BAC Information

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BAC

Clone NameB6Ng01-003P07
Chromosome2 (Build37)
Map Location 174,865,080 - 174,866,310
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
Downstream geneLOC545487, LOC100043760, LOC100043761, LOC620790, LOC665001, LOC100043762, LOC100043763, LOC100043764, LOC100043914, LOC100043915, LOC668009, LOC100038953, LOC620804, LOC100039000, LOC100043126, LOC100039017, LOC100039036, LOC100039049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003P07.bB6Ng01-003P07.g
ACCDH841506DH841507
length1,2231,216
definitionDH841506|Mus musculus domesticus DNA, BAC clone: B6Ng01-003P07, 5' end.DH841507|Mus musculus domesticus DNA, BAC clone: B6Ng01-003P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacacataaaaagactcatcagtgtaaacaatgtgagaaatat
ttcatgtgtgccaattgtatttgcaggcatgaaagaagttgtactggaga
acaaccctctgattttattcagtgccgtaaagtctttgcatatcatagtt
atagtcaaaggcatgaaagaacacaaacaggagagaaattgtatgaatgt
aaccaatgtggtaaagcctttggctacagcagtgctctccaacatcatga
acgaattcataaaggagagaaaccctatgaatgtgatcaatgtggtaaag
gctttgtacaaagcaatcatctccaaatacataagagaacacatacagga
gagaaaccctatgaatgtaaccaatgtggtaaaggctttgcaggaaggag
tgacctccaaatatataaacaaacacatacaggagagaaaacatatgaat
gtaaccaatgtggtaaagcctttgtacaaaacagacatctgcagatacat
aaaggaacacatacaggagagaaaccctatgagtttaaccaatgtagtaa
agcctttcccaaaagaagtactcttggatatcataaatggactcatatag
gagagaaacactatgaagtcaaccaatttggtaaagcctttgcaggaagc
agtgatctccaaatacataaataaacacacataataaagaaaccttttaa
atataatctgtgtggcaaagctttttcaaaaatcagtagtcttcacatac
ataaaataacacatagttcagagaaaccatttgactgtaaccagtgtgat
acaggtttttcacaaagcagtggtcaccaaaatcataaaagaatacatag
aggagaggaattttaaaatgttagcaatgtggttttaatccttttccaca
aagctgtgacctccaaatatataaaggaacacatacaggagagaaaccct
atgaatatcggcaaagttctgaagacattctactttataatatcttcaaa
tacataaaagaacatgtactgagagaaatcctctgaatgtaactacatgg
taaagtcttttgtacaaaaaaagtcatctttacacactctgtagaaccta
tgaataaaggaaatatggttaacttttggcagttgcagtactctccaagg
aaataaaagaaaaacatattccaagaaaacacatattaatgtcatcattg
tagccttgtagttgcaatcatct
gaattccaggacactcagggctacacagaaaaaccctttcttgaataact
attaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaagagaagagaagagaagagaagagaagag
aagagaagagaagagaagagaaagaaattcaagcctttgatctcatatat
ataaaacaaagacacacagaggggtgattgattgagaaaaatgctttaaa
gaaaattcaaaaatgtctatgccagggcaaataatcaggatctttgaaca
tgggctacatagggattctgggattgttcagcctggtatgacaaatgtag
agcctggaaatggccttgtacagtacatagaaaggaattcaaatgaagtg
aaatgcataaatgaataaatataggccttgatctcaggtaggtcaaagag
caggggatgaattaggcatataataataataatcacttatattgtattca
ttgcttttagttattttaattataaaaatgcatatcgttatgagtttcat
ggtaataccaaattcttctgggagtggggaaaagctattaaattaatcca
gtctctaccttaaatgatttccagttactggacaagtgacatgctatttt
gggagagaggctctatgtttgctttgacaggaaaagagaaaggtctttgg
aggtcttccagagtattaggatcagatgagacaggggaaaacccacaaga
ttttggctagggaaaagaaaatttcaagaaaattaaactggacaagaccc
ctctgcctcctgaagttttttttcagagaattgcttccaaaactacttca
ggaatagctggagatttcagatgacctcatttcatccatcctttcagagt
gattcagtcagcacttcagtcaaatcctgtgccctctgaacagataggcc
tggatagagaaactaaagctaattttcttttttgtgtgttcttttttttt
ccgagacagggttctctgtgtagctctgctgccctggactcactctgtag
agtactactcagctctaaaaggattgatatgaactctaggcaatgatgac
tgagcatcatctggagtgagtaactattcaagactccacaaatgtactca
gtaatgatagccgacctagatctgtggaagccaatatggcattacagtgg
gcgtgtactacgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_174865080_174866310
seq2: B6Ng01-003P07.b_47_1269

seq1  GAATTCATACACATAAAAAGACTCATCAGTGTAAACAATGTGAGAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACATAAAAAGACTCATCAGTGTAAACAATGTGAGAAATAT  50

seq1  TTCATGTGTGCCAATTGTATTTGCAGGCATGAAAGAAGTTGTACTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGTGCCAATTGTATTTGCAGGCATGAAAGAAGTTGTACTGGAGA  100

