BAC Information

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BAC

Clone NameB6Ng01-002M19
Chromosome2 (Build37)
Map Location 106,893,083 - 107,069,263
singlet/doubletdoublet
Overlap geneFshb
Upstream geneLOC668765, Dcdc5, 9330126M15, C130023O10Rik, LOC677260, 2700007P21Rik, LOC383739
Downstream geneKcna4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002M19.bB6Ng01-002M19.g
ACCDH840714DH840715
length3501,024
definitionDH840714|Mus musculus domesticus DNA, BAC clone: B6Ng01-002M19, 5' end.DH840715|Mus musculus domesticus DNA, BAC clone: B6Ng01-002M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,893,083 - 106,893,432)(107,068,234 - 107,069,263)
sequence
tgggggcttagtgggaaacccacctgagaaacagctactttaataaagaa
tacagtgcaggaaggttcttgacagaggctcggggtatagtaatgaataa
ggaagttgaagatcaagagatgcttgtctgctgatgcggaatccccatga
cagtggcaattatggttgaggtgtcccagtggaggtacttggaagaaaac
ataggggatgaccagctcctgtgaccaaatgtgaagaacatcagcctgtg
ttgaagttgtcttctttactcattccatgaccattccagagaggccagtg
acttaagggcaaggggaagaaggctcagatggtgggtgggtgggtgggga

gaattcctttattagatggagagaaacagaactgagagcactgttaggac
atggtcccttcagataccagctaggtttttttttgtttgttttttgtttt
tttattttggggttgtgtttttttcttagcatcagggaaaatcacacatt
tttcaagtgagttgatatttcttttcttctttaaattatacattctttgg
agtgtccaaacttctaagcacctgtccaggctctgttcctaattaaaagc
aatgcctgttaaaaaatgaattcaccacttagctcctcacggatgaagga
aagggacataaaactataaagttgcctctcagagccctagcagatctagc
tgtttagtgttctctgacctgaagaaaaccaaacaaaagtaaaacagaac
agagagagagagagagagagagagagagagagagagagagagagagttct
agtctccagacacaattatctatcacataaggtgaggggtgaggtagaga
gagcagctatagggtcagaatattattacaactactgtggaggcatcaga
agagcctgacacagctaattcagccacagacaaacacagaaggtaagtga
gtcattggcactgactcaagacttttataaacagtgcagccaccaaaccc
agctgggtcacttgggcaaatctgtctgataaaaaagcaagtctatacag
gcagagagaacaagaagttactcgaaaagaatgagaagcaaacagccctc
ctcatctgcctaaacaagagggcagggcacctctggttagaagtgaggaa
gaggacacccagcagcaggccagaagaaggatttggtttcccttggtttc
tagtatcttagtatcctagtgggaagaattgaagagacacctgttaagga
gagaagacagcaagtatgttactctgtatcagagtctagctgactgatta
ggtttagatgacatctattcactccagagcatgctcatggtcgttcttgc
tttagaagaaacctatctttgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_106893083_106893432
seq2: B6Ng01-002M19.b_52_401

seq1  TGGGGGCTTAGTGGGAAACCCACCTGAGAAACAGCTACTTTAATAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTTAGTGGGAAACCCACCTGAGAAACAGCTACTTTAATAAAGAA  50

seq1  TACAGTGCAGGAAGGTTCTTGACAGAGGCTCGGGGTATAGTAATGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGCAGGAAGGTTCTTGACAGAGGCTCGGGGTATAGTAATGAATAA  100

seq1  GGAAGTTGAAGATCAAGAGATGCTTGTCTGCTGATGCGGAATCCCCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTGAAGATCAAGAGATGCTTGTCTGCTGATGCGGAATCCCCATGA  150

seq1  CAGTGGCAATTATGGTTGAGGTGTCCCAGTGGAGGTACTTGGAAGAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCAATTATGGTTGAGGTGTCCCAGTGGAGGTACTTGGAAGAAAAC  200

seq1  ATAGGGGATGACCAGCTCCTGTGACCAAATGTGAAGAACATCAGCCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGATGACCAGCTCCTGTGACCAAATGTGAAGAACATCAGCCTGTG  250

seq1  TTGAAGTTGTCTTCTTTACTCATTCCATGACCATTCCAGAGAGGCCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTGTCTTCTTTACTCATTCCATGACCATTCCAGAGAGGCCAGTG  300

seq1  ACTTAAGGGCAAGGGGAAGAAGGCTCAGATGGTGGGTGGGTGGGTGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGGCAAGGGGAAGAAGGCTCAGATGGTGGGTGGGTGGGTGGGGA  350

seq1: chr2_107068234_107069263
seq2: B6Ng01-002M19.g_68_1091 (reverse)

