BAC Information

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BAC

Clone NameB6Ng01-007D13
Chromosome2 (Build37)
Map Location 156,767,309 - 156,920,518
singlet/doubletdoublet
Overlap geneNdrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332
Upstream geneGdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880
Downstream geneSamhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007D13.bB6Ng01-007D13.g
ACCDH843859DH843860
length1,1121,022
definitionDH843859|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D13, 5' end.DH843860|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,767,309 - 156,768,443)(156,919,501 - 156,920,518)
sequence
gaattccctctgaggacttggatgaggtggagctgaggatgcagggaagg
aggtgcgggagagccttggccatgggtgacaggttagggaagaaagatgg
cctgaggtcacccatgggctgtcagtgagcctcaggctgcagcgagagag
gagcatgagtaacgacccagctcacttcacgggctgcccgatccataatg
ctcagagacccaccgtgctctatgaatgtcacaggctgctccctgtctaa
gcgtgggggtcaggacatccacatactagacagacatttacataagtcag
gctgggggaggattccacagccactggcaacagcgttgttagtactctcc
atccaaagccaggggaggcaatattccctaaagggaaacccatgtgggga
cagacagacagacagactgttcagaatctggtctgctggtaggcagaaaa
tatgtgcaagatttcatttgcctggaattggataagtagactaggctagc
ctgtccctgccttgagcagtgggatgccaccatggccagccctggatagg
tttttcttgtttttttaagacaggttttcttggctgtcgtggaactcact
ttgtagaccaggatggtctatacagagatcctcctatttctgcttcccag
agtgctgggattaaaggaaaggctaccaagcctggcctggataagcctgt
ccttatgccagttcacctcagactctatcctcctctcacatctggcttaa
ggaacataattctttgggcatacactgttctacccttactatcttttttt
ttttttaaaccctctattattggtacatagactgtgtcaccttttttgtc
ttacaatgggtttcacagatattctggcttggtgagttctagctatatga
ccttaaataacatattgattcacttggtgagtttaagagcagtagctgct
atacagtagcatcggatacgtgttatttcttaaaagatcatataaccctc
tgctagagctacatcactataagttctagaatcaaatactgatttcatgg
ttgatgtcataaatctatgacctgtgaataacatgtccagtccttgaaac
ttctttcatggc
gaattcagtcctccagccagcgtgcacctgcccccatccttgctttcctc
cgtgccctctcctccccttaggtactgcacctgagccacactggccttcc
ttttcaccaacacctgaaggtgctcatgccttagggcctccctacgttca
gacccgtctgtccacagacctccccaacccaggcttttctccccaagggt
catttcttaccctacagcctgagtgccattgcagagagcccctgattgat
ttccctaggcatctactagctctgagacagctccatttgagcagtgctcg
ctcgccttgtctgccccgctacaatgtagttctagaacgccctgggtgcc
ttgccacactcatgaattaaaaggacgaagactaaagaaccaaaataggc
aataaagttgcttttaaagggccccaaagtccagtatgttgcttcctgta
attcgatgtcccaatcacaaggaacaactcctcttccccaaccccggaag
aatagaaaggtaaaggccagactgtgaaggggtgcgaaggggtgcgataa
agctaaggagtcagcacaagaagacgggacttctgtatcaattctgcact
tcctctgctgtcttcaaggacgtgtccttctgattggaaagagcaagata
aacattgctacggaagaaactaagacaaagttccacgtgttacttggagt
agcagttacttgtgcaattattgggaactcataaagagctcggggccaag
acacaggcaagaatcaagtttttcaaagtatggggatgaccgtgaccccc
ttggaagtaatggatttcatgtaataatatttttttttagcacttatgca
ccaggccccagtaaggcattgggtagaacagtaaaacacaatgaacaaaa
catctgcctcgtagaattgtaaagggaaggcagataagggctaagaaatg
gattgttacataccgctagaagagaagtgacctttgaagccattaaggat
ttagaagggaatggttacttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156767309_156768443
seq2: B6Ng01-007D13.b_46_1157

seq1  GAATTCCCTCTGAGGACTTGGATGAGGTGGAGCTGAGGATGCAGGGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTGAGGACTTGGATGAGGTGGAGCTGAGGATGCAGGGAAGG  50

seq1  AGGTGCGGGAGAGCCTTGGCCATGGGTGACAGGTTAGGGAAGAAAGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCGGGAGAGCCTTGGCCATGGGTGACAGGTTAGGGAAGAAAGATGG  100

seq1  CCTGAGGTCACCCATGGGCTGTCAGTGAGCCTCAGGCTGCAGCGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTCACCCATGGGCTGTCAGTGAGCCTCAGGCTGCAGCGAGAGAG  150

seq1  GAGCATGAGTAACGACCCAGCTCACTTCACGGGCTGCCCGATCCATAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGAGTAACGACCCAGCTCACTTCACGGGCTGCCCGATCCATAATG  200

