BAC Information

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BAC

Clone NameB6Ng01-011F01
Chromosome2 (Build37)
Map Location 135,079,859 - 135,219,821
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011F01.bB6Ng01-011F01.g
ACCDH846733DH846734
length1,1651,083
definitionDH846733|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F01, 5' end.DH846734|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,079,859 - 135,081,009)(135,218,734 - 135,219,821)
sequence
gaattccatatacattagccaccgagaggaactcctctccttttcatttc
acttccctataattctaaaaggatgcattgtcaggacttctgggataacg
ggatgttgcatgaactctgtaccacatgcttatgtagaagtttcctttcc
cttccaatttagactcacggagtatctaagcaacaagtaagcccttatct
aaatcattaggtactggtggggcctctgggcctctggagataactaacca
tgtcccagttgcactgagattggaaagctactttctaacatacgatgaaa
tcatagtgaaggactgagctcatttgtcatccaattcttattccaaactt
tagaaaactaaacaaattagaaagcgtgctagttggttgtggtattgcat
acctgcagtgcctacaatcaggagcagagactgaggtcactctaagtccc
aggccatccctgggctgcagaatgagactgtatcttcgaaacaaaactaa
ctaaacaaacaaacaaacaagaaaaagttctttaagaaataaaatgaaag
gaaagattttgctaggtcacaagaatacctgttccaataccaattttgct
ctccttagtgcatgtgaccagttattctggaaagattgtctgcacagttc
aggccctttcgctctatttcctttcttttcttctctgtttgagatggggt
tgcactggagatcaaacccagggcttctgtcagaactcaagagtgttgag
ctctggcaatccctcttcacaccattcccttcattgtgttgagtgaatta
aaatactcagacatactcactattgcttttctggtagcagctttggtgta
agggaagacagaacaatgtaatttcctgttgttgacttgaccaatagtca
ccaagctccttccgcacacccacaggcactgagcgaatggtgaggccctg
ggttccaagaacagtaatgtatttggaaaagaataagtcaataaatataa
ccaagaagatgcattcgtaaatggcaagagtgctgatttaaaatagaatg
ggtgctggccctgaaaagaaatattccattctttaaagaaacagtgcaca
aaggcctgagtcctagaaggagcttgtactcagactgaggaactgaacca
tcactcacactcagc
gaattctgttgaaaaggaactgaatgtctatcaagaatgtctattatttt
taacttaataagtctcagtgagactcacaacgggcaacttgatctcatgt
caaatcaagggtcaaaatatttatttcttgtgtaaattgcctgtgagaat
cacacacctctattttatttatttatttgtgatgctctcagaagttacat
gccaagagagcagacactgtgtgctcatttagaatggagacaaagaacga
attccacctatcacaaggttctgctacctgttgcaatgtgggggcagtcc
aaattaggcttacacactggggccatcatctgctttccatcaaagaggga
ccaaagactgaagatgctggtcctgataagccatgttctcctttgaatgt
tttattacaggttagtaagaacaagggggactcggggcttcatctggaac
ctgagtttgctgctgagtgaaggccccacaaagctctattttatatgaac
catttaaggcaccttgttccctattgggccagtaaaatgtattgccactg
aagtactgtggctttcaccaactggtggttcgaatttctttcttacgtta
aacttttttttcttttttttttaatttgatattttctttatttacatttc
aaatgttatcccctttcctggtttcccctccaaaaactccctatcttctc
cctctccccctgctcaccaacccacccactcctgcttccagaggatggtc
taggcagtcatcaatgggaggagaggctcttggtcctatgaaggttctat
gttaaatttttaaaatctccttttacttttaacaggataagaatttgttt
atctacaaggaagaaagggcatgcagataagtctagagtagagtgttcta
aaaagaacttcctccttgttaggaccatgagtgtggatgccaccgtgtgc
ctattgcacgaatgaagccaatgaagccggtgaattattatattcaataa
tatgctgaattgcactgaaaaagagaggatgcctatatagtggatttttt
tctatagcaattaatggtgcatctatcagggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_135079859_135081009
seq2: B6Ng01-011F01.b_42_1206

seq1  GAATTCCATATACATTAGCCACCGAGAGGAACTCCTCTCCTTTTCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATACATTAGCCACCGAGAGGAACTCCTCTCCTTTTCATTTC  50

seq1  ACTTCCCTATAATTCTAAAAGGATGCATTGTCAGGACTTCTGGGATAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTATAATTCTAAAAGGATGCATTGTCAGGACTTCTGGGATAACG  100

seq1  GGATGTTGCATGAACTCTGTACCACATGCTTATGTAGAAGTTTCCTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGCATGAACTCTGTACCACATGCTTATGTAGAAGTTTCCTTTCC  150

seq1  CTTCCAATTTAGACTCACGGAGTATCTAAGCAACAAGTAAGCCCTTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATTTAGACTCACGGAGTATCTAAGCAACAAGTAAGCCCTTATCT  200

