BAC Information

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BAC

Clone NameB6Ng01-007C02
Chromosome2 (Build37)
Map Location 136,416,820 - 136,417,712
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5
Downstream geneSnap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007C02.bB6Ng01-007C02.g
ACCDH843795DH843796
length1,046899
definitionDH843795|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C02, 5' end.DH843796|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatctacctcaagatccttttcagcatatactcaaaggactctac
atcatactacagagagactggaaacagtttatatgtccatcaacaaagat
tcacactattactagtatctgtagagtactctgcatactactagaagaga
aaggtagtcatcaatattacccagctacaaattctgcaacaataaagcag
tcacctgccctccaaaatatactgatgcaataatggcacaaatgctatgt
gtgcaaccaaccactttctgcttggatttaaggtcactttgtgaaagggt
actcatacctgattctgctaaagttcccaagaacctgagagtagacaagt
ctagataagttttaggcctaggaaaaagcctaaaaccatcagtctgccaa
aagaatttagcaataaaataactcctaactgcatgttgttatgcctgctg
atcagaacctcacttagcgaatttcaaagacacttcttctttcagtagat
gggaccaatcactgggaaatgtgcagagagtgagagactttagaatattc
agctctaaatggagtgttcgtcaaacccctcccccaaagtctcagggatt
tgtgtgaaagaagaggcagaaagagtgcaagagccagaggagatggataa
cttcatagaaacagtgccttccagacacaacaggagtgatgcaaatgcaa
attcactgtggcagggaccgtggcaacacacacataaacatgcccaagtt
caaactagatagagggggaagtggacctggaattccacccttaattaaga
agctattgcaatttgatacttgctttgcaaagggaaattttgttttctct
agtggagtcttcactgggttttatcagccacattttcaggacttatccca
tggctggccaggagtagtttgctaacattaaaaggacctctagtggtatt
ttgtgactattataataattctgctttcctcaggcatttttgcctcttgg
gtttttgttgtttcatttcatttggggggaattatttgggaagagt
gaattctgggaaagagccatgcataggagattcacctaggaatgataaaa
gtcagactcatgatacctgagcacaggtaagtggctacagggcagaatgt
atattagaataggtgggataatttatgatctcataagagaaagggatagc
tgtatggcgaaggtatttgcaaatatattttgagtctgagtcttgttttt
gggagcatgggggtaggaggaagaatcagacctaacttctacaaacttga
aatttgttaaacacacaaagaccacaaaaccctgtaagtccttcacttgt
tcaccagaaagaaaaggataccaaatactgcaatgatcatgattgtcttg
gtcatggtgtctcttcatatcactgaacccttatctaagatacccagtag
catgtcatttgactgtttggtatgcatggcaaggaaccaacaagcagaga
acccacaactgttcccaaggcttcaactcagcttcagaccaaatgctgac
ataacctgcttaaattgctgtgagtacatccattactccacctgtccatt
catccatttcttctgtctagacctggtgctgcacctatcctctgcaactg
ttatcaactctgagtcctcacttaagcctgagtcccttcaccccacaaca
acctacttctatccttccagcaactgtctaacaggctttcctttaatatt
tttatacatccattgtagtgcctgcttgcatcaataacagctctttacct
ttgccactagtgtgacccctttagctgtttgaaatcttcctacaggcttc
tttagctctttgtctgtataatgtgttctttgatctggagagttaatatt
gctacttaaatttagaatataaaggatcagagtttgcctatggaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136416820_136417712
seq2: B6Ng01-007C02.g_68_965

seq1  GAATTCTGGGAAAGAGCCATGCATAGGAGATTCACCTAGGAATGATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAAGAGCCATGCATAGGAGATTCACCTAGGAATGATAAAA  50

seq1  GTCAGACTCATGATACCTGAGCACAGGTAAGTGGCTACAGGGCAGAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACTCATGATACCTGAGCACAGGTAAGTGGCTACAGGGCAGAATGT  100

