BAC Information

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BAC

Clone NameB6Ng01-007N10
Chromosome2 (Build37)
Map Location 31,959,528 - 32,134,053
singlet/doubletdoublet
Overlap genePpapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534
Upstream geneFnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058
Downstream gene2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007N10.bB6Ng01-007N10.g
ACCDH844290DH844291
length9951,000
definitionDH844290|Mus musculus domesticus DNA, BAC clone: B6Ng01-007N10, 5' end.DH844291|Mus musculus domesticus DNA, BAC clone: B6Ng01-007N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,133,057 - 32,134,053)(31,959,528 - 31,960,528)
sequence
gaattcttcctgctgtcccatttacctgagaaaggcaggtgacttgccca
ggtcacacagtagcgagtgtggaaggaatatgaatgaaagattgtgcttt
gtacggctacctctctgggttgagaaggaacaggttaaagttaggagtga
gagatgacagcattgttagtttacaaatttgaccatcatgattatgaaat
tcatgaggctggagacatggcttatgttggggcctgggataaacctcata
ctgaccactcagacaccagtcttgaatatctgatgaaagtttattgaatg
ctttcagactgatcgattaaggccacaagaagggaaacctaattgtggca
cctgtcctctggctagacttttttaatgaaaaaccagtttgattggtcct
cagtgcaggatagaaagggtggatgggtggttttagccaaagatgttaac
agagaaagcacagctctcccaaggccatgcataattctccttccttgagg
aacagcaagctaactgctccatggttttgcagaaccacctcagctaaaga
gcctctgtcattccaaaaatgaggtggctgaatgtaatttagccagatct
ttgtctgcctgttcactcaacagcctgaagttctgttgtcctgtaagtag
aacagtagttcccattgctgccgatcctgcaatgcccatcccagtcaaca
ctgccattacaaagtgtgcagctctcctagagcaagggcctggatacagg
cccataggatcctacctgctgtccctccatagtatgtaacctgagggacc
acatgaacaagcacatatgactcagcttgccagtgaaatgaactattgat
aaatggaaaaggtctatagtacatgcaaaccaagtgcctttagttgctgc
taggagattagtcttcataagtgtcaagagcatggcatattgattatgca
tatgcttgagtgaagtagcaatggattttttcttgttggcttttt
gaattcactatacagggcaagtcaggcctgccgagggcagtcacacaatc
tgtaggttcattctgggacctgctcccagtagcacaagctactcagctga
gctggtaccctggggctttgtgccctgggttctgatggtctccctggagt
cagcttcatgtgtgaactcctcaggtgataaagcaaaggctcagggatgt
ttacagtgaagagccacttgaatcaggagagtggaaagcagaccagaccc
acccaacagaaggctggcacggcatggaggtggaggggactcacaaaata
caggaaagctgctgactgcatgtgcacacccacagccgccgccgccgcca
cacatgcacatgagacggcagagcagggaactcaaagccaaaggacaggc
ccaccccagcctcccactgtgtccccccaacctgtctgcttcatgaacgc
tccccagggagatcactgttctttagaatgttgctttgactttttaaaaa
taactttttgcaaatgtggatatatcatacaaatgtcatctgaacctttc
gaagtaccctgttcattggcattaaacactactgtgcggggacagatgtc
gctgcaataatatccccagaagttcttcctcttgcaaaattggaatcccg
ccccatgaaaccctagctctccactgcagtcgctcccaaccccacacacc
caaactctacttctgtgtctgtgaaatcggctgctacaggtccctcatgt
gagggattatatggtatatcctgttttgtaaaataactatggatgggggc
agggtcttttgtagctcagactgcccttaaacacactatgtagccgggcc
tggccttgaacttcaaatctcccccctcgatttcctgattcgaagattac
ggagtgcaccaatgattcccacactgtgatgaggactgaacccccggtct
cttgtacgcatgcgtcatgtctatcacctagactccatccccagccgaaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32133057_32134053
seq2: B6Ng01-007N10.b_44_1038 (reverse)

seq1  AAAAAGCCAACAAAAAAAAAATCCATTGCCAACCTCACTCAAGCATATGC  50
      ||||||||||| || ||||||||||||| | || ||||||||||||||||
seq2  AAAAAGCCAAC-AAGAAAAAATCCATTG-CTACTTCACTCAAGCATATGC  48

seq1  -TAATCAATATGCCATGCTCCTGACACTTATGAAGACTAATCTCCTAGCA  99
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAATCAATATGCCATGCTCTTGACACTTATGAAGACTAATCTCCTAGCA  98

seq1  GCAACTAAAGGCACTTGGTTTGCATGTACTATAGACCTTTTCCATTTATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAAAGGCACTTGGTTTGCATGTACTATAGACCTTTTCCATTTATC  148

