattattgcgactc
tagggcatgaaccacccaccatctctggcaaagttaaataactcaagacc
aacaggctttgttggtgattgacctgcattgaatccaggctgtgtgttct
agcacctgcttcccatccggctatgctgtgattctgggacatagacacca
gctcagatgacgttcctgattgcagtgactgtgtttgtaactggacttct
gtgggtttggagctgggacagcaccctgtcatattctacgcgagaatgac
aaactatgttttctattcggagaatccttgctagaggtgtggtctttggt
agggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91248891_91249501
seq2: B6Ng01-002I10.b_46_656 (reverse)

seq1  CAGATATGGATTCTATAACACCCACGCTTTACTGGGCTGAGCAAATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGGATTCTATAACACCCACGCTTTACTGGGCTGAGCAAATTAAA  50

seq1  AAGCAAGAATAAAGAAAGAAACTAGCAATGAAAAGTACAAAATAGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAATAAAGAAAGAAACTAGCAATGAAAAGTACAAAATAGGAAAA  100

seq1  GAAAATGAGGTCTTGAAATTGTCTCAATACTGGGCCTAGGTGGGCTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAGGTCTTGAAATTGTCTCAATACTGGGCCTAGGTGGGCTTTGA  150

seq1  AATCCTCCTGTCTCAGATTCCTGAATGGCAGGATTCCAAACAAGAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCCTGTCTCAGATTCCTGAATGGCAGGATTCCAAACAAGAGCCAC  200

seq1  CGTCATCCCCTAGCCTAAGTGGAAATTACTGAAGAACTCAATAACATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCATCCCCTAGCCTAAGTGGAAATTACTGAAGAACTCAATAACATAAT  250

seq1  TAAGAACTTGGTAGGTGGGCATAATAGCATTTAGACACAAATAAGGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTTGGTAGGTGGGCATAATAGCATTTAGACACAAATAAGGAAAC  300

seq1  AATTGATGAACTAGAATATAAAATATGTGAAATAAAACCTAAAAGACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGAACTAGAATATAAAATATGTGAAATAAAACCTAAAAGACAAA  350

seq1  ATGAAGGAAAATGCAAAAAGAAAGTACAGAAGACACAGATACTCTGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAAAATGCAAAAAGAAAGTACAGAAGACACAGATACTCTGAGGA  400

seq1  GGTCTAACATTTATATAATTGGAATCCCCAAAAAGTAAGAATAAAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAACATTTATATAATTGGAATCCCCAAAAAGTAAGAATAAAGAGAA  450

seq1  AAACAGAAGTATATCTGAATAGCTCTTAATTGAAAATTTACCAAAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGTATATCTGAATAGCTCTTAATTGAAAATTTACCAAAACTGA  500

seq1  TTTAAAAATAAAACAAAACAATTAAATAATCAAACTGTGGCTAGCAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATAAAACAAAACAATTAAATAATCAAACTGTGGCTAGCAAGAT  550

seq1  GACTCAGTGGGCAAGGTGTCTGCTCCCAGGCCTGATGACCTGAGTTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTGGGCAAGGTGTCTGCTCCCAGGCCTGATGACCTGAGTTCAAG  600

seq1  CTGCAGAATTC  611
      |||||||||||
seq2  CTGCAGAATTC  611

seq1: chr2_91135276_91136447
seq2: B6Ng01-002I10.g_69_1225

seq1  GAATTCTTTGCCACTTCAAAGTAGACACTCAGCAAACACTTGAAGGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCCACTTCAAAGTAGACACTCAGCAAACACTTGAAGGATGA  50

seq1  ATGTAGGTGTGAGACACTACTTTTCACTCACTATACTACCTATGCATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTGTGAGACACTACTTTTCACTCACTATACTACCTATGCATTTA  100

seq1  GTTTTTTTTAAATTAAAGGCAATATTCTTAGACTGAGTATTACAATGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTAAATTAAAGGCAATATTCTTAGACTGAGTATTACAATGTAG  150

seq1  CCTGGAGATATATATACACATACACTGACCTGGAACTCACTATAGAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGATATATATACACATACACTGACCTGGAACTCACTATAGAGAGT  200

seq1  AGGCTGGCTTCAAACTCACAAAAATATGCTTGTTTTCACCTTCAGGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCTTCAAACTCACAAAAATATGCTTGTTTTCACCTTCAGGGTGA  250

seq1  CAGAATCAAAGGCCCGCACCACCATGCCTGGCTTCCATCTGTCAGCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCAAAGGCCCGCACCACCATGCCTGGCTTCCATCTGTCAGCTGTT  300