seq1  ATATTAGAATAGGTGGGATAATTTATGATCTCATAAGAGAAAGGGATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAATAGGTGGGATAATTTATGATCTCATAAGAGAAAGGGATAGC  150

seq1  TGTATGGCGAAGGTATTTGCAAATATATTTTGAGTCTGAGTCTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGCGAAGGTATTTGCAAATATATTTTGAGTCTGAGTCTTGTTTTT  200

seq1  GGGAGCATGGGGGTAGGAGGAAGAATCAGACCTAACTTCTACAAACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCATGGGGGTAGGAGGAAGAATCAGACCTAACTTCTACAAACTTGA  250

seq1  AATTTGTTAAACACACAAAGACCACAAAACCCTGTAAGTCCTTCACTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTAAACACACAAAGACCACAAAACCCTGTAAGTCCTTCACTTGT  300

seq1  TCACCAGAAAGAAAAGGATACCAAATACTGCAATGATCATGATTGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGAAAGAAAAGGATACCAAATACTGCAATGATCATGATTGTCTTG  350

seq1  GTCATGGTGTCTCTTCATATCACTGAACCCTTATCTAAGATACCCAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTGTCTCTTCATATCACTGAACCCTTATCTAAGATACCCAGTAG  400

seq1  CATGTCATTTGACTGTTTGGTATGCATGGCAAGGAACCAACAAGCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCATTTGACTGTTTGGTATGCATGGCAAGGAACCAACAAGCAGAGA  450

seq1  ACCCACAACTGTTCCCAAGGCTTCAACTCAGCTTCAGACCAAATGCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAACTGTTCCCAAGGCTTCAACTCAGCTTCAGACCAAATGCTGAC  500

seq1  ATAACCTGCTTAAATTGCTGTGAGTACATCCATTACTCCACCTGTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGCTTAAATTGCTGTGAGTACATCCATTACTCCACCTGTCCATT  550

seq1  CATCCATTTCTTCTGTCTAGACCTGGTGCTGCACCTATCCTCTGCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTCTTCTGTCTAGACCTGGTGCTGCACCTATCCTCTGCAACTG  600

seq1  TTATCAACTCTGAGTCCTCACTTAAGCCTGAGTCCCTTCACCCCACAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTCTGAGTCCTCACTTAAGCCTGAGTCCCTTCACCCCACAACA  650

seq1  ACCTACTTCTATCCTTCCAGCAACTGTCTAACAGGCTT--CCTTAATA-T  697
      ||||||||||||||||||||||||||||||||||||||  | |||||| |
seq2  ACCTACTTCTATCCTTCCAGCAACTGTCTAACAGGCTTTCCTTTAATATT  700

seq1  TTTATACATCCATTGTAGTGCCTGCTTGCATCAATAACAGCTCTTTACCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATCCATTGTAGTGCCTGCTTGCATCAATAACAGCTCTTTACCT  750

seq1  TTGCCACTAGTGTGACCCCTTTAGCTGTTTGAAATC-TCCTACA-GCCTC  795
      |||||||||||||||||||||||||||||||||||| ||||||| || ||
seq2  TTGCCACTAGTGTGACCCCTTTAGCTGTTTGAAATCTTCCTACAGGCTTC  800

seq1  TTTAGCTCTTTGTTCTGTATAATGTGTTCTTTGATCT-GAGAGTTAATAT  844
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  TTTAGCTCTTTG-TCTGTATAATGTGTTCTTTGATCTGGAGAGTTAATAT  849

seq1  TGCTAACTAAAATTAGAATATAAA-GATCAGAGTTTGCCTATGGTAAGTT  893
      |||||  |||| |||||||||||| ||||||||||||||||||| |||||
seq2  TGCTACTTAAATTTAGAATATAAAGGATCAGAGTTTGCCTATGG-AAGTT  898