BAC Information

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BAC

Clone NameB6Ng01-007F04
Chromosome2 (Build37)17 (Build37)
Map Location 170,920,261 - 170,920,63770,878,078 - 70,878,811
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfp217, Silg111, LOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5, LOC668955
Downstream geneLOC100043743, LOC100043744, Cbln4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007F04.bB6Ng01-007F04.g
ACCDH843928DH843929
length914739
definitionDH843928|Mus musculus domesticus DNA, BAC clone: B6Ng01-007F04, 5' end.DH843929|Mus musculus domesticus DNA, BAC clone: B6Ng01-007F04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(170,920,261 - 170,920,637)(70,878,078 - 70,878,811)
sequence
gaattcttttctctgttgtgggcagtacttgcttttggtgtgtctgtaac
cgtgatggatctggtgattcagccaaatctaataacatgcttgaatgctt
gaacattctctgggattccatatctggccattggcttgactaattctttt
aggtagaatcatttgtttaccacaccttttggcggtccatcagatttggt
ggtgctttacctctgagctacatacccagcccctgaaagacccagacttt
tcaggcctttactagctcagctcaaaccacccatcctacactcttatttc
cctttccccttctgcaaatcctcagagttagtcttctgtctgtctgtctt
tccttcttttcttttcttatcagggtctcactctgtagctacagctagcc
tacaagtcactatacagaccgagctgatctcaactcatagagatccacct
gtttctgaattaaaggtatgtatcaccatgcccagccatgtgaccgtctc
tctctctcttttttaaaattagatattttctttacttacatttcaaatgc
tattctgaaagttccctatatcccctccacccccgccctgctcctctacc
cactcactcccacttcttggccctggcgctcccctgtactggggcatata
aagtttgcaagactaaggggcctctcttcccaatgatggccgactaggcc
atcttctgatacatatgcagctagagacacgagctctgggggtactggtt
agttcatattgttgttccacctatagggttgcagaccccttcagctcctt
gggtactttctctagctcttccattgggggccctgtgttccatccaatag
ctgactgtgagcatccacttctgtatttgccaggcactggcatagcctca
caagagatagctat
gaattcatgggcttttcattctcgttctcttcttctctcattaagtagca
gaagtttagttggcttctctgagtgtcagaaaaagtaactgtcatttgtt
tgcaaatgaaacctgagctttctgcaaaggactcccctgcagattccgtc
ccccataacactcctccagccttccagttgatttgagatagtttcctgtt
ctcccacctcttggaaatattccatagcacgctgagcagacacttttagt
caaaaaaaaaaaaaacccacctataaatagctgattttcccttggccctg
ccctctctctgaggcattcatgaagcagtgaaccatccagcagaagcaag
agctctttgtgagggatctgtgctgaggctgacgaaaactcaaatccata
ggctgaaaattgtcttgggggttgatcttccttatttgacttgtgcactc
actgcacagaaaaagaaaatgaagagagagagagagagagagagagagag
agagaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
agagagagagagagagagagagagagagagatagagaaagagtaagagaa
agagaaagagaaagagaaagagaaagagaaagagaaagagaaagagaaag
agaaagagaaagagagaaagagagagaggaatgagaaggaaggaagaaag
gaagaaaggaagaaaggaaggaaggaacgaacgaaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_170920261_170920637
seq2: B6Ng01-007F04.b_379_796

seq1  TTCTGTCTGTCTGTCTTCTCTCATTCTCCTGTCT--------------TC  36
      |||||||||||||||||  ||  || || | |||              ||
seq2  TTCTGTCTGTCTGTCTTTCCTTCTTTTCTTTTCTTATCAGGGTCTCACTC  50

seq1  TGTAAC-ACAGGATAG------ACTCAGTATAGGAATCCTCCAGCCTCTG  79
      |||| | ||| | |||      | ||| ||||   | |   | |  ||| 
seq2  TGTAGCTACA-GCTAGCCTACAAGTCACTATACAGACCGAGCTG-ATCT-  97

seq1  CATCCC---GAGGGCTA---------GAATTATCGGCTTG--------TG  109
      || | |   |||  | |         ||||||  ||  ||        ||
seq2  CAACTCATAGAGATCCACCTGTTTCTGAATTAAAGGTATGTATCACCATG  147

