MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-005P24
Chromosome	2 (Build37)
Map Location	32,633,971 - 32,634,128
singlet/doublet	singlet
Overlap gene	1700019L03Rik
Upstream gene	Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1
Downstream gene	Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik
Link	Open Mouse BAC browser

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BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-005P24.b
ACC	DH842979
length	982
definition	DH842979\|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P24, 5' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctgtgcttaaaccatttgacccttgccaggcatggtggagaacac ctttaatcccagcactcgggaggcagaggcaggcagatttctgagttcaa ggacagcctggtctacagagtgagttccaggacagccagggctatacaga gaaaccctgcttaaaaaaaaaaaaaaaacaaaaaacaaaaaaaaacacaa atttaaggaactttagaaatgaaaaatttaggtaagcagacaagaattac tgaggtaagttggcaaactgcataagcagaagaaatggaagagagaatct caggagttgaaaatataagagtagatacattggccataacaaatgttaaa acaaaaaatttcctcatacaaaacatccaggaaatcttggaaaatatgaa aatactaaacctcggaataataggaatagagcatggagaagagcccagct caaagataaagaaattatttttttatcaaaatcagaagcaaatggaccaa agagcaaagcgaactaagaaacaagctggtagccattataatatctagca aaatagacttcaaaccaaaataatcaaaagagacagggaaggacacttca tactcatgaaagaaaaactccaccaagattatatttcaattcttgccaac tctacacaaggacagccacatttgtaaaagaaacattactgaaactaaaa ttatacaataatcctcacacatcgaaaatcggttatttcaatatctcact ctcaccaatgaaaaagtcatccagacaaaaataaaacagataaatattag aaataatagacattataaaccaaatgaacataacagatatctacagaaca ttttacccaacccccaaaaagaatattcccttcttctcagcacctcataa aactttctccaaagtgactacatactgagttccaaagcaagcctcaacag atccaaaaagaaagaaagaaagaaaggaaaag
quality values	Open. Hide. 61 47 35 43 61 61 47 47 61 61 61 61 47 52 61 61 61 49 38 61 61 61 61 61 61 61 34 30 21 28 20 15 11 22 27 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 32 37 30 28 28 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 55 44 44 55 61 61 61 61 61 61 61 61 61 59 59 59 59 59 52 59 59 59 59 59 59 59 59 61 61 61 59 59 59 52 59 49 43 49 52 52 59 59 61 61 55 59 61 59 59 59 61 59 59 59 36 59 55 59 59 61 61 59 59 59 59 61 61 61 59 59 61 59 59 61 59 59 49 39 59 59 45 52 41 59 50 59 59 59 59 59 61 59 59 61 59 59 59 59 59 59 59 61 59 59 59 59 59 61 61 59 52 59 59 59 59 59 41 39 59 52 43 59 52 52 59 61 59 52 49 37 59 36 59 41 52 59 59 59 52 59 45 45 61 59 52 59 59 59 61 61 59 61 61 59 61 52 59 43 61 52 59 52 43 59 59 52 59 49 55 55 61 52 55 55 52 55 52 52 61 52 43 52 52 55 55 61 61 61 61 61 61 55 55 55 43 44 55 55 61 55 55 55 55 55 52 55 52 55 52 55 61 61 55 55 61 61 55 50 55 50 55 50 50 50 50 50 50 61 55 61 55 55 61 61 55 61 55 61 55 55 55 55 50 55 55 50 61 55 61 61 61 55 55 55 61 55 55 55 55 61 55 55 61 61 61 61 55 55 50 50 52 53 61 61 50 61 50 37 50 50 61 53 61 61 50 50 43 50 61 53 52 50 50 50 61 61 53 61 50 50 61 61 61 61 61 53 61 61 61 50 61 61 61 50 61 61 53 61 61 61 61 61 61 47 61 61 61 61 45 50 46 47 61 47 61 61 61 47 61 61 61 61 61 61 61 61 61 53 47 47 47 47 47 53 47 47 47 57 57 47 53 53 50 53 53 47 57 57 53 53 53 57 47 53 57 53 53 53 52 53 53 53 57 57 57 47 57 53 57 57 57 52 52 50 38 53 47 53 53 53 52 53 57 57 47 50 53 47 52 53 50 53 57 52 53 57 57 53 53 53 50 52 43 53 57 52 52 52 53 53 57 38 37 38 47 53 53 50 32 46 43 52 53 53 42 53 53 52 57 53 45 53 43 41 33 43 45 53 50 34 17 52 41 32 52 45 41 31 50 45 41 45 57 57 57 34 30 38 53 53 37 52 53 52 37 41 27 53 52 53 44 53 38 53 33 50 30 39 57 52 38 52 40 44 47 39 19 38 21 38 31 41 53 37 40 57 57 57 36 57 57 37 42 33 57 53 28 52 53 52 33 27 14 37 37 33 57 57 36 37 53 33 35 28 44 28 44 40 30 45 41 47 40 43 41 40 40 31 53 37 53 40 40 53 57 57 28 36 33 48 40 27 40 33 34 57 44 28 27 38 31 29 34 44 48 31 29 30 37 30 48 30 27 46 45 23 30 32 34 30 51 46 46 45 30 31 34 25 29 12 26 14 29 29 29 30 39 47 51 29 41 14 45 39 37 45 29 44 29 33 24 51 33 44 24 46 36 29 29 47 46 23 29 18 24 30 29 41 36 29 24 46 43 32 43 23 51 31 37 39 29 46 29 31 41 46 29 36 12 36 20 22 31 16 20 29 29 19 29 26 29 20 36 18 33 43 38 28 15 23 46 46 36 23 29 41 41 16 28 38 36 36 32 23 18 41 41 39 13 19 29 16 7 6 8 33 11 38 9 10 30 23 17 23 25 28 29 23 33 28 17 29 23 29 21 16 28 29 51 44 22 25 28 51 24 24 16 24 34 28 51 26 24 19 28 27 33 28 20 24 8 23 20 31 22 22 22 26 28 17 22 28 27 51 29 27 26 18 22 26 24 21 28 23 28 17 16 8 10 23 26 14 29 14 36 42 34 28 13 23 39 14 15 29 33 9 26 24 35 12 16 35 44 24 7 8 35 44 44 23 30

Alignment Information

BAC End 1	BAC End 2
seq1: chr2_32633971_32634128 seq2: B6Ng01-005P24.b_96_241 (reverse) seq1 TTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTGTTTGTTTTTAGAGACA 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\| \| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\| \|\| \|\| seq2 TTTTTTTTTGTTTTTTGTTTTTTTTTTTT---------TTTTAAG---CA 38 seq1 GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG 88 seq1 GCCAGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCCAGTGCTGGG 150 \|\| \|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\| seq2 GCTGTCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGG 138 seq1 ATTAAAGG 158 \|\|\|\|\|\|\|\| seq2 ATTAAAGG 146

BAC End 1

BAC End 2

seq1: chr2_32633971_32634128
seq2: B6Ng01-005P24.b_96_241 (reverse)

seq1  TTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTGTTTGTTTTTAGAGACA  50
      |||||||||||||| | ||||||||||||         |||| ||   ||
seq2  TTTTTTTTTGTTTTTTGTTTTTTTTTTTT---------TTTTAAG---CA  38

seq1  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG  88

seq1  GCCAGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCCAGTGCTGGG  150
      ||   ||| |||||||||||||  |||||||||||||||| |||||||||
seq2  GCTGTCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGG  138

seq1  ATTAAAGG  158
      ||||||||
seq2  ATTAAAGG  146

BAC Information

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BAC End Information

Alignment Information