BAC Information

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BAC

Clone NameB6Ng01-005O19
Chromosome2 (Build37)
Map Location 97,475,712 - 97,649,578
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043267, Lrrc4c
Downstream geneLOC621146, LOC664974, LOC100042886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005O19.bB6Ng01-005O19.g
ACCDH842927DH842928
length1,184969
definitionDH842927|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O19, 5' end.DH842928|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,475,712 - 97,476,883)(97,648,617 - 97,649,578)
sequence
gaattcagcattttacccttgcaaataccaccaattctagctttatttga
ttgccagaagtagtatgcttattttatttgtatttggtaggctactttcc
cttttttaaaagagtgtagtctccgtggagaagctgaaacccaatctgat
ttatgatttctgacacggaaaactttctagcatatcctcttaattcaacc
atggttttgatatcacgatggaaacctatctgaccattacttccttatct
gtggataaaacaagacaagacaagacaaaacaaacaagacaagacaataa
aaaaacagacaaacaaacaaaaagattatggcgaaaatcagttaatctcc
ttatttatccagaccacccattaaaaaacagtaacaaatcatgaagtcta
gtaacaaattttcaagtacatctgctggctttgtaccttgtatagttctc
tatgagaaatatagatgaagataaaaagggaaaggacagaaatatagatg
aaataaaagcataaatggtactaaggttccactcactgtattaaagtata
aacaaagtgttattatatactttgtgaaatatactctttgaccttagctc
tatgaaatttttaaacaaataattttttaatacttgggatatatgaggta
acttttggtaatgcaataattataaaaattgtatcttaatgaaagttgta
caattccttctaggcaatattgttatttctagttttaaaaattaagtgtt
acaacaggagagagggaagggtaatacaagtttgcaattcataagccctc
aaggaggttactcaagtttaaaaggtttttgtgagtgattggactcttgg
aaaatgaacttcacttaatttgaatgtaagcacatcagttactctgcact
tgcattctgaaacacttccccagccttgcgaacaaagcactctgaacaaa
taaacggcaacttttgtataccccagggcagtttggttttaggttatagc
cttaccaattgggggggagtgcatttttatccaccagtgttgatttcttc
agcaaggttttctcaatttggaagaataagtatcctaatccagaactctg
tcacttgtttgccacattttattatgggagctgcgatcaatggctaagaa
tttatatatgtggagtacttatgtggagctagtg
gagggagaccccttaggaagatcctcagtctcaactaacctggactcttg
ggagctcccaaagtttgagacaccaaccaggcagtatacatgggctggcc
caaactcctggcacatatatagcagaagactacctatattggctaagtgg
aagaagatgtgagacatgaggaccaaggaaaggggatgcctgagggcagc
accttcttggaatcaagggggagggagaatgggatgaaaaactgtgggag
gagagcaagggctgggatgtaaataaataaagctattaattaagaagaga
aaaaataaaagaaaattgcatggcatccaaggccatgagatgagtagaaa
ggctttatcatatactttctgaaaaaagggagctggaaaactggaaaatt
tatagcacctaacttatcaagttttcacaaaacttaaatgtgtcaacatt
tagaaatactgaaagcttagatttcctaaatccagatattgttctaaata
taacaagagagaatgagattatgggaaagctatgtgcagaatattgtgga
agcctagaagataaagggaaaacatctcccttttcatatactgcatatat
tcaggtgttaggtgaaatgtacaccaggttagaaggaagctaggaagaca
agcagctggcaggtatagaaaaagtattttaggatctagtaaaagccatg
tgaaaatgtacaccatatgtgtgaatttttaggacctactggtgaagcac
gcagtgaagcctggagagagaagaatgctttttcagaagtgtgccttcca
atgtgtgtcaggtgattcattctctctatgccctagggttttaatgtgtg
gaaaagtattagactatttgtggaataagcacattaaacttcatcattta
ggaagttggtatcaaggacatttgactagtatctaatatctcatacagtg
tgaaataatttttagctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97475712_97476883
seq2: B6Ng01-005O19.b_47_1230

seq1  GAATTCAGCATTTTACCCTTGCAAATACCACCAATTCTAGCTTTATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTTACCCTTGCAAATACCACCAATTCTAGCTTTATTTGA  50

seq1  TTGCCAGAAGTAGTATGCTTATTTTATTTGTATTTGGTAGGCTACTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGAAGTAGTATGCTTATTTTATTTGTATTTGGTAGGCTACTTTCC  100

seq1  CTTTTTTAAAAGAGTGTAGTCTCCGTGGAGAAGCTGAAACCCAATCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAAAGAGTGTAGTCTCCGTGGAGAAGCTGAAACCCAATCTGAT  150

seq1  TTATGATTTCTGACACGGAAAACTTTCTAGCATATCCTCTTAATTCAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTTCTGACACGGAAAACTTTCTAGCATATCCTCTTAATTCAACC  200

