BAC Information

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BAC

Clone NameB6Ng01-007E14
Chromosome2 (Build37)
Map Location 166,597,654 - 166,718,318
singlet/doubletdoublet
Overlap geneTrp53rk, Arfgef2
Upstream genePrkcbp1, LOC546780, Ncoa3, Sulf2, LOC670775, Ppia-ps2_2197.1, BC067047
Downstream geneLOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007E14.bB6Ng01-007E14.g
ACCDH843904DH843905
length1,076842
definitionDH843904|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E14, 5' end.DH843905|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(166,717,253 - 166,718,318)(166,597,654 - 166,598,496)
sequence
gaattccactattttagaggacatacgactattgtagccctctcttccct
ctttgtttctggggtgtgtgcacatcatctaggagaggaacctagagtag
tatcacatatgctaggcaagtgctccattactatactttgtacccagccc
tcctccccaaatggctgtccacattccattagagaacacaccaacactga
tatagagataactgatacacccacttgacagttaagatctctgaatgagc
tcctgagtgctgctgtcctatgctggagactgctgccttcctgcaaggtc
agggccacgtgctaaggtttcaggagtgaaaggcggcttgggggactcag
agtccagagtccagcagtaaaacatgcacaaggccaaattcacatccagc
atcaaagaaaaccacaaacctggggctccccagcctgccggtgataccca
ggaagcaggtggaaaccggcagcctactgcttgcactgcggcacgtgtgt
gggctgatcctgctaaccctatgatgcccctcttcctagaaagaaggaat
gaaagggtgccaggtctcacagttgatccttggacctccacccaggaggc
tcagtaacctaccctccgtctcaggactcagacggagatcagccccaggg
aggagttggaacgcaaagcagtggccctgcctgccctgctctgctcagga
ttgattctccaacctgaaagatgaggcagcagaaggaagccagcccatcc
agggctccttactgagtagatatctctccccctactcttttgtatgtaga
agttaactcaaagagatccattgctcctgtcccgtaagtgccagcataaa
aagcgttctcttattctttttccattcacagaattattgatgcaaattaa
caacggaaacaatcttacccttagaagtcgtgctggtatttcgtcccagg
aattccctgcggttctcatccaacgtacattctaaacaggatcctttaaa
caacaggccaggctgctggtttcttgtttgaaagaattgggttggatctt
gcccttgaagcctaaagataaaggca
gaattcactttgtagaccaggctggcctcgacctcagaaatccgcctgcc
tctgcttcctgagtgctgggatcaaaggcgtgcgccaccacgcccggctc
agccctgcctctttttaaagacagtatctcagccaagcgtggtagcacac
atttttagtcccagcattcgggaggcagaggcaggcagatctctaaaaga
tctggtctacatatggagttctaagcctgccaaggctatgtagtcagacc
ctgtctcaaaacaaaaacaaatacaaaaacaaaacccaccaaacaagcaa
acaagcagtgtctcgtgtatctcaggttgatctctgacttgcaatgtagc
caagactgtattcaaatacctggccctcttttgggttatttcacctcctg
tcatccagggaaacataccgacttgtgccctgcttttagtgactttgtga
tggccataaaccaaagacactctagacactcccaaggaacgaactgatgg
ataagctacagtatagcaagtcataaagtacaaacagccagaatgctttt
tgtgggttttttttatggtaaatctgcactaggaatttggaccagagagg
ggaaaggccaattgtaatgaaggccactgtgctgccataaacagtttacc
attaaagctgggctgaccaacagctccagggtccctctgcgtgaactctt
tgagactcactctgggtggcaccgtgccccagctgggggaggaatgactt
tgagacgcttagctccgatctactaccaactctgttctgcacagactggg
tagccatcctggaactgccaccctatatcccctgggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_166717253_166718318
seq2: B6Ng01-007E14.b_48_1123 (reverse)

seq1  TGCC-TTATCTCTAGGCTTCAAGGGCAAGTCCAAACCCAATCTTCTCAAA  49
      |||| |||||| |||||||||||||||||  | ||||||||  | |||||
seq2  TGCCTTTATCTTTAGGCTTCAAGGGCAAGATCCAACCCAATTCTTTCAAA  50

seq1  CAAGAAACCAGCAGCCTGGCCTGTTGTCT-AAGGATCCTGTTTAGAATGT  98
      ||||||||||||||||||||||||||| | ||||||||||||||||||||
seq2  CAAGAAACCAGCAGCCTGGCCTGTTGTTTAAAGGATCCTGTTTAGAATGT  100

