BAC Information

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BAC

Clone NameB6Ng01-013G19
Chromosome2 (Build37)
Map Location 76,489,892 - 76,608,480
singlet/doubletdoublet
Overlap geneDfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6, Prkra
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013G19.bB6Ng01-013G19.g
ACCDH848241DH848242
length1,0091,109
definitionDH848241|Mus musculus domesticus DNA, BAC clone: B6Ng01-013G19, 5' end.DH848242|Mus musculus domesticus DNA, BAC clone: B6Ng01-013G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,489,892 - 76,490,916)(76,607,356 - 76,608,480)
sequence
gaattcaactccatcttgggcaaattattgagaatctgtctcaaactaaa
atcaaaatcactgggtggcagggaggtggctcagtgatagagtgcttgcc
cagcgtgcacaaggctctgggttcagtccccggtcctagaaaactaaaca
agtcgtgcctccactctatagagcaagaaaaacaactgaagagagaggca
aattagtcaagtgattttgtttctattttctgattttcattattcctacc
tcagattcacacacgtcattaagatgggccttaaataacacaaaaaggta
ccttcagtcacatgatcacatattagagcatcttagacacatgtcttttt
ttattctagaaaaattaactttgaccacagtttgatccgccaatcaagga
gcagcaggaaggcggtgctgtgcgtggtcatggagagcatccgaaccaca
cgccagtgctctctgtcagtgcacgctgggattcgtggggaagccatgcg
ggtaagatacactcagggcttcactaacgacacagttactatggagttta
aaaaaaaattactcatcaaaggcagaaaaaaaaaaaaaaaaaaagagcct
cagttttgtagggcttcagtccggagtggctgtgctttggaataagaaaa
ccaaccaaaaccacttgggttctaaccctgtgtgctacggtacaaacaat
atattactggagtctctccaattaactactacctcagtgttagagtaacc
acataaagtaagccttgatgtcgtatgctttgacatttatttatttattt
atttatttattgttttttgagaaagggtttctctgtgtagccctaggcta
tcctggaattgctctgtagaccaggctggcctcaactcagaattcgctgc
tctgctctcaagtgctgggattaaagcatgtacacacattgcccagtttt
atttcattttaagaaaatctattcatactggattttaagttgaggtttag
ctattcttt
gaattccgtgtttctgcagagaatgaaattggtattggagatccaagtcc
accatccaaaccagtctttgctagagacccaattggtacagtattaaaac
atgcattcagttttcatactctctaacttttctctgtgctattttaattt
ctttaatttttttcttttattatgtagctaaaccaagtccacctattaat
cctgaggcaatagatacaacatgtaattcagttgagctaacttggcagcc
accacgtcacgacggtggtagcaagatcctgggttatatcgtggagtacc
agaaagttggggatgaagagtggagacgagccaatcacactcctgaatca
tgccctgaaactaaatataaagtcactggcctcagggatggtcagagcta
caagttccgagtactggcagtcaacgaggctggtgaatcggacccagccc
acgttcctgaaccagttctagtaaaggaccgacttggtaagtgagatgtt
gagatttgcaattgtgaaaaaatagggtgtccactgtacatgcagtacta
taattatagtatgcattaaagaatccaacctgaaggcattctcttcattt
tagaacctcctgagcttatacttgatgctaacatggcaagagaacaacac
attagagttggtgacaccctaagacttagtgccatcatcaaaggtgtgcc
attccccaaagtaacctggaaaaaagaagacagagaggctccaacaaaag
cccaaattgatgttactccagttgggagcaagcttgaaatccgtaatgct
gcccacgaagaatggtggttttttattccttaactgtggaagaatccgcg
ggtacaaagacagtctcagtcaagtattggtcttaaggtacgcattttaa
tatttggtactactaaaaactcaatacttattttttcttttcacttatct
atcattaatactttccgataacctgggccacctagaagattggaagtcat
gaaattaggaagatcttgtacctgactggaaggaacactgacgacggtgc
ccgtggaccaattagtggtgtgaaagaagagtgtgccactgcccagtgat
cctctttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76489892_76490916
seq2: B6Ng01-013G19.b_47_1055

seq1  GAATTCAACTCCATCTTGGGCAAATTATTGAGAATCTGTCTCAAACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCATCTTGGGCAAATTATTGAGAATCTGTCTCAAACTAAA  50

