BAC Information

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BAC

Clone NameB6Ng01-011L21
Chromosome2 (Build37)
Map Location 116,992,341 - 117,152,960
singlet/doubletdoublet
Overlap geneSpred1, LOC624574, 2610510H03Rik, Rasgrp1
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L21.bB6Ng01-011L21.g
ACCDH847040DH847041
length1,1061,042
definitionDH847040|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L21, 5' end.DH847041|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,992,341 - 116,993,450)(117,151,912 - 117,152,960)
sequence
gaattcttaaattcactgtaacactgtacagtttatctagtggtatgcca
gagtttcagagaatgaatgagtgggggagaggtgcatgtgtgtaataggg
attgtgcacccagtacacatgtagaagtcagttcttccaccgtgtgggtt
ctaggggttgaatgtttgtcatcagggttggtggcaagttcttttatcca
ccgagtcatctcattggcccatggttacttaatttactacaagttgtttt
ctgaccatcatttgtaaaaacaattaggatatagaatatagtttaaaagt
ataacataacctgttacgcagtttttcagcttagtagaagattcaaattt
aaatgaatattttgagtaaagattatcaaatttaaatgaatattttgaaa
ggattaaatgtcaaagtagaaatctccattttgagtattcattaacttct
tcaacagatattaaaatctgtcataattattagatacagggttgtttggc
acaacatctttctgttctgaacagtttactgtcttgtagttgccaggaag
cgctgcgaagaactttctttttcagttacctttgaatgatctcagaactg
gtccatggtttgggtttaaagtcctatcttgtttgtattttactcctagt
gtcaactacagtcctgattataagcatagttgttacttaaaaacatttta
aagaaagatgctaaatttaaagttaggacttaaacaaaaaacaaaaaacc
agctgtcatgttcttgttttcttagacttttctggtaaaacaattaaagt
tttgtttgcttttgttttctaattctggtttgtgtttgtttcaatgtcat
tttgtaatacttttccatccagatagacagaaatattggcagttttaaat
taagacaaccttaattgcgataaacacaaaatgtatctttgtacaggatt
ggagattgcacaaagaacagatcttaggtgctgtgcttctgggcagaaga
agaccaagctgtccaaagttaaaggctagtttggttaactattgagaagc
aatcagcttaacctatcttttttttataaaatgccattactgaccaagta
ctaaaa
gaattcctgggtattcaaaagaaactatggacttcagtatgtgctgttcc
cactggaggctctgttttctggtttttgttttttgttttttaaaggaagt
gagagaatgcagtacttcctccaacacacacacacacacacacacacaca
cacacactcagtctggatgatggaaatgccttggccttggcacagcaagg
cagagaacagacccacagcagaaggccatgggaggccacatggttctgcg
agtttgggacacgaattctgactctctttaccaagcgctgcccacggcaa
actgtttttctgtacttggtctcctctgcaaagatggtcaggagtgatgg
gaagttttaaaggttgtgctaggatggatgaaataggtgtgcctgggttt
gagctgtcccagaagcagatcctgagacaagggtttgagcacaagcagcg
tgccttacgaggtagtctgggaaaagctggcgtgggcagagaaggatgct
cattcctctgtatcatcaagtgaatgtctattctggaagccaaggcagaa
gatgccctcagcaccatctcatccaagagaaacatatgcaccacgtcccc
cagtcagtgcttaggggatgcctctattaaatttaaagtattaacttagt
attaaatttccagcgtatccatccagtctttcacacaggcaagggtgaga
aaaagaaaactgccaggtagaagttggatgtgaacatgctatgatggtaa
agccagagtgttggcaggtacacagttgcagactctgatacagtcaaaag
ctcaatgcccagtgtttgtgggtagatgcagactacccaggtgggactca
gagctgttgagtagtgtgcttaatgtgtataatgtaatcatgagtgtgga
tagaggtgctctggatgctttcataagatgttcacagcccatactaatgc
acagaaggttcgttaaatttctcagaaagctaaaaaaaaaaaaaacttga
attgatagaaacttctatgttacagggtgtttgtctggacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116992341_116993450
seq2: B6Ng01-011L21.b_48_1153

seq1  GAATTCTTAAATTCACTGTAACACTGTACAGTTTATCTAGTGGTATGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATTCACTGTAACACTGTACAGTTTATCTAGTGGTATGCCA  50

seq1  GAGTTTCAGAGAATGAATGAGTGGGGGAGAGGTGCATGTGTGTAATAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAGAGAATGAATGAGTGGGGGAGAGGTGCATGTGTGTAATAGGG  100

seq1  ATTGTGCACCCAGTACACATGTAGAAGTCAGTTCTTCCACCGTGTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCACCCAGTACACATGTAGAAGTCAGTTCTTCCACCGTGTGGGTT  150