seq1  ACGTT-GATGAGAACCGCAGGG-ATTCCTGGGACGAAATA-CAGCAGCGA  145
      ||||| |||||||||||||||| ||||||||||||||||| ||||| |||
seq2  ACGTTGGATGAGAACCGCAGGGAATTCCTGGGACGAAATACCAGCA-CGA  149

seq1  CTTCTAA-GGTAAGATTGTTTTCCGTTGTTATTTTGCATC-ATAATTCTG  193
      ||||||| |||||||||| |||||||||||| |||||||| |||||||||
seq2  CTTCTAAGGGTAAGATTG-TTTCCGTTGTTAATTTGCATCAATAATTCTG  198

seq1  TGAATGG-AAAAGAATAAGAG-ACGCTTTTTATGCTGGCACTTACGGGAC  241
      ||||||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAATGGAAAAAGAATAAGAGAACGCTTTTTATGCTGGCACTTACGGGAC  248

seq1  AGGAGCAATGGATCTCTTTGAGTT-ACTTCTACATACAAAAGAGTA-GGG  289
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  AGGAGCAATGGATCTCTTTGAGTTAACTTCTACATACAAAAGAGTAGGGG  298

seq1  GAGAGATATCTACTCAGTAAGGAGCCCTGGAT-GGCTGGCTTCCTTCTGC  338
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGAGATATCTACTCAGTAAGGAGCCCTGGATGGGCTGGCTTCCTTCTGC  348

seq1  TGCCTCATCTTTCAGGTTGGAGAATCAATCCTGAGCAGAGCAGGGCAGGC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATCTTTCAGGTTGGAGAATCAATCCTGAGCAGAGCAGGGCAGGC  398

seq1  AGGGCCACTGCTTTGCGTTCCAACTCCTCCCTGGGGCTGATCTCCGTCTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCACTGCTTTGCGTTCCAACTCCTCCCTGGGGCTGATCTCCGTCTG  448

seq1  AGTCCTGAGACGGAGGGTAGGTTACTGAGCCTCCTGGGTGGAGGTCCAAG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGAGACGGAGGGTAGGTTACTGAGCCTCCTGGGTGGAGGTCCAAG  498

seq1  GATCAACTGTGAGACCTGGCACCCTTTCATTCCTTCTTTCTAGGAAGAGG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACTGTGAGACCTGGCACCCTTTCATTCCTTCTTTCTAGGAAGAGG  548

seq1  GGCATCATAGGGTTAGCAGGATCAGCCCACACACGTGCCGCAGTGCAAGC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCATAGGGTTAGCAGGATCAGCCCACACACGTGCCGCAGTGCAAGC  598

seq1  AGTAGGCTGCCGGTTTCCACCTGCTTCCTGGGTATCACCGGCAGGCTGGG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCTGCCGGTTTCCACCTGCTTCCTGGGTATCACCGGCAGGCTGGG  648

seq1  GAGCCCCAGGTTTGTGGTTTTCTTTGATGCTGGATGTGAATTTGGCCTTG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCAGGTTTGTGGTTTTCTTTGATGCTGGATGTGAATTTGGCCTTG  698

seq1  TGCATGTTTTACTGCTGGACTCTGGACTCTGAGTCCCCCAAGCCGCCTTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTTTACTGCTGGACTCTGGACTCTGAGTCCCCCAAGCCGCCTTT  748

seq1  CACTCCTGAAACCTTAGCACGTGGCCCTGACCTTGCAGGAAGGCAGCAGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGAAACCTTAGCACGTGGCCCTGACCTTGCAGGAAGGCAGCAGT  798

seq1  CTCCAGCATAGGACAGCAGCACTCAGGAGCTCATTCAGAGATCTTAACTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCATAGGACAGCAGCACTCAGGAGCTCATTCAGAGATCTTAACTG  848

seq1  TCAAGTGGGTGTATCAGTTATCTCTATATCAGTGTTGGTGTGTTCTCTAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGGGTGTATCAGTTATCTCTATATCAGTGTTGGTGTGTTCTCTAA  898

seq1  TGGAATGTGGACAGCCATTTGGGGAGGAGGGCTGGGTACAAAGTATAGTA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTGGACAGCCATTTGGGGAGGAGGGCTGGGTACAAAGTATAGTA  948