seq1  ATGGTTTTGATATCACGATGGAAACCTATCTGACCATTACTTCCTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTGATATCACGATGGAAACCTATCTGACCATTACTTCCTTATCT  250

seq1  GTGGATAAAACAAGACAAGACAAGACAAAACAAACAAGACAAGACAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAAAACAAGACAAGACAAGACAAAACAAACAAGACAAGACAATAA  300

seq1  AAAAACAGACAAACAAACAAAAAGATTATGGCGAAAATCAGTTAATCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGACAAACAAACAAAAAGATTATGGCGAAAATCAGTTAATCTCC  350

seq1  TTATTTATCCAGACCACCCATTAAAAAACAGTAACAAATCATGAAGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATCCAGACCACCCATTAAAAAACAGTAACAAATCATGAAGTCTA  400

seq1  GTAACAAATTTTCAAGTACATCTGCTGGCTTTGTACCTTGTATAGTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAATTTTCAAGTACATCTGCTGGCTTTGTACCTTGTATAGTTCTC  450

seq1  TATGAGAAATATAGATGAAGATAAAAAGGGAAAGGACAGAAATATAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAAATATAGATGAAGATAAAAAGGGAAAGGACAGAAATATAGATG  500

seq1  AAATAAAAGCATAAATGGTACTAAGGTTCCACTCACTGTATTAAAGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGCATAAATGGTACTAAGGTTCCACTCACTGTATTAAAGTATA  550

seq1  AACAAAGTGTTATTATATACTTTGTGAAATATACTCTTTGACCTTAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTGTTATTATATACTTTGTGAAATATACTCTTTGACCTTAGCTC  600

seq1  TATGAAATTTTTAAACAAATAA-TTTTTAATACTTGGGATATATGAGGTA  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATGAAATTTTTAAACAAATAATTTTTTAATACTTGGGATATATGAGGTA  650

seq1  ACTTTTGGTAATGCAATAATTATAAAAATTGTATCTTAATGAAAGTTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGTAATGCAATAATTATAAAAATTGTATCTTAATGAAAGTTGTA  700

seq1  CAATTCCTTCTAGGCAATATTGTTATTTCTAGTTTTAAAAATTAAGTGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCTTCTAGGCAATATTGTTATTTCTAGTTTTAAAAATTAAGTGTT  750

seq1  ACAACAGGAGAGAGGGAAGGGTAATACAAGTTTGCAATTCATAAGCCCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGGAGAGAGGGAAGGGTAATACAAGTTTGCAATTCATAAGCCCTC  800

seq1  AAGGAGGTAACTCAAGTTTAAAAGGTTTTTGTGAGTGATTGGACTCTTGG  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTTACTCAAGTTTAAAAGGTTTTTGTGAGTGATTGGACTCTTGG  850

seq1  AAAATGAACTTCACTTAATTTGAATGTAAGCACATCAGGTTACTCTGCAC  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAATGAACTTCACTTAATTTGAATGTAAGCACATCA-GTTACTCTGCAC  899

seq1  TTGCA-TCTGAAACAC-TCCCCAGCCTTGCGAACAAAGCACTCTGAACAA  947
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGCATTCTGAAACACTTCCCCAGCCTTGCGAACAAAGCACTCTGAACAA  949

seq1  ATAAACGGCAAC-TTTGTATACCCCAGGGCAGTTTGGTTTTTAGGTTATA  996
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  ATAAACGGCAACTTTTGTATACCCCAGGGCAGTTTGG-TTTTAGGTTATA  998

seq1  GCCTTACCAAT---GGGGGAGTGCA-TTTTATCCA-CAGTGTTGATTTC-  1040
      |||||||||||   ||||||||||| ||||||||| ||||||||||||| 
seq2  GCCTTACCAATTGGGGGGGAGTGCATTTTTATCCACCAGTGTTGATTTCT  1048

seq1  TCAGCAAGG-TTTCTCAATTTGGAAGAAT-AGTATCC-AAT-CAGAAC-C  1085
      ||||||||| ||||||||||||||||||| ||||||| ||| |||||| |
seq2  TCAGCAAGGTTTTCTCAATTTGGAAGAATAAGTATCCTAATCCAGAACTC  1098

seq1  TGTCAC-TGTTGCCCAACATTTAATTATGGAGTCTGCAGTTCAATGCTAA  1134
      |||||| ||||  || |||||| |||||||   |||| | ||||||   |
seq2  TGTCACTTGTTTGCC-ACATTTTATTATGGGAGCTGC-GATCAATGGCTA  1146

seq1  AGAATTTATATATGT-GAGTAAATTATGTGGAGGTAGTG  1172
      ||||||||||||||| |||| | |||||||||| |||||
seq2  AGAATTTATATATGTGGAGT-ACTTATGTGGAGCTAGTG  1184

