BAC Information

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BAC

Clone NameB6Ng01-004G07
Chromosome2 (Build37)
Map Location 50,480,744 - 50,600,098
singlet/doubletdoublet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004G07.bB6Ng01-004G07.g
ACCDH841816DH841817
length1,063851
definitionDH841816|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G07, 5' end.DH841817|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,599,039 - 50,600,098)(50,480,744 - 50,481,593)
sequence
gaattcagatgaataatttctttggggggaaaagagagggaagtgactga
gaagaggcaggggaggggcccgagggttattggcactttttttttttaat
ttctgtggcattttctaaaagcatagtattttgcacaaaaatgttcctaa
atttatgtgtacagtcatggtaagggtatgtttttaacatgtgtcctcat
ttaaagtttaatttaaaagaattatttgcaagcaaggcctgaggaaatga
gtaagagtgaacacaaaacaaaagtgtacagtgtgtgcaatgtgtgcagt
gtggatagtgtatgcagtgtgtacggtatatggtatgtctagtatatgca
gtgtgtacagtgtatacagtatgtgtggtatgtacagtgtgtgcagtatg
cacagtgtgcagtatgtatagtgtgtgcagtatagcagagtttacagtgt
gcacagtgtgtagtgtgtacagtatgtgcagtatgtacattgtgtgcagt
gtgtacattttgtgcagtgtgcgcagtgtgcacagtgtacacaatgtatg
cagtgtgcacagtgtgtacagtgtgcacagtgtgtgcagtgtgcacagta
tgtgtggtgtgcagtatgtacagggtatgcagtgtgtgcagtgtgtgcaa
tgtgtacagtgtctacagtgtgtgcagtgtgcacagtatgtgcagtgtgt
gcagtgtatgcaatgcgtgcagtgtgcacagtgtatgtagtgtgcagtat
gtacagggtatgcagtgtgtgcagtgtgtataatattgcagtctgtacat
ttatctccagttttgctttctgatgtttcaattatttgcaaccaactaca
atagaaaaatatttatttggaaagttcaaaaatactgtaaatcagagttt
ctcaaactgtgaatcacaacttccttgggggagggggagtcaatgacact
tttcataagggtttttttatatcagaaagcacagattattaatatcttga
tttattacagctgcaacattgtgttttgaagcagcaacaataataatgct
tatggttggggga
gaattctgtgctgatttccaactttctggccccctttgtttatctgtagt
acatgccgctcctttgtttggaagaaaaagttcataatgatttatgggaa
acacgtttgagtttctagatcaggctacaggcctactttcataaacaagc
agaattttcggtgaaaattaacaaagaggaaaaggagggagggaatagcc
agaagaaaatattttgaattgtcttgatgcctgcaattctttgaaaatga
ttaataactcgataagatccaaatatagtgagttgtttactccctggctc
agaacacatttccattaactatgcaatcaacaggatgttttccttctgtc
ttttcctcatttgtgcttccccatcagaaattttgttaaaatagcccaga
gataagctgaacaatgtagcgtctcctctaagaaaattggctttgtctta
gcaggacactactgttttcagagtggctatgtcaaggtcattatagtttg
cacactgggcatagtgttttacactgtttcttccaccaaattttagaagc
tatcttccctgaggtgggggtgaggtgtcattctgggtcagtccgtgggc
taactggcaggaggaaatgggagaaggatccggggatgggatgcagtggg
attgggtggctgcttatttctgaaagtcttagccacctggaagatgactg
catttttaaatcaccatgcatgaagtgggggcagtctgtgggttttatgt
gggtagtgttctagttggaactgctgctgtaatgctgctgtgatggagtg
aggggaagacctggctcactgctggtaagtgtttctgaaaaccttgttct
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50599039_50600098
seq2: B6Ng01-004G07.b_46_1108 (reverse)

seq1  TCCCCCAACCAT-AGCATTATTTTTGTTGCTGCTTCATAACTACAATTTT  49
      |||||||||||| ||||||||| |||||||||||||| ||| ||||| ||
seq2  TCCCCCAACCATAAGCATTATTATTGTTGCTGCTTCAAAAC-ACAATGTT  49