seq1  CTAGGGGTTGAATGTTTGTCATCAGGGTTGGTGGCAAGTTCTTTTATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGTTGAATGTTTGTCATCAGGGTTGGTGGCAAGTTCTTTTATCCA  200

seq1  CCGAGTCATCTCATTGGCCCATGGTTACTTAATTTACTACAAGTTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCATCTCATTGGCCCATGGTTACTTAATTTACTACAAGTTGTTTT  250

seq1  CTGACCATCATTTGTAAAAACAATTAGGATATAGAATATAGTTTAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATCATTTGTAAAAACAATTAGGATATAGAATATAGTTTAAAAGT  300

seq1  ATAACATAACCTGTTACGCAGTTTTTCAGCTTAGTAGAAGATTCAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAACCTGTTACGCAGTTTTTCAGCTTAGTAGAAGATTCAAATTT  350

seq1  AAATGAATATTTTGAGTAAAGATTATCAAATTTAAATGAATATTTTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATATTTTGAGTAAAGATTATCAAATTTAAATGAATATTTTGAAA  400

seq1  GGATTAAATGTCAAAGTAGAAATCTCCATTTTGAGTATTCATTAACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAATGTCAAAGTAGAAATCTCCATTTTGAGTATTCATTAACTTCT  450

seq1  TCAACAGATATTAAAATCTGTCATAATTATTAGATACAGGGTTGTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGATATTAAAATCTGTCATAATTATTAGATACAGGGTTGTTTGGC  500

seq1  ACAACATCTTTCTGTTCTGAACAGTTTACTGTCTTGTAGTTGCCAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCTTTCTGTTCTGAACAGTTTACTGTCTTGTAGTTGCCAGGAAG  550

seq1  CGCTGCGAAGAACTTTCTTTTTCAGTTACCTTTGAATGATCTCAGAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCGAAGAACTTTCTTTTTCAGTTACCTTTGAATGATCTCAGAACTG  600

seq1  GTCCATGGTTTGGGTTTAAAGTCCTATCTTGTTTGTATTTTACTCCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGGTTTGGGTTTAAAGTCCTATCTTGTTTGTATTTTACTCCTAGT  650

seq1  GTCAACTACAGTCCTGATTATAAGCATAGTTGTTACTTAAAAACATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTACAGTCCTGATTATAAGCATAGTTGTTACTTAAAAACATTTTA  700

seq1  AAGAAAGATGCTAAATTTAAAGTTAGGACTTAAACAAAAAAC-AAAAACC  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGAAAGATGCTAAATTTAAAGTTAGGACTTAAACAAAAAACAAAAAACC  750

seq1  AGCTGTCATGTTCTTGTTTTCTTAGACTTTTCTGGTAAAACAATTAAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCATGTTCTTGTTTTCTTAGACTTTTCTGGTAAAACAATTAAAGT  800

seq1  TTTGTTTGCTTTTGTTTCTTAATTCTGGTTTGTGTTTGTTTCAATGTCA-  848
      |||||||||||||||||  |||||||||||||||||||||||||||||| 
seq2  TTTGTTTGCTTTTGTTTTCTAATTCTGGTTTGTGTTTGTTTCAATGTCAT  850

seq1  TTTGTAATACTTTTCCATCCAGATAAGACAG-AATATTGGCAGTTTT-AA  896
      |||||||||||||||||||||||| |||||| ||||||||||||||| ||
seq2  TTTGTAATACTTTTCCATCCAGAT-AGACAGAAATATTGGCAGTTTTAAA  899

seq1  TTAAGACAACCTTAATTGCGATAAACACAAAATGTACCTTGTAACAGGAT  946
      |||||||||||||||||||||||||||||||||||| |||   |||||||
seq2  TTAAGACAACCTTAATTGCGATAAACACAAAATGTATCTTTGTACAGGAT  949

seq1  T-GAGATTGCACAAAGAACAGATCTTAGGTGCTGTGCTTCTGGGCAGAAA  995
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGAGATTGCACAAAGAACAGATCTTAGGTGCTGTGCTTCTGGGCAG-AA  998

seq1  GAAGACCCAGCTGTCAGAAGTTAAAAGGCTTAGTTTGTTTAACTATTGAG  1045
      ||||||| |||||||  ||||| |||||| ||||||| ||||||||||||
seq2  GAAGACCAAGCTGTCCAAAGTT-AAAGGC-TAGTTTGGTTAACTATTGAG  1046

seq1  AAGCAATCAGCTTTAATCTTATTTTTTTTTTTAATTAGATGCCATAACTG  1095
      |||||||||||||  | | ||| ||||||||  || | ||||||| ||||
seq2  AAGCAATCAGCTT--AACCTATCTTTTTTTT--ATAAAATGCCATTACTG  1092

seq1  ACTAAATGACTAAAA  1110
      || || | |||||||
seq2  ACCAAGT-ACTAAAA  1106

seq1: chr2_117151912_117152960
seq2: B6Ng01-011L21.g_66_1107 (reverse)