seq1  CTCAGAGACCCACCGTGCTCTATGAATGTCACAGGCTGCTCCCTGTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGACCCACCGTGCTCTATGAATGTCACAGGCTGCTCCCTGTCTAA  250

seq1  GCGTGGGGGTCAGGACATCCACATACTAGACAGACATTTACATAAGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGGGTCAGGACATCCACATACTAGACAGACATTTACATAAGTCAG  300

seq1  GCTGGGGGAGGATTCCACAGCCACTGGCAACAGCGTTGTTAGTACTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGGAGGATTCCACAGCCACTGGCAACAGCGTTGTTAGTACTCTCC  350

seq1  ATCCAAAGCCAGGGGAGGCAATATTCCCTAAAGGGAAACCCATGTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGCCAGGGGAGGCAATATTCCCTAAAGGGAAACCCATGTGGGGA  400

seq1  CAGACAGACAGACAGACTGTTCAGAATCTGGTCTGCTGGTAGGCAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGACAGACTGTTCAGAATCTGGTCTGCTGGTAGGCAGAAAA  450

seq1  TATGTGCAAGATTTCATTTGCCTGGAATTGGATAAGTAGACTAGGCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCAAGATTTCATTTGCCTGGAATTGGATAAGTAGACTAGGCTAGC  500

seq1  CTGTCCCTGCCTTGAGCAGTGGGATGCCACCATGGCCAGCCCTGGATAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTGCCTTGAGCAGTGGGATGCCACCATGGCCAGCCCTGGATAGG  550

seq1  TTTTTCTTGTTTTTTTAAGACAGGTTTTCTTGGCTGTCGTGGAACTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGTTTTTTTAAGACAGGTTTTCTTGGCTGTCGTGGAACTCACT  600

seq1  TTGTAGACCAGGATGGTCTATACAGAGATCCTCCTATTTCTGCTTCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGACCAGGATGGTCTATACAGAGATCCTCCTATTTCTGCTTCCCAG  650

seq1  AGTGCTGGGATTAAAGGAAAGGCTACCAAGCCTGGCCTGGATAAGCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGAAAGGCTACCAAGCCTGGCCTGGATAAGCCTGT  700

seq1  CCTTATGCCAGTTCACCTCAGACTCTATCCTCCTCTCACATCTGGCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGCCAGTTCACCTCAGACTCTATCCTCCTCTCACATCTGGCTTAA  750

seq1  GGAACATAATTCTTTGGGCATACACTGTTCTACCCTTACTATC-TTTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAACATAATTCTTTGGGCATACACTGTTCTACCCTTACTATCTTTTTTT  800

seq1  TTTTTTAAACCCTCTATTATTGGTACATAGACTGTGTCACCTTTTTTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACCCTCTATTATTGGTACATAGACTGTGTCACCTTTTTTGTC  850

seq1  TTACAAT-GGTTTCACAGATATTCTGGCTTGGTGAGTTCTAGCTATATGA  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGGGTTTCACAGATATTCTGGCTTGGTGAGTTCTAGCTATATGA  900

seq1  CCTTAAATAACATATTGATTCACTTGGTGAGTTTAAGAGCAGTAGCTGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATAACATATTGATTCACTTGGTGAGTTTAAGAGCAGTAGCTGCT  950

seq1  ATACAGTAAGCATCGGATACGTGTTAATTTCTTTAAAGATCATTATTAAC  998
      ||||||| ||||||||||||||||| ||||||| |||||||||   ||||
seq2  ATACAGT-AGCATCGGATACGTGTT-ATTTCTTAAAAGATCAT--ATAAC  996

seq1  CCTCTGCCTAGAGCTACATCACTATAAAGTTCTCAGATACCAAAATACTG  1048
      |||||| |||||||||||||||||| ||||||| |||  |  ||||||| 
seq2  CCTCTG-CTAGAGCTACATCACTAT-AAGTTCT-AGAATC--AAATACT-  1040

seq1  GATATCATGGGTTTGAGTGTCAATAAAAATCTATGACACATGTGATAAAC  1098
      ||| ||||||  |||| ||||   | |||||||||  || |||||  |||
seq2  GATTTCATGG--TTGA-TGTC---ATAAATCTATG--ACCTGTGAATAAC  1082

seq1  AGGGTCATAGTCCTCTGGAGAAACTTCTTTCAGTGGC  1135
      | |  |  ||||||     ||||||||||||| ||||
seq2  ATGTCC--AGTCCT----TGAAACTTCTTTCA-TGGC  1112

seq1: chr2_156919501_156920518
seq2: B6Ng01-007D13.g_70_1091 (reverse)

seq1  TTAAGTGACCATTCCC-TCTAAATCCTTATTGCCTCCAAGTGTCACTTCT  49
      | |||| ||||||||| |||||||||||| || || |||  |||||||||
seq2  TAAAGTAACCATTCCCTTCTAAATCCTTAATGGCTTCAAAGGTCACTTCT  50

