BAC Information

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BAC

Clone NameB6Ng01-011J02
Chromosome2 (Build37)
Map Location 159,049,362 - 159,050,282
singlet/doubletsinglet
Overlap genenone
Upstream geneD630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
Downstream geneLOC100043689
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011J02.bB6Ng01-011J02.g
ACCDH846915DH846916
length1,246922
definitionDH846915|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J02, 5' end.DH846916|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacataagaggaaaggaaccaacggtcctgcccagagaagatg
cctgtgaagcacaacaatgaccagcaaagcactaggaccctaacaggatg
gtagtgacatgcataccttgacagtaactaacagctctctaattggattt
aagaactgctcaataagagacaaatctttcctgatactgcaaacctaccc
aactactcaaggctagtgaagttatgaatcttggatgagaacttacaact
accactttactaagccagcatggtccctaactacattctaaatatttgtc
cttgtatctacagataagcagtcttcatccctcattaaggaaagttctct
ttacaacagatgaatgctatcacagaaaaccacaattgatcaaaatgcag
agttttggagctcagccctaattgatacatctaccaaaccactctgtcac
tgaaggctcagggacgttggagaagagggactggaaagaatggaagagcc
agagaggcagggagttttctgtgagactgtcttttaggaacgtctgaaac
tactacagccatacaatttcaccaacatgtctctctatacatgagctgaa
tgaggatgacagtagacatgatgacatggacagcgggaaagtcaatgagg
ccttggctctacacaaagaactacatgtcccagcttcttggatgagccac
agtcagggaatgaataagaaatgcagtatcagctaaccacagccccactg
tgttgtgtctcagacgtaccatctactgtttctgctgctttctactcttc
cttgtcactgatgtggataaacacaaactaaatgacctcaccatctgcat
ctgtagagactgggaaaagtcgcatccagtgcaaatgctatcaaggctcc
tgcatcttttctcataggctttctgctcacttcaaagtcaatttcctgag
gacatcatggctgtcgccttagcactcctggtgactaaaggtcaacttgc
ttcaactaaggacactaagcttcaacttggttcttgattttctgctgact
gctgttgtctcttcctggccaaattctcttactacagcaacattttcttc
catgacagactgatcagaggactacctatgagttatttcttctttgaaag
caggctggacattccagtcttcctgaagttcgaagtgtaccactaataat
gaagaatcccgacactactaggtgagtggatgaagaaaggatgcta
gaattctatggcggtatctaatcccctcttcttgatgatgctagctattt
caataaagccaccaaaaatatcttctgatccaaagtcccatgaattcctt
gcaaacagtaaagatttctcctgttttattcttttgttgtggtttcaaga
tgtggtgtttatcccagactgactctgggtattacagtatatgtgaaatt
gtctgggaatttatggaaaacacagggtacgaatgtcaaaggtagataca
cagctgcagacaccaaacaagtcctaaggcccagtccattgctccgctgc
cgcacccctgtgcatccttaagcatgctttcatcacttgttcaatatttt
ctttaaccgtgttcccttagtctattcattcacagctggtttactgactt
aagtgtaggtatgcatatttctttcatctcatcttttgtattatatatga
tgatccattcttctaatccacttaatgactctgctcaattttaacttatg
tgttcattcgttcaatcactcagcagacacatttcaaacacccattctgc
aagcatcaagttttggacctttaaaggaaaagcttgttggagattagttc
tgcttatttatcacattcactgcacttcaagctttctatcgcccatgatt
gcactattactgcaataatgtgacaagtaagtttatatgccatgtataga
aagatggtgttgatttgtgtctctacaactaacacactaatctattagat
attataataaaaatacatttaggaaaaaaactgataaagtaattctcatt
ttgtttttgttaatataaaccagctcttttttactcggaaaaccatttct
ttaacttcctagcatctttaaaaaaaatagcaagcattataatagatgtg
atgaatggggtggacatttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159049362_159050282
seq2: B6Ng01-011J02.g_66_987

