BAC Information

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BAC

Clone NameB6Ng01-006B12
Chromosome12 (Build37)2 (Build37)
Map Location 10,765,329 - 10,765,370136,474,303 - 136,475,426
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC382567, Nt5c1b, Rdh14, LOC238074
Downstream geneLOC100042308, EG668435, Kcns3, LOC628276, Msgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006B12.bB6Ng01-006B12.g
ACCDH843049DH843050
length3401,110
definitionDH843049|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B12, 5' end.DH843050|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(10,765,329 - 10,765,370)(136,474,303 - 136,475,426)
sequence
tattgatggattttcatatgtttaaccgtacatacctccctgagataaag
ccaacttgattgtggtagatgatttttaaaatatttttggattcattttg
caagtattttgttgagtacttttgcatctatatttatagagaaactggtt
tgaaattctctttctttgttgaatctctgtgtggtttaggtattagggtg
gctgaagcctcataaaatgaatttggtaatgttctttctgtttctgtttt
gtggaatattgatgttagcgcttgtttgaaagtctggcagaatactctgg
ccctaggattttgttgttgttgttggtggtggtggtggtg
gaattcacaggacacaggcacagacatgttcatagacacggaccatttcc
caacgttgaaggagaagacactgatgaagtatagggtgaagtatatggaa
gcagactgaacatctgggaggaacaaggaggctcagggttggccagcaac
tttagtccacttttttgacttggagagttggtgactcacattcagctggg
acaactcatggcacatattggttttacagttctgcaacttcatgaacatt
tcataagctctctcagtggccttgatattgctccctttttaccaccagat
ccatccttctgaattagaaatcagccagaaattggttctggaaggcccca
gctagctgtccctttgatgtctgatcctggggtggatgaggtatatggct
ggatgctttcttagaagcttcctatgatgctttatcgtcaggctgttcca
cctccaggtgttatttctaaccccattcagctagactttaaagagaagct
gtacagttggtagggtttactaacctgagacctgagttccactgattaat
agacatctaggctaggagactgcatgtgggctcaaaatcaaggggaaaca
tttggatctccaggacaagtaggacagtctaaaacctggagctgagtctg
aaaggagcagagagcaacaatgaagccacggtgtcctcagaccgtgcagg
gacaaaatgagttgtacctgtctcgagttactgcactggttttccagcca
gctctgcagcctgactgctttttactgcagagcctgtgccctccaggtgc
aggtggccattgatgccccacaggccccagtaaggtgtgccaggaagcct
tctttttttctgcagtgaggacttgggccagctctgggctggctgccaac
agctgcttgcagactgagtcaccagcacagacctctcggctgcagtcaag
gaaggacagacagcaaactgtgatggcaatgtctctttgcttttacttgc
ctcttcatagctctctgatctttccgcgatgtaggctctggttcatttgg
tgaaattcccaatcctttagagtatttaccttcggaagtattttgtcctg
tggctccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_10765329_10765370
seq2: B6Ng01-006B12.b_357_392 (reverse)

seq1  CACCACCACCACCACCAACAACAACAACAACAACAAAATCCT  42
      |||||||||||||||      |||||||||||||||||||||
seq2  CACCACCACCACCAC------CAACAACAACAACAAAATCCT  36

seq1: chr2_136474303_136475426
seq2: B6Ng01-006B12.g_68_1177 (reverse)

seq1  CAAGGAGCCACCAAGGACATAAATACTTCCGAAAGGTAAATACTCTAAAG  50
      |||||||||||  |||||| ||||||||||| ||||||||||||||||| 
seq2  CAAGGAGCCAC--AGGACA-AAATACTTCCG-AAGGTAAATACTCTAAA-  45

seq1  GGATTGGGAATCTACACAAATGGAACCAGGAGCCCTACATCGCGTGAAAG  100
      ||||||||||| | ||| ||  |||||| ||| ||||||||||| |||||
seq2  GGATTGGGAAT-TTCACCAAATGAACCA-GAG-CCTACATCGCG-GAAAG  91

seq1  ATCAGAGGAGCTATGGAAAGAGGGCAAGTAAAAGCAAAGAGACATTGCCC  150
      |||||| ||||||||  |||| ||||||||||||||||||||||||| ||
seq2  ATCAGA-GAGCTATG--AAGA-GGCAAGTAAAAGCAAAGAGACATTG-CC  136

seq1  ATCACAGTTTGCTGTCTGTTCCTTCCTTGACTGCAGCCGAGAGGTCTGTG  200
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCACAGTTTGCTGTCTG-TCCTTCCTTGACTGCAGCCGAGAGGTCTGTG  185

