BAC Information

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BAC

Clone NameB6Ng01-005G02
Chromosome2 (Build37)
Map Location 8,923,088 - 9,101,037
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2, Itih5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005G02.bB6Ng01-005G02.g
ACCDH842531DH842532
length1,14761
definitionDH842531|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G02, 5' end.DH842532|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,923,088 - 8,924,235)(9,100,977 - 9,101,037)
sequence
gaattcctcgaagatttatgttacatgacagaacttatcctatatacata
caacaagggctcaataagtatttgttgatgtgaataagtataggtaatct
gactttatctacagaaatgatatgagatcctgtgatgagatggcttactg
gatgaaagctgattgcctgccctctctaggaccaacctactgagaagaga
gaaatgactcctaaaaattgtcttctgatctccacatatacactgtggta
caaaccaatgcaagataaaaaaaaaaggaatcattgaaaactaaataatc
tatacttgcaaatccattcttcatgaattcagactttagatctgccctaa
aacaattgaataccacacatgagaattatggatatgtaggtccataatgt
gaaggctgtaattgaatgagcttgtggacacatttgtagaggggatggag
agatgctaaggtctgaggatacaatagcagtcaatctagaaggaagcaga
gccatctgtccagcataaaaacacactgtgccccacagtctaggatgaga
aactaaaacttattttatgttgtaataatacctgagaaatactgaaatgc
agttgagtaagaaaaggagttaggttattgacaggggtagggatataagt
aagattcatgtattgaagttcactataggactaaggcaaaactctgaatt
cactggacgttttatagaggaaaatgtctttaaagtattcaatggtgatc
tgaacaagaaaatgttggctctaggttggctttaaactcacagaaatcct
gctgcctcagcgttccaacagctaatattacaaagtgtgctaccacccct
tgtcaattctgatttttcagcatgattttgtgttcagtattcagggaata
aatcaacttttttatacccttaaccaaactatagaggaaagcatgtgcct
agggtctgcaacttccaccaggtctgagactatccaccaggtctgcgact
gtcacagtctgtgctggtctgccaggtcggcgcctgttccacaagatctt
tgagttgcttaacaaagacttgtagaaatgatttggttgccttgaaggta
cttttgttacagttcccagtatggaaatttcctatggctttagaatc

tttctttttattcttctccctctgctctcactctctttttttttgagggg
ggggggttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8923088_8924235
seq2: B6Ng01-005G02.b_47_1193

seq1  GAATTCCTCGAAGATTTATGTTACATGACAGAACTTATCCTATATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGAAGATTTATGTTACATGACAGAACTTATCCTATATACATA  50

seq1  CAACAAGGGCTCAATAAGTATTTGTTGATGTGAATAAGTATAGGTAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGGCTCAATAAGTATTTGTTGATGTGAATAAGTATAGGTAATCT  100

seq1  GACTTTATCTACAGAAATGATATGAGATCCTGTGATGAGATGGCTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATCTACAGAAATGATATGAGATCCTGTGATGAGATGGCTTACTG  150

seq1  GATGAAAGCTGATTGCCTGCCCTCTCTAGGACCAACCTACTGAGAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGCTGATTGCCTGCCCTCTCTAGGACCAACCTACTGAGAAGAGA  200

seq1  GAAATGACTCCTAAAAATTGTCTTCTGATCTCCACATATACACTGTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACTCCTAAAAATTGTCTTCTGATCTCCACATATACACTGTGGTA  250

seq1  CAAACCAATGCAAGATAAAAAAAAAAGGAATCATTGAAAACTAAATAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAATGCAAGATAAAAAAAAAAGGAATCATTGAAAACTAAATAATC  300

seq1  TATACTTGCAAATCCATTCTTCATGAATTCAGACTTTAGATCTGCCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGCAAATCCATTCTTCATGAATTCAGACTTTAGATCTGCCCTAA  350

seq1  AACAATTGAATACCACACATGAGAATTATGGATATGTAGGTCCATAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTGAATACCACACATGAGAATTATGGATATGTAGGTCCATAATGT  400