seq1  GCTACTGTTATGAATCATAATATTAAT-ATCTGTGCTTTCTGATATTAGA  98
      ||  |||| || |||||  |||||||| |||||||||||||||||| | |
seq2  GCAGCTGTAATAAATCAAGATATTAATAATCTGTGCTTTCTGATATAAAA  99

seq1  CAAACCCTATG-AAAGTGTCATTTGACTCCCCCT-CCCCAAGGAAGTTGT  146
       || || |||| ||||||||| |||||||||||| |||||||||||||||
seq2  AAACCCTTATGAAAAGTGTCA-TTGACTCCCCCTCCCCCAAGGAAGTTGT  148

seq1  GATTCACAGTTTGAGAAACTCTGATTTACAGTATTTTTGAACTTTCC-AA  195
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GATTCACAGTTTGAGAAACTCTGATTTACAGTATTTTTGAACTTTCCAAA  198

seq1  TTAATATTTTTCTATTGTAGTTGGTTGCAAATAATTGAAACATCAGAAAG  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTCTATTGTAGTTGGTTGCAAATAATTGAAACATCAGAAAG  248

seq1  CAAAACTGGAGATAAATGTACAGACTGCAATATTATACACACTGCACACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGGAGATAAATGTACAGACTGCAATATTATACACACTGCACACA  298

seq1  CTGCATACCCTGTACATACTGCACACTACATACACTGTGCACACTGCACG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACCCTGTACATACTGCACACTACATACACTGTGCACACTGCACG  348

seq1  CATTGCATACACTGCACACACTGCACATACTGTGCACACTGCACACACTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATACACTGCACACACTGCACATACTGTGCACACTGCACACACTG  398

seq1  TAGACACTGTACACATTGCACACACTGCACACACTGCATACCCTGTACAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTGTACACATTGCACACACTGCACACACTGCATACCCTGTACAT  448

seq1  ACTGCACACCACACATACTGTGCACACTGCACACACTGTGCACACTGTAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACACCACACATACTGTGCACACTGCACACACTGTGCACACTGTAC  498

seq1  ACACTGTGCACACTGCATACATTGTGTACACTGTGCACACTGCGCACACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGCACACTGCATACATTGTGTACACTGTGCACACTGCGCACACT  548

seq1  GCACAAAATGTACACACTGCACACAATGTACATACTGCACATACTGTACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAATGTACACACTGCACACAATGTACATACTGCACATACTGTACA  598

seq1  CACTACACACTGTGCACACTGTAAACTCTGCTATACTGCACACACTATAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACACACTGTGCACACTGTAAACTCTGCTATACTGCACACACTATAC  648

seq1  ATACTGCACACTGTGCATACTGCACACACTGTACATACCACACATACTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCACACTGTGCATACTGCACACACTGTACATACCACACATACTGT  698

seq1  ATACACTGTACACACTGCATATACTAGACATACCATATACCGTACACACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGTACACACTGCATATACTAGACATACCATATACCGTACACACT  748

seq1  GCATACACTATCCACACTGCACACATTGCACACACTGTACACTTTTGTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACTATCCACACTGCACACATTGCACACACTGTACACTTTTGTTT  798

seq1  TGTGTTCACTCTTACTCATTTCCTCAGGCCTTGCTTGCAAATAATTCTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCACTCTTACTCATTTCCTCAGGCCTTGCTTGCAAATAATTCTTT  848

seq1  TAAATTAAACTTTAAATGAGGACACATGTTAAAAACATACCCTTACCATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAACTTTAAATGAGGACACATGTTAAAAACATACCCTTACCATG  898

seq1  ACTGTACACATAAATTTAGGAACATTTTTGTGCAAAATACTATGCTTTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACACATAAATTTAGGAACATTTTTGTGCAAAATACTATGCTTTTA  948

seq1  GAAAATGCCACAGAAATTAAAAAAAAAAAGTGCCAATAACCCTCGGGCCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCACAGAAATTAAAAAAAAAAAGTGCCAATAACCCTCGGGCCC  998

seq1  CTCCCCTGCCTCTTCTCAGTCACTTCCCTCTCTTTTCCCCCCAAAGAAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGCCTCTTCTCAGTCACTTCCCTCTCTTTTCCCCCCAAAGAAAT  1048

