BAC Information

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BAC

Clone NameB6Ng01-009L15
Chromosome2 (Build37)15 (Build37)
Map Location 142,776,196 - 142,776,71125,250,049 - 25,250,995
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009L15.bB6Ng01-009L15.g
ACCDH845593DH845594
length1,032941
definitionDH845593|Mus musculus domesticus DNA, BAC clone: B6Ng01-009L15, 5' end.DH845594|Mus musculus domesticus DNA, BAC clone: B6Ng01-009L15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,196 - 142,776,711)(25,250,049 - 25,250,995)
sequence
gaattctttgttcagttctcagccccattttttaatggggttatttgcat
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtctttcccttgcagaaactttggagtttcat
taggtcccgtttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagacaagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtctggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggctttttgttattccagacga
atttgcaaattggtccttctaattcattgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatcttttcatcttc
tgagatcttctttattttctttccttcagagattgaagttttatcataca
gatccttctacttcctagtagagtcacgccagaatattttatattatttg
tggactatgagaaggggtgttccctaattctctctagcctggtatcctgt
atgaagataggcctttgacttgtttgagttta
gaattctttaagtagattggagattgtactcttctaactggcactctact
tgtaaagcaagcctaccgtggtttccttttacatatatggtggatccacc
tctctctcttcccttcttgtctatttctgtttgacttttagatactatta
ctgacatgatcttgactttggagacttgctgtcctactctgctgacttta
atcatggtgggagcagtctggcaattctgcccatcagatactctcatcgt
ctccctcctgactccttccttccacccaactctctctcttttcaatacag
ctttgccaccagtttgatcctctacaaaatgttatgcttcctttagattt
accttttccaaatgacccctttgaccagtgttccccttaaaccccgtctt
cttgcaggttcttaattacgtgccaagcagccagaaattagttacatctt
tacccaaaggcaaactggaaagggagaactacagggtagttttgcattct
tgggcttactcacactggttcatccgggaaataaaactgtcagcacaaca
tgtctgggtacagaacagagaatgatggcatggcgcacaattcaaaggat
tgccgcaggctaaagccacgatggaagttttaattaaaccaaaacggtca
gacacgggtgagtgccctagaatggaacaccatcactattcatgttaatt
ttaaatgtgaatatatgaaggctcttgcacgcattatttcataattaatt
ttttttcataagttacaaatttcccagatagttcctaaaggaaggctgga
gaggacaattcattgaacgacatttggtatttcagaagttcttttcttag
tcattatatttgtggccaccacatgggtttttttttgtttgtttgtttgt
ttgttttgtttgtttttctttgaaatggtttccagagtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776196_142776711
seq2: B6Ng01-009L15.b_573_1078 (reverse)

seq1  TAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCT  50
      |||||||||||||||||| ||||| |||  ||||  || || | ||||||
seq2  TAAACTCAAACAAGTCAAAGGCCTATCTTCATAC--AGGAT-ACCAGGCT  47

seq1  GAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGT-CACAAATAATA  99
       ||| || |||||||| ||||   |||||||| ||||| |||||||||||
seq2  -AGAGAG-AATTAGGG-AACA--CCCCTTCTC-ATAGTCCACAAATAATA  91

seq1  TAAAATATCTCGGCGTGACTCTAACTAAGGAAGT-GAAAGATCTGTATGA  148
      ||||||||   ||||||||||| ||| ||||||| ||| |||||||||||
seq2  TAAAATATTCTGGCGTGACTCT-ACT-AGGAAGTAGAAGGATCTGTATGA  139

seq1  TAAAAACTTCAAGTCTCTGAA-GAAAGAAATTAAAGAAGATCTCAGAAGA  197
      | |||||||||| |||||||| |||||||| |||||||||||||||||||
seq2  T-AAAACTTCAA-TCTCTGAAGGAAAGAAAATAAAGAAGATCTCAGAAGA  187

seq1  TGGAAGGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAAT  247
      || || ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAAT  237

seq1  GGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAA  287

seq1  TTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATC  347
      ||||||||||||||||||| |||||||||||| |||||||||||||| ||
seq2  TTCCAACTCAATTCTTCAATGAATTAGAAGGACCAATTTGCAAATTCGTC  337

seq1  TGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAG  397
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGAATAACAAAAAGCCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAG  387

seq1  AACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAA  447
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACCTCTGGTGGAATCACCATGCCAGACCTAAAGCTTTACTACAGAGCAA  437