seq1: chr2_97648617_97649578
seq2: B6Ng01-005O19.g_78_1046 (reverse)

seq1  GTAGCTAAAAAATAATTTCACAACTGTATGAGATATTAGATACCTAGTCA  50
      |||||| |||||| ||||||| |||||||||||||||||||| |||||||
seq2  GTAGCT-AAAAATTATTTCAC-ACTGTATGAGATATTAGATA-CTAGTCA  47

seq1  AATGTCC-TGATACCAACTTCCTAAATGATG-AGTTT-ATGTGCTTATTC  97
      ||||||| ||||||||||||||||||||||| ||||| ||||||||||||
seq2  AATGTCCTTGATACCAACTTCCTAAATGATGAAGTTTAATGTGCTTATTC  97

seq1  CACAAATAGTCT-ATAC-TTTCCACACATTAAAA-CCTA-GGCATAGAGA  143
      |||||||||||| |||| |||||||||||||||| |||| ||||||||||
seq2  CACAAATAGTCTAATACTTTTCCACACATTAAAACCCTAGGGCATAGAGA  147

seq1  GAATGAATCACCTGACACACATTGGAAGGCACACTTCTG-AAAAGCATTC  192
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAATGAATCACCTGACACACATTGGAAGGCACACTTCTGAAAAAGCATTC  197

seq1  TTCTCTCTCCAGGCTTCACTGCGTGCTTCACCAGTAGGTCCT-AAAATTC  241
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTCTCTCCAGGCTTCACTGCGTGCTTCACCAGTAGGTCCTAAAAATTC  247

seq1  ACACATATGGTGTACATTTTCACATGGCTTTTACTAGATCCTAAAATACT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGGTGTACATTTTCACATGGCTTTTACTAGATCCTAAAATACT  297

seq1  TTTTCTATACCTGCCAGCTGCTTGTCTTCCTAGCTTCCTTCTAACCTGGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATACCTGCCAGCTGCTTGTCTTCCTAGCTTCCTTCTAACCTGGT  347

seq1  GTACATTTCACCTAACACCTGAATATATGCAGTATATG-AAAGGGAGATG  390
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTACATTTCACCTAACACCTGAATATATGCAGTATATGAAAAGGGAGATG  397

seq1  TTTTCCCTTTATCTTCTAGGCTTCCACAATATTCTGCACATAGCTTTCCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTTATCTTCTAGGCTTCCACAATATTCTGCACATAGCTTTCCC  447

seq1  ATAATCTCATTCTCTCTTGTTATATTTAGAACAATATCTGGATTTAGGAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTCATTCTCTCTTGTTATATTTAGAACAATATCTGGATTTAGGAA  497

seq1  ATCTAAGCTTTCAGTATTTCTAAATGTTGACACATTTAAGTTTTGTGAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGCTTTCAGTATTTCTAAATGTTGACACATTTAAGTTTTGTGAAA  547

seq1  ACTTGATAAGTTAGGTGCTATAAATTTTCCAGTTTTCCAGCTCCCTTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATAAGTTAGGTGCTATAAATTTTCCAGTTTTCCAGCTCCCTTTTT  597

seq1  TCAGAAAGTATATGATAAAGCCTTTCTACTCATCTCATGGCCTTGGATGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGTATATGATAAAGCCTTTCTACTCATCTCATGGCCTTGGATGC  647

seq1  CATGCAATTTTCTTTTATTTTTTCTCTTCTTAATTAATAGCTTTATTTAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATTTTCTTTTATTTTTTCTCTTCTTAATTAATAGCTTTATTTAT  697

seq1  TTACATCCCAGCCCTTGCTCTCCTCCCACAGTTTTTCATCCCATTCTCCC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCCCAGCCCTTGCTCTCCTCCCACAGTTTTTCATCCCATTCTCCC  747

seq1  TCCCCCTTGATTCCAAGAAGGTGCTGCCCTCAGGCATCCCCTTTCCTTGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTTGATTCCAAGAAGGTGCTGCCCTCAGGCATCCCCTTTCCTTGG  797

seq1  TCCTCATGTCTCACATCTTCTTCCACTTAGCCAATATAGGTAGTCTTCTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGTCTCACATCTTCTTCCACTTAGCCAATATAGGTAGTCTTCTG  847

seq1  CTATATATGTGCCAGGAGTTTGGGCCAGCCCATGTATACTGCCTGGTTGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATGTGCCAGGAGTTTGGGCCAGCCCATGTATACTGCCTGGTTGG  897

seq1  TGTCTCAAACTTTGGGAGCTCCCAAGAGTCCAGGTTAGTTGAGACTGAGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAACTTTGGGAGCTCCCAAGAGTCCAGGTTAGTTGAGACTGAGG  947

seq1  ATCTTCCTAAGGGGTCTCCCTC  962
      ||||||||||||||||||||||
seq2  ATCTTCCTAAGGGGTCTCCCTC  969