BAC Information

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BAC

Clone NameB6Ng01-008K17
Chromosome2 (Build37)
Map Location 46,815,240 - 46,977,467
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008K17.bB6Ng01-008K17.g
ACCDH844851DH844852
length5951,044
definitionDH844851|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K17, 5' end.DH844852|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,815,240 - 46,815,840)(46,976,421 - 46,977,467)
sequence
ttttttttgtttgtttgttttttgttttgttttgttttgtttttcaagac
agggtttttctgtatagccctggctgtcctggaactccctctgtagacca
ggctggccttgaactcagaaatccacctgcctctgcctcccgagtgctgg
gattaaaggtgtgcgccaccatgcccggctaattttggaattcttaaact
atactcaactccaataaaataaaaagcatgtggactgaacgatctgagcc
tttccatattattactaagtatttagttaatgccaatgtgtggcttttaa
accagaaagtacttcttcaaaatattaaaatttcctttaaacccacttta
tctttgttctataagctgtaatcattctgaaagtttgacataaacaaacc
atagaaaagcagagctaccagggactaaaccaccaaccaaagagtacaca
tggaggaccaatggctccagccatatctgtagcagaggatgacatggtat
ggcatcaaaggttgagaggcacttggtcctgtgaaggctcgatttcccag
tgtaggagaatcccagggtggtgaggtgagagtgggtaggtggga
gaattccaagttatgcaattagagttccaagttatgcaattgtttataaa
tgagacacatgtataaatatttacaattagggagttctttctattagcag
gtttaataaaaggagataatgcttttgcacaactaaatatttttaaagat
tttgtataattatataaacttatattataggatatatatagaaaatatat
ggaaaatacgactacatcttgtttcattaagaacgaatacttttaagata
acaaacaaacagagtgtgtgtgtgtgtgtatgtcgtcactagatcatatc
agttaaagtatttttaagttacaaatgaaaggtagaactttactgtcaag
tacattttaccgtttagttatatggtttgctgactctttactttatctgt
gccattaatgatgttcaatgatgtggtttgcagaaattaggatttcgttg
aaatgaccaagctgacatatgataggtgaagaatatgaattcttcatttt
aaattaacttaattaattatttcataatcatttggagtatttaatgtttc
attgctacttttaaataatttgttggatattcagataaatagacaattaa
aacttttcaagatgatgggtgcattaattatttttccataatgcatatca
agtttggcaaagaacaatgtgagaaactactatgacatcatgattcactt
ttgagaaatcctttttgtaatagattataattataaaacaaatttcttca
tacttaacagtcttttatgtgacatgatagcataatttgttacatattaa
tattatcaaggaattgcataagttctctgattacttaggaaaataacaga
atcacaaatggcaattacttaactgtaactcacttttacactgagaaaag
gttccacgcttgagctgtacgtaacatgacagtagcagcttcttacggca
cactgtggtaagaatctgggccatagaattgtacacataggaacacttgc
agatacaacaaatttgttactctagactgcacatcatttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46815240_46815840
seq2: B6Ng01-008K17.b_42_642

seq1  GAATTCTTTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTT  50

seq1  CAAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAACTCCCTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGGGTTTTTCTGTATAGCCCTGGCTGTCCTGGAACTCCCTCTGT  100

seq1  AGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAG  150

seq1  TGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCTAATTTTGGAATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCTAATTTTGGAATTCT  200

seq1  TAAACTATACTCAACTCCAATAAAATAAAAAGCATGTGGACTGAACGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATACTCAACTCCAATAAAATAAAAAGCATGTGGACTGAACGATC  250

seq1  TGAGCCTTTCCATATTATTACTAAGTATTTAGTTAATGCCAATGTGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTTCCATATTATTACTAAGTATTTAGTTAATGCCAATGTGTGGC  300

seq1  TTTTAAACCAGAAAGTACTTCTTCAAAATATTAAAATTTCCTTTAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACCAGAAAGTACTTCTTCAAAATATTAAAATTTCCTTTAAACCC  350

seq1  ACTTTATCTTTGTTCTATAAGCTGTAATCATTCTGAAAGTTTGACATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATCTTTGTTCTATAAGCTGTAATCATTCTGAAAGTTTGACATAAA  400

seq1  CAAACCATAGAAAAGCAGAGCTACCAGGGACTAAACCACCAACCAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATAGAAAAGCAGAGCTACCAGGGACTAAACCACCAACCAAAGAG  450

seq1  TACACATGGAGGACCAATGGCTCCAGCCATATCTGTAGCAGAGGATGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGGAGGACCAATGGCTCCAGCCATATCTGTAGCAGAGGATGACA  500

seq1  TGGTATGGCATCAAAGGTTGAGAGGCACTTGGTCCTGTGAAGGCTCGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGCATCAAAGGTTGAGAGGCACTTGGTCCTGTGAAGGCTCGATT  550