seq1  AAATCATTAGGTACTGGTGGGGCCTCTGGGCCTCTGGAGATAACTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTAGGTACTGGTGGGGCCTCTGGGCCTCTGGAGATAACTAACCA  250

seq1  TGTCCCAGTTGCACTGAGATTGGAAAGCTACTTTCTAACATACGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGTTGCACTGAGATTGGAAAGCTACTTTCTAACATACGATGAAA  300

seq1  TCATAGTGAAGGACTGAGCTCATTTGTCATCCAATTCTTATTCCAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTGAAGGACTGAGCTCATTTGTCATCCAATTCTTATTCCAAACTT  350

seq1  TAGAAAACTAAACAAATTAGAAAGCGTGCTAGTTGGTTGTGGTATTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTAAACAAATTAGAAAGCGTGCTAGTTGGTTGTGGTATTGCAT  400

seq1  ACCTGCAGTGCCTACAATCAGGAGCAGAGACTGAGGTCACTCTAAGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAGTGCCTACAATCAGGAGCAGAGACTGAGGTCACTCTAAGTCCC  450

seq1  AGGCCATCCCTGGGCTGCAGAATGAGACTGTATCTTCGAAACAAAACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCCCTGGGCTGCAGAATGAGACTGTATCTTCGAAACAAAACTAA  500

seq1  CTAAACAAACAAACAAACAAGAAAAAGTTCTTTAAGAAATAAAATGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAACAAACAAACAAGAAAAAGTTCTTTAAGAAATAAAATGAAAG  550

seq1  GAAAGATTTTGCTAGGTCACAAGAATACCTGTTCCAATACCAATTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTTTGCTAGGTCACAAGAATACCTGTTCCAATACCAATTTTGCT  600

seq1  CTCCTTAGTGCATGTGACCAGTTATTCTGGAAAGATTGTCTGCACAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGTGCATGTGACCAGTTATTCTGGAAAGATTGTCTGCACAGTTC  650

seq1  AGGCCCTTTCGCTCTATTTCCTTTCTTTTCTTCTCTGTTTGAGATGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTTTCGCTCTATTTCCTTTCTTTTCTTCTCTGTTTGAGATGGGGT  700

seq1  TGCACTGGAGATCAAACCCAGGGCTTCTGTCAGAACTCAAGAGTGTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGAGATCAAACCCAGGGCTTCTGTCAGAACTCAAGAGTGTTGAG  750

seq1  CTCTGGCAATCCCTCTTCACACCATTCCCTTCATTGTGTTGAGTGAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCAATCCCTCTTCACACCATTCCCTTCATTGTGTTGAGTGAATTA  800

seq1  AAATACTCAGACATACTCACTATTGCTTTTCTGGTAGCAGCTTTGGTGT-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAATACTCAGACATACTCACTATTGCTTTTCTGGTAGCAGCTTTGGTGTA  850

seq1  AGGGAAGACAGAACAATGTAA-TTCCTGTTGTTGACTTGACCAATAGTCA  898
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGGAAGACAGAACAATGTAATTTCCTGTTGTTGACTTGACCAATAGTCA  900

seq1  CCAAGCTCCTTCCGCACACCCACAGGCACTGAGCGAATGGTGAGGCCCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTCCTTCCGCACACCCACAGGCACTGAGCGAATGGTGAGGCCCTG  950

seq1  GGTTCCAAGAACAGTAATGTATTTGG-AGAGAATTAGTCAATAAATAT-A  996
      |||||||||||||||||||||||||| | ||||| ||||||||||||| |
seq2  GGTTCCAAGAACAGTAATGTATTTGGAAAAGAATAAGTCAATAAATATAA  1000

seq1  CCAAG-AGATGCATTCGTAAATGGAAAGAAGTGCTG-TTTAAAATAGAAT  1044
      ||||| |||||||||||||||||| ||| ||||||| |||||||||||||
seq2  CCAAGAAGATGCATTCGTAAATGGCAAG-AGTGCTGATTTAAAATAGAAT  1049

seq1  GGGTGCT-GCCCTGAGAAGAAA-AATCCATTCTATAAA-AGACAGTGCAC  1091
      ||||||| ||||||| |||||| | |||||||| |||| | |||||||||
seq2  GGGTGCTGGCCCTGAAAAGAAATATTCCATTCTTTAAAGAAACAGTGCAC  1099

seq1  AAAGGCCTGAGTCTAGGGAGGAGTTTG-AC-CAG-CAGAGGAA-TG-ACC  1136
      |||||||||||||   | ||||| ||| || ||| | |||||| || |||
seq2  AAAGGCCTGAGTCCTAGAAGGAGCTTGTACTCAGACTGAGGAACTGAACC  1149

seq1  A-CACTCACACTCAGC  1151
      | ||||||||||||||
seq2  ATCACTCACACTCAGC  1165

seq1: chr2_135218734_135219821
seq2: B6Ng01-011F01.g_65_1147 (reverse)

seq1  GAACCTGAT-GATGCACAATCATTTGCTTATAGCAAAAAAATTCCACTAT  49
      || |||||| ||||||| || | |||| |||||  |||||| ||||||||
seq2  GACCCTGATAGATGCACCATTAATTGC-TATAG--AAAAAAATCCACTAT  47

