BAC Information

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BAC

Clone NameB6Ng01-003B14
Chromosome2 (Build37)
Map Location 111,855,624 - 111,983,743
singlet/doubletdoublet
Overlap geneOlfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310
Downstream geneOlfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003B14.bB6Ng01-003B14.g
ACCDH840918DH840919
length1,1441,012
definitionDH840918|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B14, 5' end.DH840919|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,982,588 - 111,983,743)(111,855,624 - 111,856,636)
sequence
gaattcatccagctaaagatctttattttgtatattcctgttgctgtaca
gatactgagcatttcacaaggcatgaattaaggtggttgtgcagattaga
aagagctatctctgtctctgaggaccagtgccaaagagaagtttccatca
tttgtgatgataacaaagcatgttcagtgtgtgagatttcagcagttgtt
gtcactttcatatggcatctgacagaaatcatattttaggttcgatttac
tgcttttcagtactttcagaaaccagaaattctttagcaaaacatgatca
ggtctgcagagaatacttgaagaagcactgcacagtagatatttaaaaca
ttaagttgaagagacttttcaaatagtttttttgtaaattaaaaatattt
aataaaatatatatttaattaagctacaactacattatttatttcttcca
ttttctcctttgtatccctctcatgtctgacaactcttccataccaaatt
caagggttcagttcttttactattttcacatgtacatataaattatacac
acacacacacatgtatacatactatataaaatgtacatacaacatgctga
gtctattaaacattgtttgcatgtatatttgtctaaagaagtctactcag
tacagaataaaaatgttttatcctccagaatgtttaacttcaatttgaat
ctcttaagctgtcaatgaaacttaaagccctagcaaagagtctcctcatt
gcaaccttcatttccttatttctcagtgtatagatgacaggattcataga
aggagtgataatggcatcgaaaattgctaaaaatttatctatgggtaaag
tcgggaaaggccacacatagacataatgcaaggaccaaagaagaaaacga
ccacagtgatgtgagctgagagagtggagagggccttggaggaagcacct
gaggagggttacgaactgtgaccaggatgagatgttagacacaatcagga
tgaggagtgccatggagatgaatcacttgttggcagtgaccaggactcag
tcttgtttgtgttcttgtacatgcgagtttgatgacgagaaatcacagtt
aagctgtcaatttttattagctcacgaaagggttattacaacaa
gaattcactcacatgcctgcatccttgaagatctgtagcgtagaacattc
tttgaaaacagtctttggtcattagtcttgtccaagctttgttagttcct
gattgttgatcaagaaatacaaggggaaaaatcaccacacacatgctgca
aatcaacctaacttctgaaattcatgaaacaaaacctttgctacatccca
ttcatcaaagcaacctcaagcgccaagtcagttttaagactggaaaaata
gattccaactattggcaggaagagttacagaatatttttttataaatcag
ccagagatattatgactattttgagttgtattagttagccaaatctccat
tataattaagttgtgccttgaacttgtgactctcctgttgtatcctcctg
agctctggagatataggttgatgttatagcaccttgcttggtgtaatgtg
agtctaaactttcctgagacagcatccttacaacttctcagctgtcttcc
atgtctgctattttttctcatatacagcagattcgtaataagcctacaaa
atattttctttctttcttacttgtttgtctctcccctaaccagtgtgttt
gtgtgtttatgctacgtcattgtgtggagttcagaggacaacttgaagta
gttgggtgtctctgtccataatttgagtttaaggtaatggcctcaggtta
ttcagcttaagcacaaatgtctctctacctgcacaccacccttaaaatgt
cttctcggggattttaaaccttgatacgacaaacatgtcatgatttggcc
acatgaccttctagaatctcgtgtgccttcttctgaaggggtttctaatt
ctcaaataagtttcaggaacataaactagaagcacagcctggttactgaa
gttgaaaaagcttcctcagtaatctatggcagaaaatactcaacataaag
actcagactttgtatacaaatagatatagagatagagatagagatagagg
taggaggtagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111982588_111983743
seq2: B6Ng01-003B14.b_48_1191 (reverse)

seq1  TTGTTGTAAATTTACCCTTTTGTGGAGCTAAT-AAAATGGACAGCTTTTA  49
      |||||||||  | ||||||| || |||||||| ||||| |||||| || |
seq2  TTGTTGTAA--TAACCCTTTCGT-GAGCTAATAAAAATTGACAGC-TTAA  46

seq1  CTGTGATTTTCCTCGGTTCATCAAACTCGCATGTACA--GACACATAC-A  96
      |||||||||  ||||  ||||||||||||||||||||   ||||| || |
seq2  CTGTGATTT--CTCG--TCATCAAACTCGCATGTACAAGAACACAAACAA  92

