BAC Information

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BAC

Clone NameB6Ng01-006I14
Chromosome2 (Build37)
Map Location 123,050,803 - 123,051,476
singlet/doubletsinglet
Overlap genenone
Upstream geneSord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
Downstream gene4930517E11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006I14.bB6Ng01-006I14.g
ACCDH843368DH843369
length9871,150
definitionDH843368|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I14, 5' end.DH843369|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaaa
cgcgttctcacgcccggccaggaaagacgcaacaaaccagaatcttctgc
ggcaaagctttattgcttacatcttcaggagccagagtgcaagaagcaag
agagagagaaaacgaaaccccgtcccttttttaggagagttatatttcgc
ctaggacgtgtcactccctgattggctgcagcccatcggccgagttgacg
tcacggggaaggcagagcacatggagtggagaaccaccctcggcatatgc
gcagattatttgtttaccacttagaacacagctgtcagcgccatcttgta
acggcgaatgtgggcgcggctcccaacacatttacacaatggagtactac
tcagctattaaaaacaatgaatttatgaaattcttaggcaaatggataga
tgcagaggatatcatcctaaatgaggtaacaaaagaacacacatgatatg
cactcactgataagtggaacagtccatgtatttcaggggaggagaggcat
caggaacgggaggtagctggccacaacacatccagtaaagtagcaaaaag
aggtgagcactttggttcatcttgctttcagtctagaaccacagtgcaca
catgtggaggaggccttccttcctctcttacacctcgttggaagctcctg
cacagccgcgcccagaggtgtatctcctaggtgactccaaatccagttaa
gccagcaatgtatgccttaaagtttctctattggtttgctttttaaacat
ttattctttggcaatttcatacatgtgtataattctggtccccctgtaaa
cccagatctctcttccccaccccagcttcttttaaga
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggaccccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaatacctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtatatcgagatataaggtacaatatgcaaaacatatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctcattcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggtccatctagagactgccatatccagggatccatcccataatta
gcctccaaacgatgacaccattgcatacactagcaagcctttgttgcaag
gacgtgatatagctgtctcttgtgagactaggccgaggcctagcaaacac
agaagtggatgctcacagtcaactattgatggagcacaggcccccaatga
gagctagagaagtatccaagagctaagagatctgcaccctatcgtgacac
attatgactacagtacccagagctctgactctagctgcatatgtatcaaa
gatgactagtcggcatcactggaaagaaaggcccaatggtaggccactta
tatgtccagtacagggcatgcagcaaattgcatgggtgttaggggagacg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123050803_123051476
seq2: B6Ng01-006I14.b_46_524 (reverse)

seq1  GTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCGCTGACATCC  50
      |||||||||||||| |||||||||||||| |||||||||||||||||  |
seq2  GTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACA-GC  49

seq1  TGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGTATTTT  100
      |||||||||||||||||||||||||||||||||| |||| |||||  || 
seq2  TGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGGTTC  99

seq1  ACGACTACTTGTACTCTGCCTTTCCCGTGAACGTCAGCTCGGCC-ATGGG  149
       | ||| | ||| ||||||||| |||||| |||||| ||||||| |||||
seq2  TCCACTCCATGTGCTCTGCCTTCCCCGTG-ACGTCAACTCGGCCGATGGG  148

seq1  CTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCAAAATATAACTCTCCTA  199
      |||||||||||||||||||||  |||||||||| ||||||||||||||||
seq2  CTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAAATATAACTCTCCTA  198

seq1  AAAAGGGGACGGGGTTTTCCGCCATTCTCTCTCGCTGGCATCTCTCTGGC  249
      |||| ||||||||||||     | || |||||                  
seq2  AAAAAGGGACGGGGTTT-----CGTTTTCTCT------------------  225

seq1  TCTGCGCGCCCTGCGCTCTCTCGCTGCCTAAAGATGTAAACAATAGAGCG  299
                     |||||| ||| |                       
seq2  ---------------CTCTCTTGCTTC-----------------------  237

seq1  CGCTCTGCGCTTTGGTGGCGCCGGAGCTCTGGCTCCTAAAGATGTAAGAT  349
                                                        
seq2  --------------------------------------------------  237

seq1  AGAAGGGGCTTTCGCTTTTGGGGCTGGGGGTTTGCGCTCCTAGCTCCTGA  399
                                     |||| || || ||||||||
seq2  -------------------------------TTGCACT-CTGGCTCCTGA  255

seq1  AGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTCTGTTGTGTTC  449
      ||||||||||||||||| ||||||||||||||||||||| ||||| ||  
seq2  AGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCT  305

seq1  TTCCTGGCCGGGCGTGCGAACGC---TAATAAGAATTGGTGCCGAATTCC  496
      |||||||||||||||| ||||||   |||||| |||||||||||||||||
seq2  TTCCTGGCCGGGCGTGAGAACGCGTTTAATAACAATTGGTGCCGAATTCC  355

seq1  GGGACGAGAGAAATCCGGGACGAGAAAAAATCCGGGAAGAAAAAACCCGG  546
      ||||||||| |                                       
seq2  GGGACGAGAAA---------------------------------------  366

seq1  GAGGAAACTCGGGACGGGAGTTTCACCGGCGCAAGGAAGATCCCTCATTC  596
          |||||||||           || |||||||||||||||||||||||
seq2  ----AAACTCGGG-----------ACTGGCGCAAGGAAGATCCCTCATTC  401

seq1  CAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGACT  451

seq1  GTTAAGAAGGATTCAACTGCATGAATTC  674
      ||||||||||||||||||||||||||||
seq2  GTTAAGAAGGATTCAACTGCATGAATTC  479