seq1  TCCCAGTGTAGGAGAATCCCAGGGTGGTGAGGTGAGAGTGGGTAGGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGTAGGAGAATCCCAGGGTGGTGAGGTGAGAGTGGGTAGGTGGG  600

seq1  A  601
      |
seq2  A  601

seq1: chr2_46976421_46977467
seq2: B6Ng01-008K17.g_69_1112 (reverse)

seq1  AAAACAAAATGTATGT-CAGTCTAGAGTGACAAATTTGCTTGTATCTGCA  49
      ||||| ||||| |||| ||||||||||| ||||||||| |||||||||||
seq2  AAAAC-AAATG-ATGTGCAGTCTAGAGTAACAAATTTG-TTGTATCTGCA  47

seq1  AGTGTTCCTATGTGTACAA-TCTATGGCCCAGATTCTTACCACAGTGTGC  98
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTGTTCCTATGTGTACAATTCTATGGCCCAGATTCTTACCACAGTGTGC  97

seq1  CGTAAGAAGCTGCTACTGTCATGTTACGTACAGCTCCAGCGTGGAAGCCT  148
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CGTAAGAAGCTGCTACTGTCATGTTACGTACAGCTCAAGCGTGGAA-CCT  146

seq1  TTTCTCAGTGTTAAAAGTGAGTTACAGTTAAGTAATTGCCATTTGTGATT  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTG-TAAAAGTGAGTTACAGTTAAGTAATTGCCATTTGTGATT  195

seq1  CTGTTATTTTCCTAAGTAATCAGAGAACTTATGCAATTCCTTGATAATAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATTTTCCTAAGTAATCAGAGAACTTATGCAATTCCTTGATAATAT  245

seq1  TAATATGTAACAAATTATGCTATCATGTCACATGAAAGACTGTTAAGTAT  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAATATGTAACAAATTATGCTATCATGTCACATAAAAGACTGTTAAGTAT  295

seq1  GAAGAAATTTGTTTTATAATTATAATCTATTACAAAAAGGATTTCTCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATTTGTTTTATAATTATAATCTATTACAAAAAGGATTTCTCAAA  345

seq1  AGTGAATCATGATGTCATAGTAGTTTCTCACATTGTTCTTTGCCAAACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATCATGATGTCATAGTAGTTTCTCACATTGTTCTTTGCCAAACTT  395

seq1  GATATGCATTATGGAAAAATAATTAATGCACCCATCATCTTGAAAAGTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCATTATGGAAAAATAATTAATGCACCCATCATCTTGAAAAGTTT  445

seq1  TAATTGTCTATTTATCTGAATATCCAACAAATTATTTAAAAGTAGCAATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTCTATTTATCTGAATATCCAACAAATTATTTAAAAGTAGCAATG  495

seq1  AAACATTAAATACTCCAAATGATTATGAAATAATTAATTAAGTTAATTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAAATACTCCAAATGATTATGAAATAATTAATTAAGTTAATTTA  545

seq1  AAATGAAGAATTCATATTCTTCACCTATCATATGTCAGCTTGGTCATTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAATTCATATTCTTCACCTATCATATGTCAGCTTGGTCATTTC  595

seq1  AACGAAATCCTAATTTCTGCAAACCACATCATTGAACATCATTAATGGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAATCCTAATTTCTGCAAACCACATCATTGAACATCATTAATGGCA  645

seq1  CAGATAAAGTAAAGAGTCAGCAAACCATATAACTAAACGGTAAAATGTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAAGTAAAGAGTCAGCAAACCATATAACTAAACGGTAAAATGTAC  695

seq1  TTGACAGTAAAGTTCTACCTTTCATTTGTAACTTAAAAATACTTTAACTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGTAAAGTTCTACCTTTCATTTGTAACTTAAAAATACTTTAACTG  745

seq1  ATATGATCTAGTGACGACATACACACACACACACACTCTGTTTGTTTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCTAGTGACGACATACACACACACACACACTCTGTTTGTTTGTT  795

seq1  ATCTTAAAAGTATTCGTTCTTAATGAAACAAGATGTAGTCGTATTTTCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAAGTATTCGTTCTTAATGAAACAAGATGTAGTCGTATTTTCCA  845

seq1  TATATTTTCTATATATATCCTATAATATAAGTTTATATAATTATACAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCTATATATATCCTATAATATAAGTTTATATAATTATACAAAA  895

seq1  TCTTTAAAAATATTTAGTTGTGCAAAAGCATTATCTCCTTTTATTAAACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAAATATTTAGTTGTGCAAAAGCATTATCTCCTTTTATTAAACC  945

seq1  TGCTAATAGAAAGAACTCCCTAATTGTAAATATTTATACATGTGTCTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATAGAAAGAACTCCCTAATTGTAAATATTTATACATGTGTCTCAT  995

seq1  TTATAAACAATTGCATAACTTGGAACTCTAATTGCATAACTTGGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACAATTGCATAACTTGGAACTCTAATTGCATAACTTGGAATTC  1044