BAC Information

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BAC

Clone NameB6Ng01-007G13
Chromosome2 (Build37)
Map Location 30,618,647 - 30,689,426
singlet/doubletdoublet
Overlap geneEG665645, 1700001O22Rik, 2610205E22Rik, Asb6
Upstream geneOTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114, Tbc1d13, Slc39a1-ps, Endog, D2Wsu81e, Ccbl1, 1700084E18Rik, Lrrc8a, Phyhd1, Dolk, Nup188, Sh3glb2, 5730472N09Rik, Dolpp1, Crat, Ppp2r4, Ier5l, Cstad
Downstream genePrrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007G13.bB6Ng01-007G13.g
ACCDH843985DH843986
length3501,023
definitionDH843985|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G13, 5' end.DH843986|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,618,647 - 30,618,996)(30,688,401 - 30,689,426)
sequence
agtgtggcaggacatcatggcagctagcaacaggaatgcaggcttgcgca
gaagttgaaggtctacagtgacacacttcctacaggaaagttacagctcc
taagcctcctcccaaccagggaccccgtgtgcaaatacacgagtttgtgg
aggacatttttattcgaacaacaccaattaatcaagaggcagaacagaaa
gagccacctgagtggtgggttgtgtcccacagctgtgagcaaaatatctg
tggggacaactaaatgcaagaatcatttatttttattcctgggtgagtct
atcatgaaagggagaggagagagggaagagagggaagagagagagaaaga

gaattctctgttccagcagagacatggactgggggaaagaaggaaacagc
aggccacatattgattccagatgtggccctctccagcaatttaattaagt
tccccagacagccaggagaggttcttagtgatcagatttcctggctccct
cctccagcagccatgggcccactgtctccctgacggatggcgacgggtcc
ttcctgccctgagtcagcttcgccaacagggtagggcacagataactggt
cttcccaggagcaagtgcccctggccccaatttctgtccatccctccttc
ccctacctccaggggtccaagccctcttgctggctcttggcaggcttggt
caggctctgctgagcaggcagagggtgccagcagggctctctcctaagag
aggccccccacccacccataccctgtgcttgccagagcttcaggccaagt
aggcaccagtgagcctctgtgatgggggaacctctggggccaggactctg
agccactcatctgccaccaacggagtaagcctcaagtcctctgtgcagtc
tgaccacagcgcagatggcacagaggtcgcggtgacttggtatttaggca
gatcttttggggacaggtctgggccatgtttgccagttgattacccacac
agggacctggaagtcacagtctgcaaatctggcagaccctgaaggaccct
gagaggaaactaacaaatctccctgctgcatccattgcttgggcggatag
gctttcaagctgagcaaaggccagccagagcccagggcccacagtccgtg
ctgtcccctggccagggtccctgggactctatgtactcatccctgttctc
tgggcttctgggtccctggggatacagcagctgggggattaaaggctgtg
cttgtttggagatgcggaagatgccatggggcaacctctcataaactcat
catgttcaacagaactgcccaccaaggaactagcctgggcccagctccac
tattatgaccaccccagagctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_30618647_30618996
seq2: B6Ng01-007G13.b_51_400

seq1  AGTGTGGCAGGACATCATGGCAGCTAGCAACAGGAATGCAGGCTTGCGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGCAGGACATCATGGCAGCTAGCAACAGGAATGCAGGCTTGCGCA  50

seq1  GAAGTTGAAGGTCTACAGTGACACACTTCCTACAGGAAAGTTACAGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGAAGGTCTACAGTGACACACTTCCTACAGGAAAGTTACAGCTCC  100

seq1  TAAGCCTCCTCCCAACCAGGGACCCCGTGTGCAAATACACGAGTTTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTCCTCCCAACCAGGGACCCCGTGTGCAAATACACGAGTTTGTGG  150

seq1  AGGACATTTTTATTCGAACAACACCAATTAATCAAGAGGCAGAACAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTTTTATTCGAACAACACCAATTAATCAAGAGGCAGAACAGAAA  200

seq1  GAGCCACCTGAGTGGTGGGTTGTGTCCCACAGCTGTGAGCAAAATATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCTGAGTGGTGGGTTGTGTCCCACAGCTGTGAGCAAAATATCTG  250

seq1  TGGGGACAACTAAATGCAAGAATCATTTATTTTTATTCCTGGGTGAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAACTAAATGCAAGAATCATTTATTTTTATTCCTGGGTGAGTCT  300

seq1  ATCATGAAAGGGAGAGGAGAGAGGGAAGAGAGGGAAGAGAGAGAGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAAGGGAGAGGAGAGAGGGAAGAGAGGGAAGAGAGAGAGAAAGA  350

seq1: chr2_30688401_30689426
seq2: B6Ng01-007G13.g_68_1090 (reverse)

seq1  GGAGCTCTGGGGTGGTCACTTATAGCTGAGCTGGGCCCAGGCTAGTTCCC  50
      |||||||||||||||||| | ||||  |||||||||||||||||||||| 
seq2  GGAGCTCTGGGGTGGTCA-TAATAGTGGAGCTGGGCCCAGGCTAGTTCCT  49