seq1  GACTGGAGTTCCTGGTCACTGCCAACAGTGGTTTCATCTCCATGGCCACC  146
      |||| ||| ||||||||||||||||||   | ||||||||||||| ||| 
seq2  GACT-GAG-TCCTGGTCACTGCCAACAAGTGATTCATCTCCATGG-CAC-  138

seq1  TTCTTCATCCTGATTGTGTCTTACATCTTCATCCTGGTCACAGTTCGTAA  196
       || ||||||||||||||||| ||||| |||||||||||||||||||| |
seq2  -TCCTCATCCTGATTGTGTCTAACATC-TCATCCTGGTCACAGTTCGT-A  185

seq1  ACACTCCTCAGGTGCTTCCTCCAAGGCCCTCTCCACTCTCTCAGCTCACA  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTCAGGTGCTTCCTCCAAGGCCCTCTCCACTCTCTCAGCTCACA  235

seq1  TCACTGTGGTCGTTTTCTTCTTTGGTCCTTGCATTATTGTCTATGTGTGG  296
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCACTGTGGTCGTTTTCTTCTTTGGTCCTTGCATTA-TGTCTATGTGTGG  284

seq1  CCTTTCCCGACTTTACCCATAGATAAATTTTTAGCAATTTTCGATGCCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCGACTTTACCCATAGATAAATTTTTAGCAATTTTCGATGCCAT  334

seq1  TATCACTCCTTCTATGAATCCTGTCATCTATACACTGAGAAATAAGGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCCTTCTATGAATCCTGTCATCTATACACTGAGAAATAAGGAAA  384

seq1  TGAAGGTTGCAATGAGGAGACTCTTTGCTAGGGCTTTAAGTTTCATTGAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTTGCAATGAGGAGACTCTTTGCTAGGGCTTTAAGTTTCATTGAC  434

seq1  AGCTTAAGAGATTCAAATTGAAGTTAAACATTCTGGAGGATAAAACATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGAGATTCAAATTGAAGTTAAACATTCTGGAGGATAAAACATTT  484

seq1  TTATTCTGTACTGAGTAGACTTCTTTAGACAAATATACATGCAAACAATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGTACTGAGTAGACTTCTTTAGACAAATATACATGCAAACAATG  534

seq1  TTGAATAGACTCAGCATGTTGTATGTACATTTTATATAGTATGTATACAT  596
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGACTCAGCATGTTGTATGTACATTTTATATAGTATGTATACAT  584

seq1  GTGTGTGTGTGTGTATAATTTATATGTACATGTGAAAATAGTAAAAGAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTATAATTTATATGTACATGTGAAAATAGTAAAAGAAC  634

seq1  TGAACCCTTGAATTTGGTATGGAAGAGTTGTCAGACATGAGAGGGATACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTTGAATTTGGTATGGAAGAGTTGTCAGACATGAGAGGGATACA  684

seq1  AAGGAGAAAATGGAAGAAATAAATAATGTAGTTGTAGCTTAATTAAATAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAAATGGAAGAAATAAATAATGTAGTTGTAGCTTAATTAAATAT  734

seq1  ATATTTTATTAAATATTTTTAATTTACAAAAAAACTATTTGAAAAGTCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTAAATATTTTTAATTTACAAAAAAACTATTTGAAAAGTCTC  784

seq1  TTCAACTTAATGTTTTAAATATCTACTGTGCAGTGCTTCTTCAAGTATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTAATGTTTTAAATATCTACTGTGCAGTGCTTCTTCAAGTATTC  834

seq1  TCTGCAGACCTGATCATGTTTTGCTAAAGAATTTCTGGTTTCTGAAAGTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGACCTGATCATGTTTTGCTAAAGAATTTCTGGTTTCTGAAAGTA  884

seq1  CTGAAAAGCAGTAAATCGAACCTAAAATATGATTTCTGTCAGATGCCATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGCAGTAAATCGAACCTAAAATATGATTTCTGTCAGATGCCATA  934

seq1  TGAAAGTGACAACAACTGCTGAAATCTCACACACTGAACATGCTTTGTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGACAACAACTGCTGAAATCTCACACACTGAACATGCTTTGTTA  984

seq1  TCATCACAAATGATGGAAACTTCTCTTTGGCACTGGTCCTCAGAGACAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAAATGATGGAAACTTCTCTTTGGCACTGGTCCTCAGAGACAGA  1034

seq1  GATAGCTCTTTCTAATCTGCACAACCACCTTAATTCATGCCTTGTGAAAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTCTTTCTAATCTGCACAACCACCTTAATTCATGCCTTGTGAAAT  1084

seq1  GCTCAGTATCTGTACAGCAACAGGAATATACAAAATAAAGATCTTTAGCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTATCTGTACAGCAACAGGAATATACAAAATAAAGATCTTTAGCT  1134