seq1  CTTTCTAGC-GTATGTAACATACCATTTCTTAGCCCTTTATCTGCCTTCC  98
      | ||||||| ||||||||||  |||||||||||||| |||||||||||||
seq2  C-TTCTAGCGGTATGTAACAATCCATTTCTTAGCCC-TTATCTGCCTTCC  98

seq1  CTCTACATGTCTCCGAGGCAGTTGTTTTGTTCATTGTGTTTTACTGTTCT  148
      || ||||  ||| |||||||| ||||||||||||||||||||||||||||
seq2  CTTTACAATTCTACGAGGCAGATGTTTTGTTCATTGTGTTTTACTGTTCT  148

seq1  ACCCAATGCCTAACT-GGGCCTGGTGCATAAGTGCTAAAAAAAAATATTA  197
      ||||||||||| ||| ||||||||||||||||||||||||||||||||||
seq2  ACCCAATGCCTTACTGGGGCCTGGTGCATAAGTGCTAAAAAAAAATATTA  198

seq1  TTACATGAAATCCATTACTTCC-AGGGGGTCACGGTCAT-CCCATACTTT  245
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  TTACATGAAATCCATTACTTCCAAGGGGGTCACGGTCATCCCCATACTTT  248

seq1  GAAAAACTTGATTCTTGCCTGTGTCTTGG-CCCGAGCTCTTTATGAGTTC  294
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAAAACTTGATTCTTGCCTGTGTCTTGGCCCCGAGCTCTTTATGAGTTC  298

seq1  CCAGTAATTGCACAAGTAACTGCTACTCCAAGTAACACGTGGAACTTTGT  344
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATTGCACAAGTAACTGCTACTCCAAGTAACACGTGGAACTTTGT  348

seq1  CTTAGTTTCTTCCGTAGCAATGTTTATCTTGCTCTTTCCAATCAGAAGGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTCTTCCGTAGCAATGTTTATCTTGCTCTTTCCAATCAGAAGGA  398

seq1  CACGTCCTTGAAGACAGCAGAGGAAGTGCAGAATTGATACAGAAGTCCCG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCCTTGAAGACAGCAGAGGAAGTGCAGAATTGATACAGAAGTCCCG  448

seq1  TCTTCTTGTGCTGACTCCTTAGCTTTATCGCACCCCTTCGCACCCCTTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTGCTGACTCCTTAGCTTTATCGCACCCCTTCGCACCCCTTCA  498

seq1  CAGTCTGGCCTTTACCTTTCTATTCTTCCGGGGTTGGGGAAGAGGAGTTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGGCCTTTACCTTTCTATTCTTCCGGGGTTGGGGAAGAGGAGTTG  548

seq1  TTCCTTGTGATTGGGACATCGAATTACAGGAAGCAACATACTGGACTTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTGATTGGGACATCGAATTACAGGAAGCAACATACTGGACTTTG  598

seq1  GGGCCCTTTAAAAGCAACTTTATTGCCTATTTTGGTTCTTTAGTCTTCGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTTTAAAAGCAACTTTATTGCCTATTTTGGTTCTTTAGTCTTCGT  648

seq1  CCTTTTAATTCATGAGTGTGGCAAGGCACCCAGGGCGTTCTAGAACTACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATTCATGAGTGTGGCAAGGCACCCAGGGCGTTCTAGAACTACA  698

seq1  TTGTAGCGGGGCAGACAAGGCGAGCGAGCACTGCTCAAATGGAGCTGTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCGGGGCAGACAAGGCGAGCGAGCACTGCTCAAATGGAGCTGTCT  748

seq1  CAGAGCTAGTAGATGCCTAGGGAAATCAATCAGGGGCTCTCTGCAATGGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTAGTAGATGCCTAGGGAAATCAATCAGGGGCTCTCTGCAATGGC  798

seq1  ACTCAGGCTGTAGGGTAAGAAATGACCCTTGGGGAGAAAAGCCTGGGTTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCTGTAGGGTAAGAAATGACCCTTGGGGAGAAAAGCCTGGGTTG  848

seq1  GGGAGGTCTGTGGACAGACGGGTCTGAACGTAGGGAGGCCCTAAGGCATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTCTGTGGACAGACGGGTCTGAACGTAGGGAGGCCCTAAGGCATG  898

seq1  AGCACCTTCAGGTGTTGGTGAAAAGGAAGGCCAGTGTGGCTCAGGTGCAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTCAGGTGTTGGTGAAAAGGAAGGCCAGTGTGGCTCAGGTGCAG  948

seq1  TACCTAAGGGGAGGAGAGGGCACGGAGGAAAGCAAGGATGGGGGCAGGTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAGGGGAGGAGAGGGCACGGAGGAAAGCAAGGATGGGGGCAGGTG  998

seq1  CACGCTGGCTGGAGGACTGAATTC  1018
      ||||||||||||||||||||||||
seq2  CACGCTGGCTGGAGGACTGAATTC  1022