seq1  GAATTCTATGGCGGTATCTAATCCCCTCTTCTTGATGATGCTAGCTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGCGGTATCTAATCCCCTCTTCTTGATGATGCTAGCTATTT  50

seq1  CAATAAAGCCACCAAAAATATCTTCTGATCCAAAGTCCCATGAATTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGCCACCAAAAATATCTTCTGATCCAAAGTCCCATGAATTCCTT  100

seq1  GCAAACAGTAAAGATTTCTCCTGTTTTATTCTTTTGTTGTGGTTTCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGTAAAGATTTCTCCTGTTTTATTCTTTTGTTGTGGTTTCAAGA  150

seq1  TGTGGTGTTTATCCCAGACTGACTCTGGGTATTACAGTATATGTGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTTTATCCCAGACTGACTCTGGGTATTACAGTATATGTGAAATT  200

seq1  GTCTGGGAATTTATGGAAAACACAGGGTACGAATGTCAAAGGTAGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGAATTTATGGAAAACACAGGGTACGAATGTCAAAGGTAGATACA  250

seq1  CAGCTGCAGACACCAAACAAGTCCTAAGGCCCAGTCCATTGCTCCGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCAGACACCAAACAAGTCCTAAGGCCCAGTCCATTGCTCCGCTGC  300

seq1  CGCACCCCTGTGCATCCTTAAGCATGCTTTCATCACTTGTTCAATATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCCCTGTGCATCCTTAAGCATGCTTTCATCACTTGTTCAATATTTT  350

seq1  CTTTAACCGTGTTCCCTTAGTCTATTCATTCACAGCTGGTTTACTGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACCGTGTTCCCTTAGTCTATTCATTCACAGCTGGTTTACTGACTT  400

seq1  AAGTGTAGGTATGCATATTTCTTTCATCTCATCTTTTGTATTATATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAGGTATGCATATTTCTTTCATCTCATCTTTTGTATTATATATGA  450

seq1  TGATCCATTCTTCTAATCCACTTAATGACTCTGCTCAATTTTAACTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCATTCTTCTAATCCACTTAATGACTCTGCTCAATTTTAACTTATG  500

seq1  TGTTCATTCGTTCAATCACTCAGCAGACACATTTCAAACACCCATTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTCGTTCAATCACTCAGCAGACACATTTCAAACACCCATTCTGC  550

seq1  AAGCATCAAGTTTTGGACCTTTAAAGGAAAAGCTTGTTGGAGATTAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCAAGTTTTGGACCTTTAAAGGAAAAGCTTGTTGGAGATTAGTTC  600

seq1  TGCTTATTTATCACATTCACTGCACTTCAAGCTTTCTATCGCCCATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTTATCACATTCACTGCACTTCAAGCTTTCTATCGCCCATGATT  650

seq1  GCACTATTACTGCAATAATGTGACAAGTAAGTTTATATGCCATGTATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATTACTGCAATAATGTGACAAGTAAGTTTATATGCCATGTATAGA  700

seq1  AAGATGGTGTTGATTTGTGTCTCTACAACTAACACACTAATCTATTAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTGTTGATTTGTGTCTCTACAACTAACACACTAATCTATTAGAT  750

seq1  ATTATAATAAAAATACATTTAGGAAAAAAACTGATAAAGTAATTCTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATAAAAATACATTTAGGAAAAAAACTGATAAAGTAATTCTCATT  800

seq1  TTGTTTTTGTTAATATAAACCAGCTCTTTTTTACTCAGGAAAACCA-TTC  849
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  TTGTTTTTGTTAATATAAACCAGCTCTTTTTTACTC-GGAAAACCATTTC  849

seq1  TTTAACTTCCTAGCATCTTTAAAAAAAATAGCAAGCATTATAATAGATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTCCTAGCATCTTTAAAAAAAATAGCAAGCATTATAATAGATGT  899

seq1  GATGAAT-GAGTGGACATTTGTG  921
      ||||||| | |||||||||||||
seq2  GATGAATGGGGTGGACATTTGTG  922