seq1  AATAGTTCATTTCACTGGCAAGCCTGAGTCATATGTGCTTGTTCATGTGG  199
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATAGTTCATTTCACTGGCAAG-CTGAGTCATATGTGCTTGTTCATGTGG  197

seq1  TCCCTCAGGTTACATACTATGGAGGGACAGCAGGTAGGATCCTATGGGCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGGTTACATACTATGGAGGGACAGCAGGTAGGATCCTATGGGCC  247

seq1  TGTATCCAGGCCCTTGCTCTAGGAGAGCTGCACACTTTGTAATGGCAGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCAGGCCCTTGCTCTAGGAGAGCTGCACACTTTGTAATGGCAGTG  297

seq1  TTGACTGGGATGGGCATTGCAGGATCGGCAGCAATGGGAACTACTGTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGGGATGGGCATTGCAGGATCGGCAGCAATGGGAACTACTGTTCT  347

seq1  ACTTACAGGACAACAGAACTTCAGGCTGTTGAGTGAACAGGCAGACAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGGACAACAGAACTTCAGGCTGTTGAGTGAACAGGCAGACAAAG  397

seq1  ATCTGGCTAAATTACATTCAGCCACCTCATTTTTGGAATGACAGAGGCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTAAATTACATTCAGCCACCTCATTTTTGGAATGACAGAGGCTC  447

seq1  TTTAGCTGAGGTGGTTCTGCAAAACCATGGAGCAGTTAGCTTGCTGTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGAGGTGGTTCTGCAAAACCATGGAGCAGTTAGCTTGCTGTTCC  497

seq1  TCAAGGAAGGAGAATTATGCATGGCCTTGGGAGAGCTGTGCTTTCTCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAGGAGAATTATGCATGGCCTTGGGAGAGCTGTGCTTTCTCTGT  547

seq1  TAACATCTTTGGCTAAAACCACCCATCCACCCTTTCTATCCTGCACTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTTTGGCTAAAACCACCCATCCACCCTTTCTATCCTGCACTGAG  597

seq1  GACCAATCAAACTGGTTTTTCATTAAAAAAGTCTAGCCAGAGGACAGGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATCAAACTGGTTTTTCATTAAAAAAGTCTAGCCAGAGGACAGGTG  647

seq1  CCACAATTAGGTTTCCCTTCTTGTGGCCTTAATCGATCAGTCTGAAAGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTAGGTTTCCCTTCTTGTGGCCTTAATCGATCAGTCTGAAAGCA  697

seq1  TTCAATAAACTTTCATCAGATATTCAAGACTGGTGTCTGAGTGGTCAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAACTTTCATCAGATATTCAAGACTGGTGTCTGAGTGGTCAGTA  747

seq1  TGAGGTTTATCCCAGGCCCCAACATAAGCCATGTCTCCAGCCTCATGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTATCCCAGGCCCCAACATAAGCCATGTCTCCAGCCTCATGAAT  797

seq1  TTCATAATCATGATGGTCAAATTTGTAAACTAACAATGCTGTCATCTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATCATGATGGTCAAATTTGTAAACTAACAATGCTGTCATCTCTC  847

seq1  ACTCCTAACTTTAACCTGTTCCTTCTCAACCCAGAGAGGTAGCCCTACAA  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTCCTAACTTTAACCTGTTCCTTCTCAACCCAGAGAGGTAGCCGTACAA  897

seq1  AGCACAATCTTTCATTCATATTCCTTCCACACTCGCTACTGTGTGACCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATCTTTCATTCATATTCCTTCCACACTCGCTACTGTGTGACCTG  947

seq1  GGCAAGTCACCTGCCTTTCTCAGGTAAATGGGACAGCAGGAAGAATTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCACCTGCCTTTCTCAGGTAAATGGGACAGCAGGAAGAATTC  995

seq1: chr2_31959528_31960528
seq2: B6Ng01-007N10.g_68_1067

seq1  GAATTCACTATACAGGGCAAGTCAGGCCTGCCGAGGGCAGTCACACAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATACAGGGCAAGTCAGGCCTGCCGAGGGCAGTCACACAATC  50

seq1  TGTAGGTTCATTCTGGGACCTGCTCCCAGTAGCACAAGCTACTCAGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTTCATTCTGGGACCTGCTCCCAGTAGCACAAGCTACTCAGCTGA  100

seq1  GCTGGTACCCTGGGGCTTTGTGCCCTGGGTTCTGATGGTCTCCCTGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACCCTGGGGCTTTGTGCCCTGGGTTCTGATGGTCTCCCTGGAGT  150

seq1  CAGCTTCATGTGTGAACTCCTCAGGTGAGAAAGCAGAGGCTCAGGGATGT  200
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CAGCTTCATGTGTGAACTCCTCAGGTGATAAAGCAAAGGCTCAGGGATGT  200