seq1  TTGTCCGGGACAAACACACCTGTAACATAGGAAGTTTTCTATCAATTCAG  50
      ||||||  ||||||||| ||||||||||| |||| |||||||||||||| 
seq2  TTGTCC-AGACAAACAC-CCTGTAACATA-GAAG-TTTCTATCAATTCAA  46

seq1  GTTTTTTTTTTTTTTTTAGCTTTCTGAGAAATTTAACG-ACCTTCTGTGC  99
      |  ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  G--TTTTTTTTTTTTTTAGCTTTCTGAGAAATTTAACGAACCTTCTGTGC  94

seq1  ATTTAGTATGGGCTGTGAACATCTTATGAAAGCATCCAGAGCCACCTCTA  149
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  A-TTAGTATGGGCTGTGAACATCTTATGAAAGCATCCAGAG-CACCTCTA  142

seq1  TCCACACTCATGATTACATTATACACATTAAGCACCACTACTCAACAGCT  199
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCACACTCATGATTACATTATACACATTAAGCA-CACTACTCAACAGCT  191

seq1  CTGAGT-CCACCTGGGTAGTCTGCATCTACCCACAAACACTGGGCATTGA  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCCACCTGGGTAGTCTGCATCTACCCACAAACACTGGGCATTGA  241

seq1  GCTTTTGACTGTATCAGAGTCTGCAACTGTGTACCTGCCAACACTCTGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGACTGTATCAGAGTCTGCAACTGTGTACCTGCCAACACTCTGGC  291

seq1  TTTACCATCATAGCATGTTCACATCCAACTTCTACCTGGCAGTTTTCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATCATAGCATGTTCACATCCAACTTCTACCTGGCAGTTTTCTTT  341

seq1  TTCTCACCCTTGCCTGTGTGAAAGACTGGATGGATACGCTGGAAATTTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCCTTGCCTGTGTGAAAGACTGGATGGATACGCTGGAAATTTAA  391

seq1  TACTAAGTTAATACTTTAAATTTAATAGAGGCATCCCCTAAGCACTGACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTTAATACTTTAAATTTAATAGAGGCATCCCCTAAGCACTGACT  441

seq1  GGGGGACGTGGTGCATATGTTTCTCTTGGATGAGATGGTGCTGAGGGCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACGTGGTGCATATGTTTCTCTTGGATGAGATGGTGCTGAGGGCAT  491

seq1  CTTCTGCCTTGGCTTCCAGAATAGACATTCACTTGATGATACAGAGGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCCTTGGCTTCCAGAATAGACATTCACTTGATGATACAGAGGAAT  541

seq1  GAGCATCCTTCTCTGCCCACGCCAGCTTTTCCCAGACTACCTCGTAAGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCCTTCTCTGCCCACGCCAGCTTTTCCCAGACTACCTCGTAAGGC  591

seq1  ACGCTGCTTGTGCTCAAACCCTTGTCTCAGGATCTGCTTCTGGGACAGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCTTGTGCTCAAACCCTTGTCTCAGGATCTGCTTCTGGGACAGCT  641

seq1  CAAACCCAGGCACACCTATTTCATCCATCCTAGCACAACCTTTAAAACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCAGGCACACCTATTTCATCCATCCTAGCACAACCTTTAAAACTT  691

seq1  CCCATCACTCCTGACCATCTTTGCAGAGGAGACCAAGTACAGAAAAACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACTCCTGACCATCTTTGCAGAGGAGACCAAGTACAGAAAAACAG  741

seq1  TTTGCCGTGGGCAGCGCTTGGTAAAGAGAGTCAGAATTCGTGTCCCAAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCGTGGGCAGCGCTTGGTAAAGAGAGTCAGAATTCGTGTCCCAAAC  791

seq1  TCGCAGAACCATGTGGCCTCCCATGGCCTTCTGCTGTGGGTCTGTTCTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGAACCATGTGGCCTCCCATGGCCTTCTGCTGTGGGTCTGTTCTCT  841

seq1  GCCTTGCTGTGCCAAGGCCAAGGCATTTCCATCATCCAGACTGAGTGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTGTGCCAAGGCCAAGGCATTTCCATCATCCAGACTGAGTGTGT  891

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGAAGTACTGCATTCTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGAAGTACTGCATTCTCT  941

seq1  CACTTCCTTTAAAAAACAAAAAACAAAAACCAGAAAACAGAGCCTCCAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTTTAAAAAACAAAAAACAAAAACCAGAAAACAGAGCCTCCAGT  991

seq1  GGGAACAGCACATACTGAAGTCCATAGTTTCTTTTGAATACCCAGGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGCACATACTGAAGTCCATAGTTTCTTTTGAATACCCAGGAATT  1041

seq1  C  1049
      |
seq2  C  1042