seq1  ATGGAGCACTTGCCTAGCATATGTGATACTACTCTAGGTTCCTCTCCTAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCACTTGCCTAGCATATGTGATACTACTCTAGGTTCCTCTCCTAG  998

seq1  ATGATGTGCACACACCCCAGAAACAAAGAGGGAAGAGAGGGCTACAATAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGCACACACCCCAGAAACAAAGAGGGAAGAGAGGGCTACAATAG  1048

seq1  TCGTATGTCCTCTAAAATAGTGGAATTC  1066
      ||||||||||||||||||||||||||||
seq2  TCGTATGTCCTCTAAAATAGTGGAATTC  1076

seq1: chr2_166597654_166598496
seq2: B6Ng01-007E14.g_68_909

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGACCTCAGAAATCCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGACCTCAGAAATCCGCCTGCC  50

seq1  TCTGCTTCCTGAGTGCTGGGATCAAAGGCGTGCGCCACCACGCCCGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCTGAGTGCTGGGATCAAAGGCGTGCGCCACCACGCCCGGCTC  100

seq1  AGCCCTGCCTCTTTTTAAAGACAGTATCTCAGCCAAGCGTGGTAGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGCCTCTTTTTAAAGACAGTATCTCAGCCAAGCGTGGTAGCACAC  150

seq1  ATTTTTAGTCCCAGCATTCGGGAGGCAGAGGCAGGCAGATCTCTAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGTCCCAGCATTCGGGAGGCAGAGGCAGGCAGATCTCTAAAAGA  200

seq1  TCTGGTCTACATATGGAGTTCTAAGCCTGCCAAGGCTATGTAGTCAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTACATATGGAGTTCTAAGCCTGCCAAGGCTATGTAGTCAGACC  250

seq1  CTGTCTCAAAACAAAAACAAATACAAAAACAAAACCCACCAAACAAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAAAACAAAAACAAATACAAAAACAAAACCCACCAAACAAGCAA  300

seq1  ACAAGCAGTGTCTCGTGTATCTCAGGTTGATCTCTGACTTGCAATGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGTGTCTCGTGTATCTCAGGTTGATCTCTGACTTGCAATGTAGC  350

seq1  CAAGACTGTATTCAAATACCTGGCCCTCTTTTGGGTTATTTCACCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGTATTCAAATACCTGGCCCTCTTTTGGGTTATTTCACCTCCTG  400

seq1  TCATCCAGGGAAACATACCGACTTGTGCCCTGCTTTTAGTGACTTTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGGGAAACATACCGACTTGTGCCCTGCTTTTAGTGACTTTGTGA  450

seq1  TGGCCATAAACCAAAGACACTCTAGACACTCCCAAGGAACGAACTGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATAAACCAAAGACACTCTAGACACTCCCAAGGAACGAACTGATGG  500

seq1  ATAAGCTACAGTATAGCAAGTCATAAAGTACAAACAGCCAGAATGC-TTT  549
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAGCTACAGTATAGCAAGTCATAAAGTACAAACAGCCAGAATGCTTTT  550

seq1  TGTGGGTTTTTTTTATGGTAAATCTGCACTAGGAATTTGGACCAGAGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTTTTTTTTATGGTAAATCTGCACTAGGAATTTGGACCAGAGAGG  600

seq1  GGAAAGGCCAATTGTAATGAAGGCCACTGTGCTGCCATAAACAGTTTACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCCAATTGTAATGAAGGCCACTGTGCTGCCATAAACAGTTTACC  650

seq1  ATTAAAGCT-GGCTGACCAACAGCTCCAGGGTCCCTCTGCGTGAACTCTT  698
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGCTGGGCTGACCAACAGCTCCAGGGTCCCTCTGCGTGAACTCTT  700

seq1  TGAGACTCACTCTGGGTGGCACCGTGCCCCAGGCTGGGGGAGGAATGACT  748
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGAGACTCACTCTGGGTGGCACCGTGCCCCA-GCTGGGGGAGGAATGACT  749

seq1  TTGAGACGCTTAGCTCCGATTCTACTACCAACTCTGTTCTGCACAGACTG  798
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGAGACGCTTAGCTCCGA-TCTACTACCAACTCTGTTCTGCACAGACTG  798

seq1  GGTAGCCATCCTGGAACTGCCACCCTCACATCCCCTGGGAGGGAA  843
      |||||||||||||||||||||||||| | ||||||||||| ||||
seq2  GGTAGCCATCCTGGAACTGCCACCCT-ATATCCCCTGGGAAGGAA  842