seq1  ATAGCATCCCTCCTCT-TTTTTCAGTGCAATTCAGCATATTATTGAATAT  98
      ||||    | |||||| |||||||||||||||||||||||||||||||||
seq2  ATAG---GCATCCTCTCTTTTTCAGTGCAATTCAGCATATTATTGAATAT  94

seq1  AATAATTCACCCGCCTTCATCTGCTTCATTCTGTGCAATAGGCACACGCT  148
      ||||||||| ||| ||||||  ||||||||| |||||||||||||||| |
seq2  AATAATTCA-CCGGCTTCATTGGCTTCATTC-GTGCAATAGGCACACGGT  142

seq1  GGCATCCACACTCATGGTCCTAACAAGGAGGAAGTTCTTTTTAGAACACT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCACACTCATGGTCCTAACAAGGAGGAAGTTCTTTTTAGAACACT  192

seq1  CTTACTCTAGACTTATCTGCATG-CCTTTCTTCCTTGTAGATAAACAAAT  247
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  C-TACTCTAGACTTATCTGCATGCCCTTTCTTCCTTGTAGATAAACAAAT  241

seq1  TCTTAT-CTGTTAAAAGTAAAAGGAGATTTTAAAAATTTAACATAGAACC  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCTGTTAAAAGTAAAAGGAGATTTTAAAAATTTAACATAGAACC  291

seq1  TTCATAGGACCAAGAGCCTCTCCTCCCATTGATGACTGCCTAGACCATCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGGACCAAGAGCCTCTCCTCCCATTGATGACTGCCTAGACCATCC  341

seq1  TCTGGAAGCAGGAGTGGGTGGGTTGGTGAGCAGGGGGAGAGGGAGAAGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGCAGGAGTGGGTGGGTTGGTGAGCAGGGGGAGAGGGAGAAGAT  391

seq1  AGGGAGTTTTTGGAGGGGAAACCAGGAAAGGGGATAACATTTGAAATGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTTTTGGAGGGGAAACCAGGAAAGGGGATAACATTTGAAATGTA  441

seq1  AATAAAGAAAATATCAAATTAAAAAAAAAAGAAAAAAAAGTTTAACGTAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAAATATCAAATTAAAAAAAAAAGAAAAAAAAGTTTAACGTAA  491

seq1  GAAAGAAATTCGAACCACCAGTTGGTGAAAGCCACAGTACTTCAGTGGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAATTCGAACCACCAGTTGGTGAAAGCCACAGTACTTCAGTGGCA  541

seq1  ATACATTTTACTGGCCCAATAGGGAACAAGGTGCCTTAAATGGTTCATAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTACTGGCCCAATAGGGAACAAGGTGCCTTAAATGGTTCATAT  591

seq1  AAAATAGAGCTTTGTGGGGCCTTCACTCAGCAGCAAACTCAGGTTCCAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGCTTTGTGGGGCCTTCACTCAGCAGCAAACTCAGGTTCCAGA  641

seq1  TGAAGCCCCGAGTCCCCCTTGTTCTTACTAACCTGTAATAAAACATTCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCCCGAGTCCCCCTTGTTCTTACTAACCTGTAATAAAACATTCAA  691

seq1  AGGAGAACATGGCTTATCAGGACCAGCATCTTCAGTCTTTGGTCCCTCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACATGGCTTATCAGGACCAGCATCTTCAGTCTTTGGTCCCTCTT  741

seq1  TGATGGAAAGCAGATGATGGCCCCAGTGTGTAAGCCTAATTTGGACTGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAAAGCAGATGATGGCCCCAGTGTGTAAGCCTAATTTGGACTGCC  791

seq1  CCCACATTGCAACAGGTAGCAGAACCTTGTGATAGGTGGAATTCGTTCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATTGCAACAGGTAGCAGAACCTTGTGATAGGTGGAATTCGTTCTT  841

seq1  TGTCTCCATTCTAAATGAGCACACAGTGTCTGCTCTCTTGGCATGTAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCATTCTAAATGAGCACACAGTGTCTGCTCTCTTGGCATGTAACT  891

seq1  TCTGAGAGCATCACAAATAAATAAATAAAATAGAGGTGTGTGATTCTCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGCATCACAAATAAATAAATAAAATAGAGGTGTGTGATTCTCAC  941

seq1  AGGCAATTTACACAAGAAATAAATATTTTGACCCTTGATTTGACATGAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATTTACACAAGAAATAAATATTTTGACCCTTGATTTGACATGAGA  991

seq1  TCAAGTTGCCCGTTGTGAGTCTCACTGAGACTTATTAAGTTAAAAATAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGCCCGTTGTGAGTCTCACTGAGACTTATTAAGTTAAAAATAAT  1041

seq1  AGACATTCTTGATAGACATTCAGTTCCTTTTCAACAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCTTGATAGACATTCAGTTCCTTTTCAACAGAATTC  1083