seq1  GGATGAATTC  1156
      ||||||||||
seq2  GGATGAATTC  1144

seq1: chr2_111855624_111856636
seq2: B6Ng01-003B14.g_68_1079

seq1  GAATTCACTCACATGCCTGCATCCTTGAAGATCTGTAGCGTAGAACATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACATGCCTGCATCCTTGAAGATCTGTAGCGTAGAACATTC  50

seq1  TTTGAAAACAGTCTTTGGTCATTAGTCTTGTCCAAGCTTTGTTAGTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAACAGTCTTTGGTCATTAGTCTTGTCCAAGCTTTGTTAGTTCCT  100

seq1  GATTGTTGATCAAGAAATACAAGGGGAAAAATCACCACACACATGCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTGATCAAGAAATACAAGGGGAAAAATCACCACACACATGCTGCA  150

seq1  AATCAACCTAACTTCTGAAATTCATGAAACAAAACCTTTGCTACATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACCTAACTTCTGAAATTCATGAAACAAAACCTTTGCTACATCCCA  200

seq1  TTCATCAAAGCAACCTCAAGCGCCAAGTCAGTTTTAAGACTGGAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAAAGCAACCTCAAGCGCCAAGTCAGTTTTAAGACTGGAAAAATA  250

seq1  GATTCCAACTATTGGCAGGAAGAGTTACAGAATATTTTTTTATAAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAACTATTGGCAGGAAGAGTTACAGAATATTTTTTTATAAATCAG  300

seq1  CCAGAGATATTATGACTATTTTGAGTTGTATTAGTTAGCCAAATCTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATATTATGACTATTTTGAGTTGTATTAGTTAGCCAAATCTCCAT  350

seq1  TATAATTAAGTTGTGCCTTGAACTTGTGACTCTCCTGTTGTATCCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAAGTTGTGCCTTGAACTTGTGACTCTCCTGTTGTATCCTCCTG  400

seq1  AGCTCTGGAGATATAGGTTGATGTTATAGCACCTTGCTTGGTGTAATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGGAGATATAGGTTGATGTTATAGCACCTTGCTTGGTGTAATGTG  450

seq1  AGTCTAAACTTTCCTGAGACAGCATCCTTACAACTTCTCAGCTGTCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAACTTTCCTGAGACAGCATCCTTACAACTTCTCAGCTGTCTTCC  500

seq1  ATGTCTGCTATTTTTTCTCATATACAGCAGATTCGTAATAAGCCTACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTATTTTTTCTCATATACAGCAGATTCGTAATAAGCCTACAAA  550

seq1  ATATTTTCTTTCTTTCTTACTTGTTTGTCTCTCCCCTAACCAGTGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTTTCTTTCTTACTTGTTTGTCTCTCCCCTAACCAGTGTGTTT  600

seq1  GTGTGTTTATGCTACGTCATTGTGTGGAGTTCAGAGGACAACTTGAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTATGCTACGTCATTGTGTGGAGTTCAGAGGACAACTTGAAGTA  650

seq1  GTTGGGTGTCTCTGTCCATAATTTGAGTTTAAGGTAATGGCCTCAGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGTCTCTGTCCATAATTTGAGTTTAAGGTAATGGCCTCAGGTTA  700

seq1  TTCAGCTTAAGCACAAATGTCTCTCTACCTGCACACCACCCTTAAAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTAAGCACAAATGTCTCTCTACCTGCACACCACCCTTAAAATGT  750

seq1  CTTCTCGGGGATTTTAAACCTTGATACGACAAACATGTCATGATTTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCGGGGATTTTAAACCTTGATACGACAAACATGTCATGATTTGGCC  800

seq1  ACATGACCTTCTAGAATCTCGTGTGCCTTCTTCTGAAGGGGTTTCTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACCTTCTAGAATCTCGTGTGCCTTCTTCTGAAGGGGTTTCTAATT  850

seq1  CTCAAATAAGTTTCAGGAACATAAACTAGAAGCACAGCCTGGTTACTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATAAGTTTCAGGAACATAAACTAGAAGCACAGCCTGGTTACTGAA  900

seq1  GTTGAAAAAAGCTTCCTCAGTAATCTATGGCAAGAAAATACTCAACATAA  950
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTG-AAAAAGCTTCCTCAGTAATCTATGGC-AGAAAATACTCAACATAA  948

seq1  AGACTCAGACTTTGTATACAAATAGATATAGAGATAGAGATAGAGATAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGACTTTGTATACAAATAGATATAGAGATAGAGATAGAGATAGA  998

seq1  GGTA-GAGGTAGAG  1013
      |||| |||||||||
seq2  GGTAGGAGGTAGAG  1012