BAC Information

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BAC

Clone NameB6Ng01-012J12
Chromosome2 (Build37)
Map Location 73,123,926 - 73,281,057
singlet/doubletdoublet
Overlap gene1700023B02Rik, Scrn3, Gpr155, Wipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012J12.bB6Ng01-012J12.g
ACCDH847645DH847646
length848703
definitionDH847645|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J12, 5' end.DH847646|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,280,206 - 73,281,057)(73,123,926 - 73,124,628)
sequence
gaattcagcctgttttgaatttgatggcaggcaaaacctccctaggtgct
ctatcaaaggcttatgaacgatagctttataacttagccctgtcctgctg
tatataccaaatgacctaaagccagtcagctatcctcaatttcagttgtt
ttctcttagtctgttttcttttttttgtttgttttaatttttttaagatt
tatttttttatgcagatgagtacactgtcactgtcttcagacacaccaaa
agagggcatcagatcccattatagatggttgtgagccaccatgtggttgc
tgggaattgaattcaggacctctggaagagcggtcagtgctcttaacctc
tgagccatctctctagcccccattttctattactataacaaaatacctga
tacgaagtatttgatgaagaaaggaaacttatttaatatatagtttagag
gtttgagagtatgccattggaattggcctggctctgatcaggatctcatg
gggatggtgtcacaacaatgtcagaagtcaaggcataaggcagaccataa
agcaagacagaaaccctgattggggagcaaacagtcttgctgttttttga
taacccttttcagaactaactagagtcctgtgaaaccatagtagctcctt
ctgagggtagtagccaaccccttcaatggcctcattatttcccaccagtt
cctgtttcctaaaggttacacaccctctctcatggacacactgaagacca
ggtttctcacatgggagccttgaaggctatttaaaccatatagcacttcc
ctatatgacaatgggtggcgcttcaggagacatgctgataatgtgtct
gaattctttagcccacatgcactatgtttaacaaacttaaacattattat
aaatttaaacattctttcatatgtattcctcataaaacttcacaaaattt
aaaaaagaaaaaaaaccagaaaaaatattttccaagaacaagtggtatgt
aaagatatatatagatttattaagaaaaggaaaagctacaaatatatcta
ctttcaaattaaacactctgaaagctacaataacttaggagtataatctg
aggatgcaaacactaattttcttactattgaaaagacaaaacttgtttta
ctacgccgaggaatcaatcaaaccgtgcaatacacgatccaggcacccga
gctctctctctgcataagcgctgactgcagagcccagggaacccagagac
aaagccatcccacagatcccacatcccacagatcccacatcccacagatc
ccacagtctcctcagctacctgaggagcttctgcttctgcttggtggtga
gcgactttaagaactcaacttcagggtcttcttcacagtcacttgcgaca
tagtcctgagtcaacaaagacatccaagtgctagattttagatgagttag
ttagtagatagaaaagaaaacacttgtaacgtaacggagagttttctgtt
agagacataccagacatggagtggtacttggactgggaagtgtgtgtgtg
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73280206_73281057
seq2: B6Ng01-012J12.b_47_894 (reverse)

seq1  AGACACATCTATCAGCATTGTCTCCCTGGAGCGCCACCCATTGTTCATAT  50
      |||||||| |||||||| ||||| |||| |||||||||||||| ||||||
seq2  AGACACAT-TATCAGCA-TGTCT-CCTGAAGCGCCACCCATTG-TCATAT  46

seq1  AGGGAAGTGCTATATGGTTTAAATAGCCTTCAAGGCTCCCATGTGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTGCTATATGGTTTAAATAGCCTTCAAGGCTCCCATGTGAGAAA  96

seq1  CCTGGTCCTCAGTGTGTCCATGAGAGAGGGTGTGTAACCTTTAGGAAACA  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTTCAGTGTGTCCATGAGAGAGGGTGTGTAACCTTTAGGAAACA  146

seq1  GGAACTGGTGGGAAATAATGAGGCCATTGAAGGGGTTGGCTACTACCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGGTGGGAAATAATGAGGCCATTGAAGGGGTTGGCTACTACCCTC  196

seq1  AGAAGGAGCTACTATGGTTTCACAGGACTCTAGTTAGTTCTGAAAAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGCTACTATGGTTTCACAGGACTCTAGTTAGTTCTGAAAAGGGT  246

seq1  TATCAAAAAACAGCAAGACTGTTTGCTCCCCAATCAGGGTTTCTGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAAACAGCAAGACTGTTTGCTCCCCAATCAGGGTTTCTGTCTTG  296

seq1  CTTTATGGTCTGCCTTATGCCTTGACTTCTGACATTGTTGTGACACCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGGTCTGCCTTATGCCTTGACTTCTGACATTGTTGTGACACCATC  346

seq1  CCCATGAGATCCTGATCAGAGCCAGGCCAATTCCAATGGCATACTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGATCCTGATCAGAGCCAGGCCAATTCCAATGGCATACTCTCAA  396

