BAC Information

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BAC

Clone NameB6Ng01-010G03
Chromosome2 (Build37)
Map Location 15,797,575 - 15,836,455
singlet/doubletdoublet
Overlap genenone
Upstream geneCacnb2, LOC100041220, Nsun6, Arl5b, LOC633061, LOC667329, LOC227588
Downstream geneLOC625457, Plxdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G03.bB6Ng01-010G03.g
ACCDH846065DH846066
length1,186777
definitionDH846065|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G03, 5' end.DH846066|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,797,575 - 15,798,779)(15,835,676 - 15,836,455)
sequence
gaattcagtgttttagtgttcacttagcataaattactgtttgtcctggg
aaattgcttgagtagctatttcaagaggactgtaattttgccatctttat
tgcctttctaaagaaatcttgttttaatatgtgcatgcactggctactct
taaatgttttcaataacttggattatatatataaatgcattactgttttt
taaatgccttagtcatttagacaacacacataatccaataaacagaccca
gaaatttagtttttttgtaatatagaatatattttaaaatcttagatata
atgttttataatctttccagtgtatatggtttaaatttcatttatgttaa
tattataactcatgtcggataaattaaaatttgaatataacagtctactt
gataaatgctcacataaaaatttttgggattggtataaatctgagtggta
caattactgcagtaaactgtcagatgttatgagaatcttagggaatatat
tgcctgaagtttcatgcagagtttaagacagttacattttaacttaatat
tatataagcagtttctgttgctacctaagtaaccaatcagtagaagcagc
tatacctgcacatcacaggtatacatgtatatgcttgcagacattgttaa
ttgtagtttatggactcaaaactcagcttagtctttgtcgtaagcagtcc
tttacagttcaccatcttcatggtccaagataacagtatgaacccttcag
atagcaataggtataaattagttttttattacatattttctttatttaca
tttctaattttataccctttcttcatttcccctccgaaatcccctatcca
atcctccctccccctgctcactaacccactcactcccacttccctgtact
ggcattcccatacactggggcatagagccttcacaagacaaagggctctc
ttctcattgatgccccaaaaatgtcatcctctgctacatttgtggctgga
gcttggagtcctccattgtgtactcttttgtggtgtttagtccctgggat
ctctcggggtattggtggttcagacacatgaagctcagaaaaagaaagac
caaggtgggatctcagtcttctaagaataggaacatggagaccactcgct
attaaagaatgattttagaatctaggcaatgatgga
gaattctattgtagttatgaaacatcttttggaattcaacttgactactt
acagtctttaagtttaacctgatttttttcccatttgtctttcatatcta
agacctggaatgccctgtgagtcccacagatgtgaggacaaagaccattg
acccaaatcatgggcaaattaattaaagcaagcttttttattcatgtaca
tgggctatctcttcctgaggtatatttcaagatatcagcattagacatgg
ggaagataagggttttgttttgttttgtttttgtttgtttgattgctttg
ttttgtttttctggctgaggaaaggtgatttacaaatgggcaactaggca
ggcaaatagatggcattacagaagcagaacataaacacaatgagttggtt
ataacaatctgttgaaacaaaggcattgttgcaacacgctcatgactaca
gggtcataatggtttccctttcccggaacaggaaatattgaaccatttgt
agtaaagttacatagcacaatttttgagaaatagatttaatcataaacag
ggatgaacctagtttgtttttttctataagatgtctttcaagcctaagat
ggaggcaagctgttttatgatgctctgctttagcaaaggaacaagaatga
aaatataaacaagaatggacccagccttggtcctgtgaacattctatgcc
ctagtataggggaatgtcagggcctggaatgggagtgggtaggttgggga
acaggggagggtaggaggggatgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15797575_15798779
seq2: B6Ng01-010G03.b_47_1232

seq1  GAATTCAGTGTTTTAGTGTTCACTTAGCATAAATTACTGTTTGTCCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTTTAGTGTTCACTTAGCATAAATTACTGTTTGTCCTGGG  50

seq1  AAATTGCTTGAGTAGCTATTTCAAGAGGACTGTAATTTTGCCATCTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTGAGTAGCTATTTCAAGAGGACTGTAATTTTGCCATCTTTAT  100

seq1  TGCCTTTCTAAAGAAATCTTGTTTTAATATGTGCATGCACTGGCTACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCTAAAGAAATCTTGTTTTAATATGTGCATGCACTGGCTACTCT  150

