BAC Information

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BAC

Clone NameB6Ng01-012F11
Chromosome2 (Build37)
Map Location 57,170,791 - 57,171,639
singlet/doubletsinglet
Overlap geneGpd2
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910
Downstream geneLOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012F11.g
ACCDH847462
length853
definitionDH847462|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattccagaaccctcatggcaggagtcttcactgattcctgatt
cctgcaaactgccctctcgtcctccttatgccaccatggcatacgtgcat
acacaatacataaatgctttgctttgttctattttacaaaaattggagca
tacagagatgctatggtaagctccaaacaacttgccacaaaagaaaacac
agacatcacatcagatcagcaataataggaagtgctcaggagccacctca
aggaagtgactgtttgagcatcagtatttctgatggatagacgcatcaaa
tatacacgcgtaatgagcacattaaagatgatggaaaactatgtttccac
tactttctgaaaactcaaaaataacaggaaaggagcaaagtatgcctata
tgcaaggtttctaaaggaagcaaatggttaaaacaggaaagttataatta
actgagttaataaattaggaaaaaaacagaattagaaaagaactaattta
aaatccgtcaggctctaatggaatattccaattagctatgcaatggcaac
tgcagaaggggatgggatccaaaagctggggttgcatgatacccacatcc
ccttctagaatattcctgacccaacagttgggtgtgcctccttaaaactt
tgccagcagggccactcctactctgtccgataaatactgccacctacttt
cttgctccctaatcaccctgaccctttaatctgggctgcctctgggggct
caattcaaatagcatgggtgtgaaagggatctgtgtgacttccaagtgat
agctaagagaagccttgcttcctgttttgtgtcttttttgtgttctatga
ggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57170791_57171639
seq2: B6Ng01-012F11.g_66_918 (reverse)

seq1  ACCTCAAAGAACACATAAGCGAC-CAAAACAGGAAAGCAAGGCTTCTCTT  49
      |||||| |||||||| ||  ||| ||||||||| ||||||||||||||||
seq2  ACCTCATAGAACACAAAAAAGACACAAAACAGG-AAGCAAGGCTTCTCTT  49

seq1  GGCTATCACTTTGGAGTCACACAGTGTCCCTTTCACA-CCATGCTAATTG  98
       |||||||||| | ||||||||||  ||||||||||| |||||||| |||
seq2  AGCTATCACTTGGAAGTCACACAG-ATCCCTTTCACACCCATGCTATTTG  98

seq1  AATTGAG-CCCCAGAGGCAG-CCAGATTAAAGGGTCAGGGTGATTAGGGA  146
      ||||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  AATTGAGCCCCCAGAGGCAGCCCAGATTAAAGGGTCAGGGTGATTAGGGA  148

seq1  GCAAGAAAGTAGGTGGCAGTATTTATCGGACAGAGTGGGAGTGGCCCTGC  196
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAAGAAAGTAGGTGGCAGTATTTATCGGACAGAGTAGGAGTGGCCCTGC  198

seq1  TGGCAAAG-TTTAAGGAGGCACACCCAACTGTTGGGTCAGGAATATTCTA  245
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGTTTTAAGGAGGCACACCCAACTGTTGGGTCAGGAATATTCTA  248

seq1  GAAGGGGATGTGGGTATCCTGCAA-CCCAGCTTTTGGATCCCATCCCCTT  294
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  GAAGGGGATGTGGGTATCATGCAACCCCAGCTTTTGGATCCCATCCCCTT  298

seq1  CTGCAGTTACCATTGCATAGCTAATTGGAATATTCCATTAGAGCCTGACG  344
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTGCCATTGCATAGCTAATTGGAATATTCCATTAGAGCCTGACG  348

seq1  GATTTTAAATTAGTTCTTTTCTAATTCTGTTTTTTTCCTAATTTATTAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAATTAGTTCTTTTCTAATTCTGTTTTTTTCCTAATTTATTAAC  398

seq1  TCAGTTAATTATAACTTTCCTGTTTTAACCATTTGCTTCCTTTAGAAACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATTATAACTTTCCTGTTTTAACCATTTGCTTCCTTTAGAAACC  448

seq1  TTGCATATAGGCATACTTTGCTCCTTTCCTGTTATTTTTGAGTTTTCAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATAGGCATACTTTGCTCCTTTCCTGTTATTTTTGAGTTTTCAGA  498

seq1  AAGTAGTGGAAACATAGTTTTCCATCATCTTTAATGTGCTCATTACGCGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGGAAACATAGTTTTCCATCATCTTTAATGTGCTCATTACGCGT  548

seq1  GTATATTTGATGCGTCTATCCATCAGAAATACTGATGCTCAAACAGTCAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTGATGCGTCTATCCATCAGAAATACTGATGCTCAAACAGTCAC  598

seq1  TTCCTTGAGGTGGCTCCTGAGCACTTCCTATTATTGCTGATCTGATGTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGAGGTGGCTCCTGAGCACTTCCTATTATTGCTGATCTGATGTGA  648

seq1  TGTCTGTGTTTTCTTTTGTGGCAAGTTGTTTGGAGCTTACCATAGCATCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTTTTCTTTTGTGGCAAGTTGTTTGGAGCTTACCATAGCATCT  698

seq1  CTGTATGCTCCAATTTTTGTAAAATAGAACAAAGCAAAGCATTTATGTAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGCTCCAATTTTTGTAAAATAGAACAAAGCAAAGCATTTATGTAT  748

seq1  TGTGTATGCACGTATGCCATGGTGGCATAAGGAGGACGAGAGGGCAGTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCACGTATGCCATGGTGGCATAAGGAGGACGAGAGGGCAGTTT  798

seq1  GCAGGAATCAGGAATCAGTGAAGACTCCTGCCATGAGGGTTCTGGGATGG  844
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGGAATCAGGAATCAGTGAAGACTCCTGCCATGAGGGTTCTGGAATGG  848

seq1  AATTC  849
      |||||
seq2  AATTC  853