seq1  CC---CTATGT---TTTCTTTTTCTTTTTTTCTTTTTATTAGATATTTTC  153
      ||   | ||||     ||| | ||| | ||| ||   |||||||||||||
seq2  CCCAGCCATGTGACCGTCTCTCTCTCTCTTTTTTAAAATTAGATATTTTC  197

seq1  TTTATATACATTTCAAATTTCAAATGCTATCCCGAAAGTTCCCTATACCC  203
      ||||  |||       |||||||||||||| | |||||||||||||| ||
seq2  TTTACTTAC-------ATTTCAAATGCTATTCTGAAAGTTCCCTATATCC  240

seq1  AC----CCCCTGCCCTGCTCCCCTACCCACCCACTCCTGCTTCTTGGCCC  249
       |    |||| |||||||||| |||||||| ||||||  |||||||||||
seq2  CCTCCACCCCCGCCCTGCTCCTCTACCCACTCACTCCCACTTCTTGGCCC  290

seq1  TGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAATACTAAGGGGCCT  299
      ||||  ||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGCGCTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACTAAGGGGCCT  340

seq1  CTCTTCCCAGTGATGGCCAACTAGACCATCTTCTGCTACATATGCAGCTA  349
      ||||||||| |||||||| ||||| |||||||||| ||||||||||||||
seq2  CTCTTCCCAATGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCTA  390

seq1  GAGACACGAGCTCTGGGGGTACTGGTTA  377
      ||||||||||||||||||||||||||||
seq2  GAGACACGAGCTCTGGGGGTACTGGTTA  418

seq1: chr17_70878078_70878811
seq2: B6Ng01-007F04.g_69_806

seq1  GAATTCATGGGCTTTTCATTCTCGTTCTCTTCTTCTCTCATTAAGTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGCTTTTCATTCTCGTTCTCTTCTTCTCTCATTAAGTAGCA  50

seq1  GAAGTTTAGTTGGCTTCTCTGAGTGTCAGAAAAAGTAACTGTCATTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTAGTTGGCTTCTCTGAGTGTCAGAAAAAGTAACTGTCATTTGTT  100

seq1  TGCAAATGAAACCTGAGCTTTCTGCAAAGGACTCCCCTGCAGATTCCGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGAAACCTGAGCTTTCTGCAAAGGACTCCCCTGCAGATTCCGTC  150

seq1  CCCCATAACACTCCTCCAGCCTTCCAGTTGATTTGAGATAGTTTCCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATAACACTCCTCCAGCCTTCCAGTTGATTTGAGATAGTTTCCTGTT  200

seq1  CTCCCACCTCTTGGAAATATTCCATAGCACGCTGAGCAGACACTTTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCTCTTGGAAATATTCCATAGCACGCTGAGCAGACACTTTTAGT  250

seq1  CAAAAAAAAAAAAAACCCACCTATAAATAGCTGATTTTCCCTTGGCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAACCCACCTATAAATAGCTGATTTTCCCTTGGCCCTG  300

seq1  CCCTCTCTCTGAGGCATTCATGAAGCAGTGAACCATCCAGCAGAAGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCTGAGGCATTCATGAAGCAGTGAACCATCCAGCAGAAGCAAG  350

seq1  AGCTCTTTGTGAGGGATCTGTGCTGAGGCTGACGAAAACTCAAATCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTGTGAGGGATCTGTGCTGAGGCTGACGAAAACTCAAATCCATA  400

seq1  GGCTGAAAATTGTCTTGGGGGTTGATCTTCCTTATTTGACTTGTGCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAATTGTCTTGGGGGTTGATCTTCCTTATTTGACTTGTGCACTC  450

seq1  ACTGCACAGAAAAAGAAAATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACAGAAAAAGAAAATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500

seq1  AGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  550

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAAAGAGAA  600
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAAAGAGTAAGAGAA  600

seq1  AGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAG  650

seq1  AGAAAGAGAAAGAGAGAAAGAGAGAGAGGAAGGAGAAGGAAGGAAGAAAG  700
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGAAAGAGAAAGAGAGAAAGAGAGAGAGGAATGAGAAGGAAGGAAGAAAG  700

seq1  GAAGAAAGGAAGAAAGGAAGGAAGGAAGGAAGGA----  734
      ||||||||||||||||||||||||||| ||| ||    
seq2  GAAGAAAGGAAGAAAGGAAGGAAGGAACGAACGAAGGA  738