seq1  TAAATGTTTTCAATAACTTGGATTATATATATAAATGCATTACTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTTCAATAACTTGGATTATATATATAAATGCATTACTGTTTTT  200

seq1  TAAATGCCTTAGTCATTTAGACAACACACATAATCCAATAAACAGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCTTAGTCATTTAGACAACACACATAATCCAATAAACAGACCCA  250

seq1  GAAATTTAGTTTTTTTGTAATATAGAATATATTTTAAAATCTTAGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAGTTTTTTTGTAATATAGAATATATTTTAAAATCTTAGATATA  300

seq1  ATGTTTTATAATCTTTCCAGTGTATATGGTTTAAATTTCATTTATGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATAATCTTTCCAGTGTATATGGTTTAAATTTCATTTATGTTAA  350

seq1  TATTATAACTCATGTCGGATAAATTAAAATTTGAATATAACAGTCTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAACTCATGTCGGATAAATTAAAATTTGAATATAACAGTCTACTT  400

seq1  GATAAATGCTCACATAAAAATTTTTGGGATTGGTATAAATCTGAGTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGCTCACATAAAAATTTTTGGGATTGGTATAAATCTGAGTGGTA  450

seq1  CAATTACTGCAGTAAACTGTCAGATGTTATGAGAATCTTAGGGAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACTGCAGTAAACTGTCAGATGTTATGAGAATCTTAGGGAATATAT  500

seq1  TGCCTGAAGTTTCATGCAGAGTTTAAGACAGTTACATTTTAACTTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAAGTTTCATGCAGAGTTTAAGACAGTTACATTTTAACTTAATAT  550

seq1  TATATAAGCAGTTTCTGTTGCTACCTAAGTAACCAATCAGTAGAAGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGCAGTTTCTGTTGCTACCTAAGTAACCAATCAGTAGAAGCAGC  600

seq1  TATACCTGCACATCACAGGTATACATGTATATGCTTGCAGACATTGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTGCACATCACAGGTATACATGTATATGCTTGCAGACATTGTTAA  650

seq1  TTGTAGTTTATGGACTCAAAACTCAGCTTAGTCTTTGTCGTAAGCAGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTTATGGACTCAAAACTCAGCTTAGTCTTTGTCGTAAGCAGTCC  700

seq1  TTTACAGTTCACCATCTTCATGGTCCAAGATAACAGTATGAACCCTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTTCACCATCTTCATGGTCCAAGATAACAGTATGAACCCTTCAG  750

seq1  ATAGCAATAGGTATAAATTAGTTTTTTATTACATATTTTCTTTATTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATAGGTATAAATTAGTTTTTTATTACATATTTTCTTTATTTACA  800

seq1  TTTCTAATTTTATACCCTTTCTTCATTTCCCCTCCGAAATCCCCTATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATTTTATACCCTTTCTTCATTTCCCCTCCGAAATCCCCTATCCA  850

seq1  ATCCTCCCTCCCCCTGCTCACTAACCCACTCACTCCCACTTCCCTGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCCTCCCCCTGCTCACTAACCCACTCACTCCCACTTCCCTGTACT  900

seq1  GGCATTCCCATACACTGGGGCATAGAGCCCTCACAAGACCAAGGGCCTCT  950
      ||||||||||||||||||||||||||||| ||||||||| ||||| ||||
seq2  GGCATTCCCATACACTGGGGCATAGAGCCTTCACAAGACAAAGGG-CTCT  949

seq1  CCTCTCATTGATGCCCCCACAATGTCATCCTCTGCTACATATGTGGCTGG  1000
      | ||||||||||||||| | |||||||||||||||||||| |||||||||
seq2  CTTCTCATTGATGCCCCAAAAATGTCATCCTCTGCTACATTTGTGGCTGG  999

seq1  AGCCTTGAGTCCCTCCA-TGTGTACTCTTTGGTTGGTGTTTTAGTCCCTG  1049
      ||| | |||| |||||| |||||||||||| | ||||| |||||||||||
seq2  AGCTTGGAGT-CCTCCATTGTGTACTCTTTTG-TGGTG-TTTAGTCCCTG  1046

seq1  GGATCTCTCGGGGTATTGGTTGTTTCAGACCACATGAAGCTCAAGAAGAA  1099
      ||||||||||||||||||| || |||||| |||||||||||| |||| ||
seq2  GGATCTCTCGGGGTATTGG-TGGTTCAGA-CACATGAAGCTC-AGAAAAA  1093

