BAC Information

Click to search

BAC

Clone NameB6Ng01-009F16
Chromosome2 (Build37)
Map Location 15,464,223 - 15,464,883
singlet/doubletsinglet
Overlap genenone
Upstream geneCacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b, LOC633061, LOC667329, LOC227588
Downstream geneLOC625457, Plxdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009F16.bB6Ng01-009F16.g
ACCDH845318DH845319
length1,158661
definitionDH845318|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F16, 5' end.DH845319|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaacgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagggtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggaggtagagaagtagccaggagctaaacggatctgcaaccctat
aggtggaacaacatatgactacagtacccggagctctgacttctagctgc
aatattatcaaagatggcctagtcgccatcactggaagagagtcatgact
gcacttatattgtccgttacaggcatccagggccaaaaggggaatggttg
gcagggga
gaattcagcagaagagggagtggggaggagagggggcaatgggtagaaat
gcctgaaactctctaggtacaggccaggaaataaataaacaattatatga
ttaaaagatgttacccctttttactaatattattatgagataatttttct
gtgctcatgaattaaaaataactttggaactccaaataagagtattgcac
aaatttgtcttaatatatttttacataaaatccaagtcaatttttttata
tgtgccctatttttctctcaaataatttcagagttgttatgtataacttg
tatgaactttaggatgtttctgttaaggtaaataagaagtgacgatgaca
aactgatgtaggttgattctaaaagcatacagacatctaagaatcataag
tggatagtgcaatcaccttgttttaattaatgttccattgctgtttagac
acatcatgacacagacagcttatgcaagcaagcatttaactgaaggattg
cttataattgcagaggttgagtctatgatgattacggtaggagcatagtg
gcaggcagacaagcatggtgctagagcagtagctgagagcttacatctca
gctgcaaattggaggcacagagggagagggagagagagagagagagagag
acagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15464223_15464883
seq2: B6Ng01-009F16.g_69_729

seq1  GAATTCAGCAGAAGAGGGAGTGGGGAGGAGAGGGGGCAATGGGTAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAAGAGGGAGTGGGGAGGAGAGGGGGCAATGGGTAGAAAT  50

seq1  GCCTGAAACTCTCTAGGTACAGGCCAGGAAATAAATAAACAATTATATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAACTCTCTAGGTACAGGCCAGGAAATAAATAAACAATTATATGA  100

seq1  TTAAAAGATGTTACCCCTTTTTACTAATATTATTATGAGATAATTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGATGTTACCCCTTTTTACTAATATTATTATGAGATAATTTTTCT  150

seq1  GTGCTCATGAATTAAAAATAACTTTGGAACTCCAAATAAGAGTATTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATGAATTAAAAATAACTTTGGAACTCCAAATAAGAGTATTGCAC  200

seq1  AAATTTGTCTTAATATATTTTTACATAAAATCCAAGTCAATTTTTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTCTTAATATATTTTTACATAAAATCCAAGTCAATTTTTTTATA  250

seq1  TGTGCCCTATTTTTCTCTCAAATAATTTCAGAGTTGTTATGTATAACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTATTTTTCTCTCAAATAATTTCAGAGTTGTTATGTATAACTTG  300

seq1  TATGAACTTTAGGATGTTTCTGTTAAGGTAAATAAGAAGTGACGATGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTTTAGGATGTTTCTGTTAAGGTAAATAAGAAGTGACGATGACA  350

seq1  AACTGATGTAGGTTGATTCTAAAAGCATACAGACATCTAAGAATCATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGTAGGTTGATTCTAAAAGCATACAGACATCTAAGAATCATAAG  400

seq1  TGGATAGTGCAATCACCTTGTTTTAATTAATGTTCCATTGCTGTTTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGTGCAATCACCTTGTTTTAATTAATGTTCCATTGCTGTTTAGAC  450

seq1  ACATCATGACACAGACAGCTTATGCAAGCAAGCATTTAACTGAAGGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGACACAGACAGCTTATGCAAGCAAGCATTTAACTGAAGGATTG  500

seq1  CTTATAATTGCAGAGGTTGAGTCTATGATGATTACGGTAGGAGCATAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATTGCAGAGGTTGAGTCTATGATGATTACGGTAGGAGCATAGTG  550

seq1  GCAGGCAGACAAGCATGGTGCTAGAGCAGTAGCTGAGAGCTTACATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGACAAGCATGGTGCTAGAGCAGTAGCTGAGAGCTTACATCTCA  600

seq1  GCTGCAAATTGGAGGCACAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAATTGGAGGCACAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAG  650

seq1  AGAGAGAGAGA  661
      | |||||||||
seq2  ACAGAGAGAGA  661