seq1  AAGCAAAGAGTGGTTTC-TCTAAAGGAAAGGAGCGACCATGAGGCATGCT  49
      |||||||||  |||||| ||||||| ||  || ||||||||| |||||||
seq2  AAGCAAAGATAGGTTTCTTCTAAAGCAA--GAACGACCATGA-GCATGCT  47

seq1  GTGGGGTGAATATGATGTCATCTAAACCTAATCAGTCAGCTAGACTCTGA  99
       ||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGAATA-GATGTCATCTAAACCTAATCAGTCAGCTAGACTCTGA  96

seq1  TACAGGGTCACATACTTGCTGTCTTTCTCTCCTTAACAGGTGTCTCTTCA  149
      ||||| || |||||||||||||| ||||||||||||||||||||||||||
seq2  TACAGAGTAACATACTTGCTGTC-TTCTCTCCTTAACAGGTGTCTCTTCA  145

seq1  ATTTCTTCCCCACTAGGATACTAGGATACTAGAAACCAAGGGAAACCAAA  199
      | ||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  A-TTCTT-CCCACTAGGATACTAAGATACTAGAAACCAAGGGAAACCAAA  193

seq1  TCCTTTCTTCTGGCCTGCTGCTGGGTGTCCTCCTTCCTCACTTCTAACCA  249
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCC-TTCTTCTGGCCTGCTGCTGGGTGTCCT-CTTCCTCACTTCTAACCA  241

seq1  GAGGTGCCCTGCCCTCTTGTTTAGGCAGATGAGGAGGGCTGTTTGCTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCCCTGCCCTCTTGTTTAGGCAGATGAGGAGGGCTGTTTGCTTCT  291

seq1  CATTCTTTTCGAGTAACTTCTTGTTCTCTCTGCCTGTATAGACTTGCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTTCGAGTAACTTCTTGTTCTCTCTGCCTGTATAGACTTGCTTT  341

seq1  TTTATCAGACAGATTTGCCCAAGTGACCCAGCTGGGTTTGGTGGCTGCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGACAGATTTGCCCAAGTGACCCAGCTGGGTTTGGTGGCTGCAC  391

seq1  TGTTTATAAAAGTCTTGAGTCAGTGCCAATGACTCACTTACCTTCTGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATAAAAGTCTTGAGTCAGTGCCAATGACTCACTTACCTTCTGTGT  441

seq1  TTGTCTGTGGCTGAATTAGCTGTGTCAGGCTCTTCTGATGCCTCCACAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTGGCTGAATTAGCTGTGTCAGGCTCTTCTGATGCCTCCACAGT  491

seq1  AGTTGTAATAATATTCTGACCCTATAGCTGCTCTCTCTACCTCACCCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAATAATATTCTGACCCTATAGCTGCTCTCTCTACCTCACCCCTC  541

seq1  ACCTTATGTGATAGATAATTGTGTCTGGAGACTAGAA--CTCTCTCTCTC  597
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  ACCTTATGTGATAGATAATTGTGTCTGGAGACTAGAACTCTCTCTCTCTC  591

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCTGTTTTACTTTTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCTGTTTTACTTTTG  641

seq1  TTTGGTTTTCTTCAGGTCAGAGAACACTAAACAGCTAGATCTGCTAGGGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTCTTCAGGTCAGAGAACACTAAACAGCTAGATCTGCTAGGGC  691

seq1  TCTGAGAGGCAACTTTATAGTTTTATGTCCCTTTCCTTCATCCGTGAGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGGCAACTTTATAGTTTTATGTCCCTTTCCTTCATCCGTGAGGA  741

seq1  GCTAAGTGGTGAATTCATTTTTTAACAGGCATTGCTTTTAATTAGGAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTGGTGAATTCATTTTTTAACAGGCATTGCTTTTAATTAGGAACA  791

seq1  GAGCCTGGACAGGTGCTTAGAAGTTTGGACACTCCAAAGAATGTATAATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGACAGGTGCTTAGAAGTTTGGACACTCCAAAGAATGTATAATT  841

seq1  TAAAGAAGAAAAGAAATATCAACTCACTTGAAAAATGTGTGATTTTCCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGAAAAGAAATATCAACTCACTTGAAAAATGTGTGATTTTCCCT  891

seq1  GATGCTAAGAAAAAAACACAACCCCAAAATAAAAAAACAAAAAACAAACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAAGAAAAAAACACAACCCCAAAATAAAAAAACAAAAAACAAACA  941

seq1  AAAAAAAACCTAGCTGGTATCTGAAGGGACCATGTCCTAACAGTGCTCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCTAGCTGGTATCTGAAGGGACCATGTCCTAACAGTGCTCTC  991

seq1  AGTTCTGTTTCTCTCCATCTAATAAAGGAATTC  1030
      |||||||||||||||||||||||||||||||||
seq2  AGTTCTGTTTCTCTCCATCTAATAAAGGAATTC  1024