seq1  CT-GTGACTCAGTCTGCAAGCAGCTGTTGGCAGCCAGCCCAGAGCTGGCC  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACTCAGTCTGCAAGCAGCTGTTGGCAGCCAGCCCAGAGCTGGCC  235

seq1  CAGGTCCTCACTGCAG-AGAAAAGAAGGCTTCCTGGCACACCTTTACTGG  298
      || ||||||||||||| | ||||||||||||||||||||||| |||||||
seq2  CAAGTCCTCACTGCAGAAAAAAAGAAGGCTTCCTGGCACACC-TTACTGG  284

seq1  GGCCTGTGGGGCATCAATGGCCACCTGCACCTGGAGGGCACAGGCTCTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGGGGCATCAATGGCCACCTGCACCTGGAGGGCACAGGCTCTGC  334

seq1  AGTAAAAAGCAGTCAGGCTGCAGAGCTGGCTGGAAAACCAGTGCAGTAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAAGCAGTCAGGCTGCAGAGCTGGCTGGAAAACCAGTGCAGTAAC  384

seq1  TCGAGACAGGTACAACTCATTTTGTCCCTGCACGGTCTGAGGACACCGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGACAGGTACAACTCATTTTGTCCCTGCACGGTCTGAGGACACCGTG  434

seq1  GCTTCATTGTTGCTCTCTGCTCCTTTCAGACTCAGCTCCAGGTTTTAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTGTTGCTCTCTGCTCCTTTCAGACTCAGCTCCAGGTTTTAGAC  484

seq1  TGTCCTACTTGTCCTGGAGATCCAAATGTTTCCCCTTGATTTTGAGCCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTACTTGTCCTGGAGATCCAAATGTTTCCCCTTGATTTTGAGCCCA  534

seq1  CATGCAGTCTCCTAGCCTAGATGTCTATTAATCAGTGGAACTCAGGTCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTCTCCTAGCCTAGATGTCTATTAATCAGTGGAACTCAGGTCTC  584

seq1  AGGTTAGTAAACCCTACCAACTGTACAGCTTCTCTTTAAAGTCTAGCTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGTAAACCCTACCAACTGTACAGCTTCTCTTTAAAGTCTAGCTGA  634

seq1  ATGGGGTTAGAAATAACACCTGGAGGTGGAACAGCCTGACGATAAAGCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTAGAAATAACACCTGGAGGTGGAACAGCCTGACGATAAAGCAT  684

seq1  CATAGGAAGCTTCTAAGAAAGCATCCAGCCATATACCTCATCCACCCCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAGCTTCTAAGAAAGCATCCAGCCATATACCTCATCCACCCCAG  734

seq1  GATCAGACATCAAAGGGACAGCTAGCTGGGGCCTTCCAGAACCAATTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACATCAAAGGGACAGCTAGCTGGGGCCTTCCAGAACCAATTTCT  784

seq1  GGCTGATTTCTAATTCAGAAGGATGGATCTGGTGGTAAAAAGGGAGCAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTTCTAATTCAGAAGGATGGATCTGGTGGTAAAAAGGGAGCAAT  834

seq1  ATCAAGGCCACTGAGAGAGCTTATGAAATGTTCATGAAGTTGCAGAACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCCACTGAGAGAGCTTATGAAATGTTCATGAAGTTGCAGAACTG  884

seq1  TAAAACCAATATGTGCCATGAGTTGTCCCAGCTGAATGTGAGTCACCAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAATATGTGCCATGAGTTGTCCCAGCTGAATGTGAGTCACCAAC  934

seq1  TCTCCAAGTCAAAAAAGTGGACTAAAGTTGCTGGCCAACCCTGAGCCTCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGTCAAAAAAGTGGACTAAAGTTGCTGGCCAACCCTGAGCCTCC  984

seq1  TTGTTCCTCCCAGATGTTCAGTCTGCTTCCATATACTTCACCCTATACTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCCCAGATGTTCAGTCTGCTTCCATATACTTCACCCTATACTT  1034

seq1  CATCAGTGTCTTCTCCTTCAACGTTGGGAAATGGTCCGTGTCTATGAACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGTCTTCTCCTTCAACGTTGGGAAATGGTCCGTGTCTATGAACA  1084

seq1  TGTCTGTGCCTGTGTCCTGTGAATTC  1124
      ||||||||||||||||||||||||||
seq2  TGTCTGTGCCTGTGTCCTGTGAATTC  1110