BAC Information

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BAC

Clone NameB6Ng01-012D05
Chromosome2 (Build37)
Map Location 20,104,246 - 20,104,900
singlet/doubletsinglet
Overlap genenone
Upstream geneArmc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564, LOC100041302, LOC433406, LOC654360
Downstream geneLOC667609, Etl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012D05.bB6Ng01-012D05.g
ACCDH847356DH847357
length1,262655
definitionDH847356|Mus musculus domesticus DNA, BAC clone: B6Ng01-012D05, 5' end.DH847357|Mus musculus domesticus DNA, BAC clone: B6Ng01-012D05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgatctacttagactttagatttgtacaaggagataagaatg
gatcaatttgaattcttctacatgataaccgccagttgagccagcaccat
ttgttgaaaatgctgtctttccatttggctaggaatttcataaattcatt
ctttttaatagctgagtagtactccattgtgtagatgtaccacattttct
gtatccattcctctgttgaggggcatctggtttatttccagcttctggct
attataaataaggctgctatgaacatagtggagcatgtgtccttcttacc
agttggggcatcttctggatatatgcccaggagaggtattgctggatcct
ctggtagtactatgtccaattttctgaggaaccgccagactgatttccag
agtggttgtccaagcctgcaatcccaccaacaatggaggagtgttcctct
ttctccacatccacgccagcatctgctgtcacctgaatttttgatcttag
ccattctgactggtgtgaggtggaatctcagggttgttttgatttgcatt
tccctgatgattaaggatgttgaacattttttcaggtgcttctctgccat
tcggtattcctcaggtgagaattctttgttcagttctgagccccattttc
atcctgagtgaggtaacacattcacaaaggaactcacacaatatgtactc
actgataagtggatattagccccaaacctaggatacccaagatataagat
acaatttgctaaacacatgaaactcaagaagaatgaagactgaagtgtgg
acactatgcccctccttagaattgggaacaaaacacccatggaaggagtt
acagagacaaagtttggagctgagatgaaaggatggaccatgtagagact
gccatatccagggatccaccccataatcagcatccaaacgctgacaccat
tgcattacactaagcaagattttattgaaaggacccagatgtagcttgtc
tcttgtgagaactatgcctgggcctagcaaacacagaaagtgaatgctca
cagtcagctaatgggatgatcacaagggcttccaatggaggacctagaaa
aggatcccaggactaagggatctgcaaccttaagttgacaacatatgact
agccagtactctgagctcttgtagctctgcgccattgatcagaatgccta
gttcgaccatactgtgagaacggtgccccataatggactcttgcgacctt
ataatgctccta
gaattcttcagtcaccccacaaggccctgttgccttcaaaataaaatttt
atttcagaatttaatttcatgataacctgttcagccagtcagaggttttc
tcaaaggggagataaaaataaaatatcaaatgcctcattatgcatgcaca
tcctcaggactggtccagaacgaaactctgaagcccagtacctagctcag
tacctagctcagtacctagcccagtacctagctcctcctgacgtatgtga
gtagggatgagctggaggtcactgtgctcacgtggtactggaaagagctg
gggtcaaaatccaacgcatcgtgtctggagttgctaggtctggcgtttgg
cgtgaattgacattgatatctagatggcaaagccacttttaggtctccca
tttttcactcttcaacaggactgattattggtattccctaaagtttcttt
ctagactatattccatggaattttgggggcctcctaggcaaagaggtatc
cttaaagatttatttagtttttatttttattcagtctctctctctctctc
tctctctctctctgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtatgtg
tgtgtgtgtgtgtatgtgaatcatgtgtgtgcaccatgtgtgtgaaggtg
ccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_20104246_20104900
seq2: B6Ng01-012D05.g_66_720 (reverse)

seq1  TGTGGCACCTTCACACACATGGTGCACACACATGATTCACATACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACCTTCACACACATGGTGCACACACATGATTCACATACACACAC  50

seq1  ACACACACATACACACACACACACACACATACACACACACACAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATACACACACACACACACACATACACACACACACAGAGAGAG  100

seq1  AGAGAGAGAGAGAGAGAGAGACTGAATAAAAATAAAAACTAAATAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGACTGAATAAAAATAAAAACTAAATAAATCT  150

seq1  TTAAGGATACCTCTTTGCCTAGGAGGCCCCCAAAATTCCATGGAATATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATACCTCTTTGCCTAGGAGGCCCCCAAAATTCCATGGAATATAG  200

seq1  TCTAGAAAGAAACTTTAGGGAATACCAATAATCAGTCCTGTTGAAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAGAAACTTTAGGGAATACCAATAATCAGTCCTGTTGAAGAGTG  250

seq1  AAAAATGGGAGACCTAAAAGTGGCTTTGCCATCTAGATATCAATGTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGGAGACCTAAAAGTGGCTTTGCCATCTAGATATCAATGTCAAT  300

seq1  TCACGCCAAACGCCAGACCTAGCAACTCCAGACACGATGCGTTGGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCCAAACGCCAGACCTAGCAACTCCAGACACGATGCGTTGGATTTT  350

seq1  GACCCCAGCTCTTTCCAGTACCACGTGAGCACAGTGACCTCCAGCTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAGCTCTTTCCAGTACCACGTGAGCACAGTGACCTCCAGCTCATC  400

seq1  CCTACTCACATACGTCAGGAGGAGCTAGGTACTGGGCTAGGTACTGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCACATACGTCAGGAGGAGCTAGGTACTGGGCTAGGTACTGAGCT  450

seq1  AGGTACTGAGCTAGGTACTGGGCTTCAGAGTTTCGTTCTGGACCAGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGAGCTAGGTACTGGGCTTCAGAGTTTCGTTCTGGACCAGTCCT  500

seq1  GAGGATGTGCATGCATAATGAGGCATTTGATATTTTATTTTTATCTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTGCATGCATAATGAGGCATTTGATATTTTATTTTTATCTCCCC  550

seq1  TTTGAGAAAACCTCTGACTGGCTGAACAGGTTATCATGAAATTAAATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAAACCTCTGACTGGCTGAACAGGTTATCATGAAATTAAATTCT  600

seq1  GAAATAAAATTTTATTTTGAAGGCAACAGGGCCTTGTGGGGTGACTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAATTTTATTTTGAAGGCAACAGGGCCTTGTGGGGTGACTGAAG  650

seq1  AATTC  655
      |||||
seq2  AATTC  655