seq1  GAAGGCTGTAATTGAATGAGCTTGTGGACACATTTGTAGAGGGGATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGTAATTGAATGAGCTTGTGGACACATTTGTAGAGGGGATGGAG  450

seq1  AGATGCTAAGGTCTGAGGATACAATAGCAGTCAATCTAGAAGGAAGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTAAGGTCTGAGGATACAATAGCAGTCAATCTAGAAGGAAGCAGA  500

seq1  GCCATCTGTCCAGCATAAAAACACACTGTGCCCCACAGTCTAGGATGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTGTCCAGCATAAAAACACACTGTGCCCCACAGTCTAGGATGAGA  550

seq1  AACTAAAACTTATTTTATGTTGTAATAATACCTGAGAAATACTGAAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAACTTATTTTATGTTGTAATAATACCTGAGAAATACTGAAATGC  600

seq1  AGTTGAGTAAGAAAAGGAGTTAGGTTATTGACAGGGGTAGGGATATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTAAGAAAAGGAGTTAGGTTATTGACAGGGGTAGGGATATAAGT  650

seq1  AAGATTCATGTATTGAAGTTCACTATAGGACTAAGGCAAAACTCTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCATGTATTGAAGTTCACTATAGGACTAAGGCAAAACTCTGAATT  700

seq1  CACTGGACGTTTTATAGAGGAAAATGTCTTTAAAGTATTCAATGGTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGACGTTTTATAGAGGAAAATGTCTTTAAAGTATTCAATGGTGATC  750

seq1  TGAACAAGAAAATGTTGGCTCTAGGTTGGCTTTAAACTCACAGAAATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAGAAAATGTTGGCTCTAGGTTGGCTTTAAACTCACAGAAATCCT  800

seq1  GCTGCCTCAGCGTTCCAACAGCTAATATTACAAAGTGTGCTACCACCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTCAGCGTTCCAACAGCTAATATTACAAAGTGTGCTACCACCCCT  850

seq1  TGTCAATTCTGATTTTTCAGCATGATTTTGTGTTCAGTATTCAGGGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTCTGATTTTTCAGCATGATTTTGTGTTCAGTATTCAGGGAATA  900

seq1  AATCAAC-TTTTTATACCCTTAACCAAACTATAGAGGAAAGCATGTGCCT  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTTTTTTATACCCTTAACCAAACTATAGAGGAAAGCATGTGCCT  950

seq1  A-GGTCTGCAAC-TCCACCAGGTCTGAGACTATCCACCAGGTCTGCGACT  997
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGCAACTTCCACCAGGTCTGAGACTATCCACCAGGTCTGCGACT  1000

seq1  GTCCACCAGGTCTGTGCCTGTCTGCCAGGTCGGCGCCTG-TCCACAAGGA  1046
      || |||   ||||||||  |||||||||||||||||||| ||||||||  
seq2  GT-CAC--AGTCTGTGCTGGTCTGCCAGGTCGGCGCCTGTTCCACAAGAT  1047

seq1  CCTTGAGTTGCCTAACAGAGACTGTTAGAAATGATTTTGTTGCCTTG-AG  1095
      | ||||||||| ||||| |||||  |||||||||||| ||||||||| ||
seq2  CTTTGAGTTGCTTAACAAAGACTTGTAGAAATGATTTGGTTGCCTTGAAG  1097

seq1  GTACTTTTGTCACAGTTCCCAGTAATTGAAATTTCCTATGGCTGTTAAGA  1145
      |||||||||| |||||||||||| || |||||||||||||||  || |||
seq2  GTACTTTTGTTACAGTTCCCAGT-ATGGAAATTTCCTATGGC--TTTAGA  1144

seq1  ATC  1148
      |||
seq2  ATC  1147


seq1: chr2_9100977_9101037
seq2: B6Ng01-005G02.g_75_135 (reverse)

seq1  TCCAACCCCCCCCCCTCAAAAAAAAAGAGAGTGAGAGCAGAGGGAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCCCCCCCCCTCAAAAAAAAAGAGAGTGAGAGCAGAGGGAGAAGA  50

seq1  ATAAACAGAAA  61
      ||||| |||||
seq2  ATAAAAAGAAA  61


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