seq1  ACCTCTAAACTATATATTAAATAAGTTTCCTTTCTTCATCAAATACTTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAAACTATATATTAAATAAGTTTCCTTTCTTCATCAAATACTTCG  446

seq1  TATCAGGTATTTTGTTATAGTAATAGAAAATGGGGGCTAGAGAGATGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGTATTTTGTTATAGTAATAGAAAATGGGGGCTAGAGAGATGGCT  496

seq1  CAGAGGTTAAGAGCACTGACCGCTCTTCCAGAGGTCCTGAATTCAATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTTAAGAGCACTGACCGCTCTTCCAGAGGTCCTGAATTCAATTCC  546

seq1  CAGCAACCACATGGTGGCTCACAACCATCTATAATGGGATCTGATGCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACATGGTGGCTCACAACCATCTATAATGGGATCTGATGCCCT  596

seq1  CTTTTGGTGTGTCTGAAGACAGTGACAGTGTACTCATCTGCATAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTGTGTCTGAAGACAGTGACAGTGTACTCATCTGCATAAAAAAA  646

seq1  TAAATCTTAAAAAAATTAAAACAAACAAAAAAAAGAAAACAGACTAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTAAAAAAATTAAAACAAACAAAAAAAAGAAAACAGACTAAGAG  696

seq1  AAAACAACTGAAATTGAGGATAGCTGACTGGCTTTAGGTCATTTGGTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACTGAAATTGAGGATAGCTGACTGGCTTTAGGTCATTTGGTATA  746

seq1  TACAGCAGGACAGGGCTAAGTTATAAAGCTATCGTTCATAAGCCTTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGGACAGGGCTAAGTTATAAAGCTATCGTTCATAAGCCTTTGAT  796

seq1  AGAGCACCTAGGGAGGTTTTGCCTGCCATCAAATTCAAAACAGGCTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACCTAGGGAGGTTTTGCCTGCCATCAAATTCAAAACAGGCTGAAT  846

seq1  TC  852
      ||
seq2  TC  848

seq1: chr2_73123926_73124628
seq2: B6Ng01-012J12.g_65_767

seq1  GAATTCTTTAGCCCACATGCACTATGTTTAACAAACTTAAACATTATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCCCACATGCACTATGTTTAACAAACTTAAACATTATTAT  50

seq1  AAATTTAAACATTCTTTCATATGTATTCCTCATAAAACTTCACAAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAACATTCTTTCATATGTATTCCTCATAAAACTTCACAAAATTT  100

seq1  AAAAAAGAAAAAAAACCAGAAAAAATATTTTCCAAGAACAAGTGGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAAAAACCAGAAAAAATATTTTCCAAGAACAAGTGGTATGT  150

seq1  AAAGATATATATAGATTTATTAAGAAAAGGAAAAGCTACAAATATATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATATATAGATTTATTAAGAAAAGGAAAAGCTACAAATATATCTA  200

seq1  CTTTCAAATTAAACACTCTGAAAGCTACAATAACTTAGGAGTATAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAATTAAACACTCTGAAAGCTACAATAACTTAGGAGTATAATCTG  250

seq1  AGGATGCAAACACTAATTTTCTTACTATTGAAAAGACAAAACTTGTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAAACACTAATTTTCTTACTATTGAAAAGACAAAACTTGTTTTA  300

seq1  CTACGCCGAGGAATCAATCAAACCGTGCAATACACGATCCAGGCACCCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCCGAGGAATCAATCAAACCGTGCAATACACGATCCAGGCACCCGA  350

seq1  GCTCTCTCTCTGCATAAGCGCTGACTGCAGAGCCCAGGGAACCCAGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTCTGCATAAGCGCTGACTGCAGAGCCCAGGGAACCCAGAGAC  400

seq1  AAAGCCATCCCACAGATCCCACATCCCACAGATCCCACATCCCACAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATCCCACAGATCCCACATCCCACAGATCCCACATCCCACAGATC  450

seq1  CCACAGTCTCCTCAGCTACCTGAGGAGCTTCTGCTTCTGCTTGGTGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTCCTCAGCTACCTGAGGAGCTTCTGCTTCTGCTTGGTGGTGA  500

seq1  GCGACTTTAAGAACTCAACTTCAGGGTCTTCTTCACAGTCACTTGCGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTTTAAGAACTCAACTTCAGGGTCTTCTTCACAGTCACTTGCGACA  550

seq1  TAGTCCTGAGTCAACAAAGACATCCAAGTGCTAGATTTTAGATGAGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGAGTCAACAAAGACATCCAAGTGCTAGATTTTAGATGAGTTAG  600

seq1  TTAGTAGATAGAAAAGAAAACACTTGTAACGTAACGGAGAGTTTTCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGATAGAAAAGAAAACACTTGTAACGTAACGGAGAGTTTTCTGTT  650

seq1  AGAGACATACCAGACATGGAGTGGTACTTGGACTGGGAAGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATACCAGACATGGAGTGGTACTTGGACTGGGAAGTGTGTGTGTG  700

seq1  TGT  703
      |||
seq2  TGT  703