seq1  TTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAA  487

seq1  TGGAATAGAATTGAAGACC  516
      |||||||||||||||||||
seq2  TGGAATAGAATTGAAGACC  506

seq1: chr15_25250049_25250995
seq2: B6Ng01-009L15.g_69_1009 (reverse)

seq1  TACACTCTTGAAAACCATATACAAAAGAAAAAACAAAACAAAACAAACAA  50
      ||||||| || ||||||| |   |||||||||   |||||||||||||||
seq2  TACACTC-TGGAAACCATTT--CAAAGAAAAA--CAAACAAAACAAACAA  45

seq1  ACAAACAAACAAAAAAAAACCCATGGTGGTGGCCACAAATATAATGACTA  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACAAACAAACAAAAAAAAACCCAT-GTGGTGGCCACAAATATAATGACTA  94

seq1  AGAAAAGAACTTCTGAAATACCAAATGTCGTTCAATGAATTGTCCTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAACTTCTGAAATACCAAATGTCGTTCAATGAATTGTCCTCTCC  144

seq1  AGCCTTCCTTTAGGAACTATCTGGGAAATTTGTAACTTATG-AAAAAAAT  199
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCCTTCCTTTAGGAACTATCTGGGAAATTTGTAACTTATGAAAAAAAAT  194

seq1  TAATTATGAAATAATGCGTGCAAGAGCCTTCATATATTCACATTTAAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAAATAATGCGTGCAAGAGCCTTCATATATTCACATTTAAAAT  244

seq1  TAACATGAATAGTGATGGTGTTCCATTCTAGGGCACTCACCCGTGTCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGAATAGTGATGGTGTTCCATTCTAGGGCACTCACCCGTGTCTGA  294

seq1  CCGTTTTGGTTTAATTAAAACTTCCATCGTGGCTTTAGCCTGCGGCAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTGGTTTAATTAAAACTTCCATCGTGGCTTTAGCCTGCGGCAATC  344

seq1  CTTTGAATTGTGCGCCATGCCATCATTCTCTGTTCTGTACCCAGACATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATTGTGCGCCATGCCATCATTCTCTGTTCTGTACCCAGACATGT  394

seq1  TGTGCTGACAGTTTTATTTCCCGGATGAACCAGTGTGAGTAAGCCCAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGACAGTTTTATTTCCCGGATGAACCAGTGTGAGTAAGCCCAAGA  444

seq1  ATGCAAAACTACCCTGTAGTTCTCCCTTTCCAGTTTGCCTTTGGGTAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAACTACCCTGTAGTTCTCCCTTTCCAGTTTGCCTTTGGGTAAAG  494

seq1  ATGTAACTAATTTCTGGCTGCTTGGCACGTAATTAAGAACCTGCAAGAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACTAATTTCTGGCTGCTTGGCACGTAATTAAGAACCTGCAAGAAG  544

seq1  ACGGGGTTTAAGGGGAACACTGGTCAAAGGGGTCATTTGGAAAAGGTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGTTTAAGGGGAACACTGGTCAAAGGGGTCATTTGGAAAAGGTAAA  594

seq1  TCTAAAGGAAGCATAACATTTTGTAGAGGATCAAACTGGTGGCAAAGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGAAGCATAACATTTTGTAGAGGATCAAACTGGTGGCAAAGCTG  644

seq1  TATTGAAAAGAGAGAGAGTTGGGTGGAAGGAAGGAGTCAGGAGGGAGACG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAAGAGAGAGAGTTGGGTGGAAGGAAGGAGTCAGGAGGGAGACG  694

seq1  ATGAGAGTATCTGATGGGCAGAATTGCCAGACTGCTCCCACCATGATTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGTATCTGATGGGCAGAATTGCCAGACTGCTCCCACCATGATTAA  744

seq1  AGTCAGCAGAGTAGGACAGCAAGTCTCCAAAGTCAAGATCATGTCAGTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCAGAGTAGGACAGCAAGTCTCCAAAGTCAAGATCATGTCAGTAA  794

seq1  TAGTATCTAAAAGTCAAACAGAAATAGACAAGAAGGGAAGAGAGAGAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCTAAAAGTCAAACAGAAATAGACAAGAAGGGAAGAGAGAGAGGT  844

seq1  GGATCCACCATATATGTAAAAGGAAACCACGGTAGGCTTGCTTTACAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCACCATATATGTAAAAGGAAACCACGGTAGGCTTGCTTTACAAGT  894

seq1  AGAGTGCCAGTTAGAAGAGTACAATCTCCAATCTACTTGGGAGAATTC  947
      ||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AGAGTGCCAGTTAGAAGAGTACAATCTCCAATCTACTT-AAAGAATTC  941