seq1  GGCCTTCTTTTCTGAGTGTCTGGAGCCTTACTCAGGAACTCCCCTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTTTTCTGAGTGTCTGGAGCCTTACTCAGGAACTCCCCTTTGTA  350

seq1  TCTGTAGCTTGTGTTCCCCGACATTTCCCTCTAATAGGCTCTGATCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCTTGTGTTCCCCGACATTTCCCTCTAATAGGCTCTGATCTGAC  400

seq1  CTCAGTTCTCCAGTGCCCTTGGAGCTGATTAAGTTAGAAGGGTCCTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCTCCAGTGCCCTTGGAGCTGATTAAGTTAGAAGGGTCCTGAGC  450

seq1  TGTAATTAACCTGCATTTCCAAGCAGCACCCAGGTGCTTCTCTCTGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAACCTGCATTTCCAAGCAGCACCCAGGTGCTTCTCTCTGTGTC  500

seq1  CTGATCTCTGGGATTAAAGATGTGTAGTACCATGCTCAGCCTCTACATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTCTGGGATTAAAGATGTGTAGTACCATGCTCAGCCTCTACATTA  550

seq1  AAATTTTAAAAATTGGATAATTTGATCATTTTTCAGCCTTTGGGTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAAAATTGGATAATTTGATCATTTTTCAGCCTTTGGGTTAAAA  600

seq1  TCAAATATAAAATTAGGTAATTTGTTGGGGCATTACGGCATGGATTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATAAAATTAGGTAATTTGTTGGGGCATTACGGCATGGATTTTAC  650

seq1  ATGGATTATCTCATTAAAGCTTTAAAACAACGCATTGGCTGACATTAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTATCTCATTAAAGCTTTAAAACAACGCATTGGCTGACATTAGTT  700

seq1  CTGTTTTATACATGATGCTTAGAGAAGTTAAATAATTGTTTTTGAGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTATACATGATGCTTAGAGAAGTTAAATAATTGTTTTTGAGACAA  750

seq1  GGTCTTACTATGTAGCTCAAGCTGGCCTGGAACTCACTGTGTAGCGGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTACTATGTAGCTCAAGCTGGCCTGGAACTCACTGTGTAGCGGGGC  800

seq1  TTGCCTGCAACTCATAGTAATTCTCTTTCCTTAAGAGATTATTGCGACTC  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGCCTGCAACTCATAGTTATTCTCTTTCCTTAAGAGATTATTGCGACTC  850

seq1  TA-GGCATGAACCACCCACCATCTCTGGCAAAGTTAAATAACTCAAGACC  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCATGAACCACCCACCATCTCTGGCAAAGTTAAATAACTCAAGACC  900

seq1  AACAGGC-TTGTTGGTGATTGACCTGCATTGAATCCAGGGCTGTGTGGTT  948
      ||||||| ||||||||||||||||||||||||||||| |||||||| |||
seq2  AACAGGCTTTGTTGGTGATTGACCTGCATTGAATCCA-GGCTGTGT-GTT  948

seq1  CTAGCACCTGCTTCCCCATCCGGCTATGCTGTGATTCTGGGACATAGACA  998
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCTGCTT-CCCATCCGGCTATGCTGTGATTCTGGGACATAGACA  997

seq1  -CAGCTCAGGATGACGTTCCTGAATGGCAGTGACTGTGTCTGTAACTGGA  1047
       ||||||| ||||||||||||| || ||||||||||||| ||||||||||
seq2  CCAGCTCA-GATGACGTTCCTG-ATTGCAGTGACTGTGTTTGTAACTGGA  1045

seq1  CCTTCTGTGGGTTTGGAGCCTGGGGACCAGCACCCTGTGCATTATTCCTA  1097
       ||||||||||||||||| |||||   ||||||||||| || |||||   
seq2  -CTTCTGTGGGTTTGGAG-CTGGG--ACAGCACCCTGT-CA-TATTC--T  1087

seq1  ACGCAGAG-ATGACAAGACTATGTTTCCTATTCTGGGCAGATCCCTGGCT  1146
      |||| ||| ||||||| ||||||||| ||||||   | |||  ||| |||
seq2  ACGC-GAGAATGACAA-ACTATGTTTTCTATTC---GGAGAATCCTTGCT  1132

seq1  AGAGGTGTGGTCTTTGGTAAGGGAGA  1172
      |||||||||||||||||| |||||||
seq2  AGAGGTGTGGTCTTTGGT-AGGGAGA  1157