seq1  AGAAGACCACAGTGTGGATACTTCAGTCCTTCTTAAGAATAGGAATCAAT  1149
        |||||||  ||| ||||   ||||| |||| ||||||||||||   ||
seq2  GAAAGACCAAGGTG-GGAT--CTCAGT-CTTC-TAAGAATAGGAA--CAT  1136

seq1  GGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCA  1199
      |||| || |||| ||||||  ||||||||| |||| |||    |||||||
seq2  GGAG-ACCACTC-GCTATT--AAAGAATGATTTTA-GAA---TCTAGGCA  1178

seq1  A--ATGGA  1205
      |  |||||
seq2  ATGATGGA  1186

seq1: chr2_15835676_15836455
seq2: B6Ng01-010G03.g_64_840 (reverse)

seq1  TTCCCCTATCCCCTCCTACCCTCCTCCTGTTCCCCAACCTACCCACTCCC  50
      |||||  ||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCC--ATCCCCTCCTACCCTCC-CCTGTTCCCCAACCTACCCACTCCC  47

seq1  ATTCCAGGCCCTGACATTCCCCTATACTAGGGCATAGAATGTTCACAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGCCCTGACATTCCCCTATACTAGGGCATAGAATGTTCACAGGA  97

seq1  CCAAGGCTGGGTCCATTCTTGTTTATATTTTCATTCTTGTTCCTTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCTGGGTCCATTCTTGTTTATATTTTCATTCTTGTTCCTTTGCTA  147

seq1  AAGCAGAGCATCATAAAACAGCTTGCCTCCATCTTAGGCTTGAAAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGCATCATAAAACAGCTTGCCTCCATCTTAGGCTTGAAAGACAT  197

seq1  CTTATAGAAAAAAACAAACTAGGTTCATCCCTGTTTATGATTAAATCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAAAAAAACAAACTAGGTTCATCCCTGTTTATGATTAAATCTAT  247

seq1  TTCTCAAAAATTGTGCTATGTAACTTTACTACAAATGGTTCAATATTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAAATTGTGCTATGTAACTTTACTACAAATGGTTCAATATTTCC  297

seq1  TGTTCCGGGAAAGGGAAACCATTATGACCCTGTAGTCATGAGCGTGTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCGGGAAAGGGAAACCATTATGACCCTGTAGTCATGAGCGTGTTGC  347

seq1  AACAATGCCTTTGTTTCAACAGATTGTTATAACCAACTCATTGTGTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGCCTTTGTTTCAACAGATTGTTATAACCAACTCATTGTGTTTAT  397

seq1  GTTCTGCTTCTGTAATGCCATCTATTTGCCTGCCTAGTTGCCCATTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTTCTGTAATGCCATCTATTTGCCTGCCTAGTTGCCCATTTGTA  447

seq1  AATCACCTTTCCTCAGCCAGAAAAACAAAACAAAGCAATCAAACAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTTTCCTCAGCCAGAAAAACAAAACAAAGCAATCAAACAAACAA  497

seq1  AAACAAAACAAAACAAAACCCTTATCTTCCCCATGTCTAATGCTGATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAACCCTTATCTTCCCCATGTCTAATGCTGATATC  547

seq1  TTGAAATATACCTCAGGAAGAGATAGCCCATGTACATGAATAAAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATACCTCAGGAAGAGATAGCCCATGTACATGAATAAAAAAGCT  597

seq1  TGCTTTAATTAATTTGCCCATGATTTGGGTCAATGGTCTTTGTCCTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAATTAATTTGCCCATGATTTGGGTCAATGGTCTTTGTCCTCACA  647

seq1  TCTGTGGGACTCACAGGGCATTCCAGGTCTTAGATATGAAAGACAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGACTCACAGGGCATTCCAGGTCTTAGATATGAAAGACAAATGG  697

seq1  GAAAAAAATCAGGTTAAACTTAAAGACTGTAAGTAGTCAAGTTGAATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATCAGGTTAAACTTAAAGACTGTAAGTAGTCAAGTTGAATTCC  747

seq1  AAAAGATGTTTCATAACTACAATAGAATTC  780
      ||||||||||||||||||||||||||||||
seq2  AAAAGATGTTTCATAACTACAATAGAATTC  777