seq1  ACAACCCTCTGATTTTATTCAGTGCCGTAAAGTCTTTGCATATCATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTCTGATTTTATTCAGTGCCGTAAAGTCTTTGCATATCATAGTT  150

seq1  ATAGTCAAAGGCATGAAAGAACACAAACAGGAGAGAAATTGTATGAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAAAGGCATGAAAGAACACAAACAGGAGAGAAATTGTATGAATGT  200

seq1  AACCAATGTGGTAAAGCCTTTGGCTACAGCAGTGCTCTCCAACATCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATGTGGTAAAGCCTTTGGCTACAGCAGTGCTCTCCAACATCATGA  250

seq1  ACGAATTCATAAAGGAGAGAAACCCTATGAATGTGATCAATGTGGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTCATAAAGGAGAGAAACCCTATGAATGTGATCAATGTGGTAAAG  300

seq1  GCTTTGTACAAAGCAATCATCTCCAAATACATAAGAGAACACATACAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTACAAAGCAATCATCTCCAAATACATAAGAGAACACATACAGGA  350

seq1  GAGAAACCCTATGAATGTAACCAATGTGGTAAAGGCTTTGCAGGAAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTATGAATGTAACCAATGTGGTAAAGGCTTTGCAGGAAGGAG  400

seq1  TGACCTCCAAATATATAAACAAACACATACAGGAGAGAAAACATATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCAAATATATAAACAAACACATACAGGAGAGAAAACATATGAAT  450

seq1  GTAACCAATGTGGTAAAGCCTTTGTACAAAACAGACATCTGCAGATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAATGTGGTAAAGCCTTTGTACAAAACAGACATCTGCAGATACAT  500

seq1  AAAGGAACACATACAGGAGAGAAACCCTATGAGTTTAACCAATGTAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACACATACAGGAGAGAAACCCTATGAGTTTAACCAATGTAGTAA  550

seq1  AGCCTTTCCCAAAAGAAGTACTCTTGGATATCATAAATGGACTCATATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCCCAAAAGAAGTACTCTTGGATATCATAAATGGACTCATATAG  600

seq1  GAGAGAAACACTATGAAGTCAACCAATTTGGTAAAGCCTTTGCAGGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAACACTATGAAGTCAACCAATTTGGTAAAGCCTTTGCAGGAAGC  650

seq1  AGTGATCTCCAAATACATAAATAAACACACATAATAAAGAAACCTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTCCAAATACATAAATAAACACACATAATAAAGAAACCTTTTAA  700

seq1  ATATAATCTGTGTGGCAAAGCTTTTTCAAAAATCAGTAGTCTTCACATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTGTGTGGCAAAGCTTTTTCAAAAATCAGTAGTCTTCACATAC  750

seq1  ATAAAATAACACATAGTTCAGAGAAACCATTTGACTGTAACCAGTGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAACACATAGTTCAGAGAAACCATTTGACTGTAACCAGTGTGAT  800

seq1  ACAGGTTTTTCACAAAGCAGTGGTCACCAAAATCATAAAAGAATACATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTTTCACAAAGCAGTGGTCACCAAAATCATAAAAGAATACATAG  850

seq1  AGGAGAGGAATTTTAAAATGTTAGCAATGTGGTTTTAATCCTTTTCCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGAATTTTAAAATGTTAGCAATGTGGTTTTAATCCTTTTCCACA  900

seq1  AAGCTGTGACCTCCAAATATATAAAGGAACACATACAGGAGAGAAACCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGACCTCCAAATATATAAAGGAACACATACAGGAGAGAAACCCT  950

seq1  ATGAATATCGGCAAAGTTCTGAAGACATTCTACTTTATAATTATCTTCAA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGAATATCGGCAAAGTTCTGAAGACATTCTACTTTATAA-TATCTTCAA  999

seq1  ATACATAAAAGAACATGTACTGGAGAGAAATCCTCTGAATGTAACTAACA  1050
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  ATACATAAAAGAACATGTACT-GAGAGAAATCCTCTGAATGTAACT-ACA  1047

seq1  TGGTAAAGTC-TTTGTAC-AAAACAGTCATCTTTACACACTCTGGTAGAA  1098
      |||||||||| ||||||| |||| ||||||||||||||||||| |||| |
seq2  TGGTAAAGTCTTTTGTACAAAAAAAGTCATCTTTACACACTCT-GTAG-A  1095

seq1  ACCTATGAATATAAGAAATATGGTAAACTTTTTGCAAGTTGCAGTACTCT  1148
      ||||||||||| | |||||||||| ||||||| || ||||||||||||||
seq2  ACCTATGAATAAAGGAAATATGGTTAACTTTTGGC-AGTTGCAGTACTCT  1144

seq1  CCAAGGAAATAAAAG-AAAACATATTCCACAGAAACAC-TATTAATGTCA  1196
      ||||||||||||||| |||||||||||||   |||||| |||||||||||
seq2  CCAAGGAAATAAAAGAAAAACATATTCCAAGAAAACACATATTAATGTCA  1194

seq1  TCAATGGGTAAAGGCTTTGTATGTTGCAATCATCT  1231
      ||| |  |||   || ||||| |||||||||||||
seq2  TCATT--GTA---GCCTTGTA-GTTGCAATCATCT  1223