seq1  TATTCATCTGAATTC  1060
      |||||||||||||||
seq2  TATTCATCTGAATTC  1063

seq1: chr2_50480744_50481593
seq2: B6Ng01-004G07.g_67_917

seq1  GAATTCTGTGCTGATTTCCAACTTTCTGGCCCCCTTTGTTTATCTGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTGATTTCCAACTTTCTGGCCCCCTTTGTTTATCTGTAGT  50

seq1  ACATGCCGCTCCTTTGTTTGGAAGAAAAAGTTCATAATGATTTATGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCGCTCCTTTGTTTGGAAGAAAAAGTTCATAATGATTTATGGGAA  100

seq1  ACACGTTTGAGTTTCTAGATCAGGCTACAGGCCTACTTTCATAAACAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTTTGAGTTTCTAGATCAGGCTACAGGCCTACTTTCATAAACAAGC  150

seq1  AGAATTTTCGGTGAAAATTAACAAAGAGGAAAAGGAGGGAGGGAATAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCGGTGAAAATTAACAAAGAGGAAAAGGAGGGAGGGAATAGCC  200

seq1  AGAAGAAAATATTTTGAATTGTCTTGATGCCTGCAATTCTTTGAAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAATATTTTGAATTGTCTTGATGCCTGCAATTCTTTGAAAATGA  250

seq1  TTAATAACTCGATAAGATCCAAATATAGTGAGTTGTTTACTCCCTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACTCGATAAGATCCAAATATAGTGAGTTGTTTACTCCCTGGCTC  300

seq1  AGAACACATTTCCATTAACTATGCAATCAACAGGATGTTTTCCTTCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACATTTCCATTAACTATGCAATCAACAGGATGTTTTCCTTCTGTC  350

seq1  TTTTCCTCATTTGTGCTTCCCCATCAGAAATTTTGTTAAAATAGCCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTGTGCTTCCCCATCAGAAATTTTGTTAAAATAGCCCAGA  400

seq1  GATAAGCTGAACAATGTAGCGTCTCCTCTAAGAAAATTGGCTTTGTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCTGAACAATGTAGCGTCTCCTCTAAGAAAATTGGCTTTGTCTTA  450

seq1  GCAGGACACTACTGTTTTCAGAGTGGCTATGTCAAGGTCATTATAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACACTACTGTTTTCAGAGTGGCTATGTCAAGGTCATTATAGTTTG  500

seq1  CACACTGGGCATAGTGTTTTACACTGTTTCTTCCACCAAATTTTAGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGGGCATAGTGTTTTACACTGTTTCTTCCACCAAATTTTAGAAGC  550

seq1  TATCTTCCCTGAGGTGGGGGTGAGGTGTCATTCTGGGTCAGTCCGTGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCCTGAGGTGGGGGTGAGGTGTCATTCTGGGTCAGTCCGTGGGC  600

seq1  TAACTGGCAGGAGGAAATGGGAGAAGGATCCGGGGATGGGATGCAGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGCAGGAGGAAATGGGAGAAGGATCCGGGGATGGGATGCAGTGGG  650

seq1  ATTGGGTGGCTGCTTATTTCTGAAAGTCTTAGCCACCTGGAAGATGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTGGCTGCTTATTTCTGAAAGTCTTAGCCACCTGGAAGATGACTG  700

seq1  CATTTTTAAATCACCATGCATGAAGTGGGGGCAGTCTGTGGGTTTTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAATCACCATGCATGAAGTGGGGGCAGTCTGTGGGTTTTATGT  750

seq1  GGGTAGTGTTCTAGTTGGAACTGCTGCTGTAATGCTGCTGTGATGGAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTGTTCTAGTTGGAACTGCTGCTGTAATGCTGCTGTGATGGAGTG  800

seq1  AGGGGAAGACCTGGCTCACTGCTGGTAAGTG-TTCTGAAAACCTTGTTCT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGGGAAGACCTGGCTCACTGCTGGTAAGTGTTTCTGAAAACCTTGTTCT  850

seq1  T  850
      |
seq2  T  851