seq1  TGGTGGGCAG-TCTG-TGACCATGATGTGTATATTGAGAGGTTGCCCCAT  98
      |||||||||| |||| ||| ||||||| || || ||||||||||||||||
seq2  TGGTGGGCAGTTCTGTTGAACATGATGAGTTTA-TGAGAGGTTGCCCCAT  98

seq1  GGCATCTTCCGCATCTCCAAACAAAGCACAGGCCTTTAATTCCCCCAGCT  148
      |||||||||||||||||||||| ||||||| |||||||| ||||||||||
seq2  GGCATCTTCCGCATCTCCAAAC-AAGCACA-GCCTTTAA-TCCCCCAGCT  145

seq1  GCTGTATCCCCAGGGACCCAGAAGCCCAGGAGAACAGGGATGAAGTACAT  198
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  GCTGTATCCCCAGGGACCCAGAAGCCCA-GAGAACAGGGATG-AGTACAT  193

seq1  AGAGTCCCAGGGACCCTGGCCAGGGGACAGCACGGACTGTGGG-CCTGGG  247
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGAGTCCCAGGGACCCTGGCCAGGGGACAGCACGGACTGTGGGCCCTGGG  243

seq1  CTCTGGCTGGCCTTTGCTCAGCTTGAAAGCCTATCCGCCCAAGCAATGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGGCCTTTGCTCAGCTTGAAAGCCTATCCGCCCAAGCAATGGA  293

seq1  TGCAGCA-GGAGATTTGTTAGTTTCCTCTCAGGGTCCTTCAGGGTCTGCC  346
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGGGAGATTTGTTAGTTTCCTCTCAGGGTCCTTCAGGGTCTGCC  343

seq1  AGATTTGCAGACTGTGACTTCCAGGTCCCTGTGTGGGTAATCAACTGGCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGCAGACTGTGACTTCCAGGTCCCTGTGTGGGTAATCAACTGGCA  393

seq1  AACATGGCCCAGACCTGTCCCCAAAAGATCTGCCTAAATACCAAGTCACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGCCCAGACCTGTCCCCAAAAGATCTGCCTAAATACCAAGTCACC  443

seq1  GCGACCTCTGTGCCATCTGCGCTGTGGTCAGACTGCACAGAGGACTTGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACCTCTGTGCCATCTGCGCTGTGGTCAGACTGCACAGAGGACTTGAG  493

seq1  GCTTACTCCGTTGGTGGCAGATGAGTGGCTCAGAGTCCTGGCCCCAGAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTCCGTTGGTGGCAGATGAGTGGCTCAGAGTCCTGGCCCCAGAGG  543

seq1  TTCCCCCATCACAGAGGCTCACTGGTGCCTACTTGGCCTGAAGCTCTGGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCATCACAGAGGCTCACTGGTGCCTACTTGGCCTGAAGCTCTGGC  593

seq1  AAGCACAGGGTATGGGTGGGTGGGGGGCCTCTCTTAGGAGAGAGCCCTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGGGTATGGGTGGGTGGGGGGCCTCTCTTAGGAGAGAGCCCTGC  643

seq1  TGGCACCCTCTGCCTGCTCAGCAGAGCCTGACCAAGCCTGCCAAGAGCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCCTCTGCCTGCTCAGCAGAGCCTGACCAAGCCTGCCAAGAGCCA  693

seq1  GCAAGAGGGCTTGGACCCCTGGAGGTAGGGGAAGGAGGGATGGACAGAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGGGCTTGGACCCCTGGAGGTAGGGGAAGGAGGGATGGACAGAAA  743

seq1  TTGGGGCCAGGGGCACTTGCTCCTGGGAAGACCAGTTATCTGTGCCCTAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCCAGGGGCACTTGCTCCTGGGAAGACCAGTTATCTGTGCCCTAC  793

seq1  CCTGTTGGCGAAGCTGACTCAGGGCAGGAAGGACCCGTCGCCATCCGTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGCGAAGCTGACTCAGGGCAGGAAGGACCCGTCGCCATCCGTCA  843

seq1  GGGAGACAGTGGGCCCATGGCTGCTGGAGGAGGGAGCCAGGAAATCTGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAGTGGGCCCATGGCTGCTGGAGGAGGGAGCCAGGAAATCTGAT  893

seq1  CACTAAGAACCTCTCCTGGCTGTCTGGGGAACTTAATTAAATTGCTGGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGAACCTCTCCTGGCTGTCTGGGGAACTTAATTAAATTGCTGGAG  943

seq1  AGGGCCACATCTGGAATCAATATGTGGCCTGCTGTTTCCTTCTTTCCCCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCACATCTGGAATCAATATGTGGCCTGCTGTTTCCTTCTTTCCCCC  993

seq1  AGTCCATGTCTCTGCTGGAACAGAGAATTC  1026
      ||||||||||||||||||||||||||||||
seq2  AGTCCATGTCTCTGCTGGAACAGAGAATTC  1023