seq1  TTACAGTGAAGAGCCACTTGAATCAGGAGAGTGGAAAGCAGACCAGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTGAAGAGCCACTTGAATCAGGAGAGTGGAAAGCAGACCAGACCC  250

seq1  ACCCAACAGAAGGCTGGCACGGCATGGAGGTGGAGGGGACTCACAAGAGA  300
      |||||||||||||||||||||||||||||||||||||||||||||| | |
seq2  ACCCAACAGAAGGCTGGCACGGCATGGAGGTGGAGGGGACTCACAAAATA  300

seq1  CAGGAGAGCTGCTGACTGCATGTGCACACCCACAGCCGCCGCCGCCGCCA  350
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCTGCTGACTGCATGTGCACACCCACAGCCGCCGCCGCCGCCA  350

seq1  CACATGCACATGAGACGGCAGAGCAGGGAACTCAAAGCCAAAGGACAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCACATGAGACGGCAGAGCAGGGAACTCAAAGCCAAAGGACAGGC  400

seq1  CCACCCCAGCCTCCCACTGTGTCCCCCCAACCTGTCTGCTTCATGAACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCAGCCTCCCACTGTGTCCCCCCAACCTGTCTGCTTCATGAACGC  450

seq1  TCCCCAGGGAGATCACTGTTCTTTAGAATGTTGCTTTGACTTTTTAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGGAGATCACTGTTCTTTAGAATGTTGCTTTGACTTTTTAAAAA  500

seq1  TAACTTTTTGCAAATGTGGATATATAATAGAAATGTCATCTGAACCTTTC  550
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  TAACTTTTTGCAAATGTGGATATATCATACAAATGTCATCTGAACCTTTC  550

seq1  GAAGTACACTGTTCATTGGCATTAAACACTACTGTGCAGTGACAGATGTC  600
      ||||||| ||||||||||||||||||||||||||||| | ||||||||||
seq2  GAAGTACCCTGTTCATTGGCATTAAACACTACTGTGCGGGGACAGATGTC  600

seq1  GCTGCAGTTATATCCCCAGAAGTTCATCCTCTTACAGAATTGGAATTCCG  650
      |||||| | |||||||||||||||| ||||||| || ||||||||| |||
seq2  GCTGCAATAATATCCCCAGAAGTTCTTCCTCTTGCAAAATTGGAATCCCG  650

seq1  CCCCATGAAACCCTAGCTCTCCACTGCAGTCGCTCCCAACCCCACACACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGAAACCCTAGCTCTCCACTGCAGTCGCTCCCAACCCCACACACC  700

seq1  CAAACTCTACTTCTGTGTCTGTGAACTCAACTGCTCCAGGTCCCTCATGC  750
      ||||||||||||||||||||||||| ||  ||||| ||||||||||||| 
seq2  CAAACTCTACTTCTGTGTCTGTGAAATCGGCTGCTACAGGTCCCTCATGT  750

seq1  AAGGGATTCTATGGTATTTCCTATTTTGTAAAAATAACTAGGGATGGGGG  800
       ||||||| |||||||| |||| |||||| |||||||||| |||||||||
seq2  GAGGGATTATATGGTATATCCTGTTTTGT-AAAATAACTATGGATGGGGG  799

seq1  CAGGGTCTCTTGTAGCCCAGGCTGGCCTTAAACTCACTATGTAGCCAGGC  850
      |||||||| ||||||| ||| ||| |||||||| |||||||||||| |||
seq2  CAGGGTCTTTTGTAGCTCAGACTGCCCTTAAACACACTATGTAGCCGGGC  849

seq1  ATGGCCTTGAACTTCTAATCCTCCCACCTCCATTTCCTGAGTGGAAGATT  900
       |||||||||||||| ||| ||||| |||| ||||||||| | |||||||
seq2  CTGGCCTTGAACTTCAAAT-CTCCCCCCTCGATTTCCTGATTCGAAGATT  898

seq1  ACTGTGGTGCACCACTGTTTCACACACCGTGTTGAGGACTGAACCCAGGG  950
      || |  |||||||| || ||| ||||| ||| ||||||||||||||  ||
seq2  AC-GGAGTGCACCAATGATTCCCACACTGTGATGAGGACTGAACCCCCGG  947

seq1  CCCCATGTGCGCTT--GGCAGGGCATTCCACTAATCTACATCCCCAGCCG  998
       | | ||| ||| |  | || | |  ||  |||  || ||||||||||||
seq2  TCTCTTGTACGCATGCGTCATGTCTATCACCTAGACTCCATCCCCAGCCG  997

seq1  AAA  1001
      |||
seq2  AAA  1000