seq1  ATCAAAATCACTGGGTGGCAGGGAGGTGGCTCAGTGATAGAGTGCTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATCACTGGGTGGCAGGGAGGTGGCTCAGTGATAGAGTGCTTGCC  100

seq1  CAGCGTGCACAAGGCTCTGGGTTCAGTCCCCGGTCCTAGAAAACTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGCACAAGGCTCTGGGTTCAGTCCCCGGTCCTAGAAAACTAAACA  150

seq1  AGTCGTGCCTCCACTCTATAGAGCAAGAAAAACAACTGAAGAGAGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTGCCTCCACTCTATAGAGCAAGAAAAACAACTGAAGAGAGAGGCA  200

seq1  AATTAGTCAAGTGATTTTGTTTCTATTTTCTGATTTTCATTATTCCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCAAGTGATTTTGTTTCTATTTTCTGATTTTCATTATTCCTACC  250

seq1  TCAGATTCACACACGTCATTAAGATGGGCCTTAAATAACACAAAAAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCACACACGTCATTAAGATGGGCCTTAAATAACACAAAAAGGTA  300

seq1  CCTTCAGTCACATGATCACATATTAGAGCATCTTAGACACATGTCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTCACATGATCACATATTAGAGCATCTTAGACACATGTCTTTTT  350

seq1  TTATTCTAGAAAAATTAACTTTGACCACAGTTTGATCCGCCAATCAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAGAAAAATTAACTTTGACCACAGTTTGATCCGCCAATCAAGGA  400

seq1  GCAGCAGGAAGGCGGTGCTGTGCGTGGTCATGGAGAGCATCCGAACCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGAAGGCGGTGCTGTGCGTGGTCATGGAGAGCATCCGAACCACA  450

seq1  CGCCAGTGCTCTCTGTCAGTGCACGCTGGGATTCGTGGGGAAGCCATGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGTGCTCTCTGTCAGTGCACGCTGGGATTCGTGGGGAAGCCATGCG  500

seq1  GGTAAGATACACTCAGGGCTTCACTAACGACACAGTTACTATGGAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGATACACTCAGGGCTTCACTAACGACACAGTTACTATGGAGTTTA  550

seq1  AAAAAAAATTACTCATCAAAGGCAGAAAAAAAAAAAAAAAAAAAGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTACTCATCAAAGGCAGAAAAAAAAAAAAAAAAAAAGAGCCT  600

seq1  CAGTTTTGTAGGGCTTCAGTCCGGAGTGGCTGTGCTTTGGAATAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTAGGGCTTCAGTCCGGAGTGGCTGTGCTTTGGAATAAGAAAA  650

seq1  CCAACCAAAACCACTTGGGTTCTAACCCTGTGTGCTACGGTACAAACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAACCACTTGGGTTCTAACCCTGTGTGCTACGGTACAAACAAT  700

seq1  ATATTACTGGAGTCTCTCCAATTAACTACTACCTCAGTGTTAGAGTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTGGAGTCTCTCCAATTAACTACTACCTCAGTGTTAGAGTAACC  750

seq1  ACATAAAGTAAGCCTTGATGTCGTATGCTTTGACATTTATTTATTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGTAAGCCTTGATGTCGTATGCTTTGACATTTATTTATTTATTT  800

seq1  ATTTATTTATTGTTTTTTGAGAAAGGGTTTCTCTGTGTAGCCCTAGGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTGTTTTTTGAGAAAGGGTTTCTCTGTGTAGCCCTAGGCTA  850

seq1  TCCTGGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCGC  900
      |||||||| ||||||||||||||||||||||||| ||||||| |||||| 
seq2  TCCTGGAA-TTGCTCTGTAGACCAGGCTGGCCTC-AACTCAG-AATTCG-  896

seq1  CTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGCATGTACACCACATTGC  950
      ||| ||||| ||||||||||||||||||||| ||||||||| ||||||| 
seq2  CTG-CTCTG-CTCTCAAGTGCTGGGATTAAA-GCATGTACA-CACATTG-  941

seq1  CCCAGTTTTTATTTCATTTTTAAGAAAATCTATTCATACTGAATTTTTAA  1000
      ||||| |||||||||| |||||||||||||||||||||||| |||||   
seq2  CCCAG-TTTTATTTCA-TTTTAAGAAAATCTATTCATACTGGATTTT---  986

seq1  AAGTTGAGGTTTTAGCTAATTCTTT  1025
      ||||||||| ||||||| |||||||
seq2  AAGTTGAGG-TTTAGCT-ATTCTTT  1009

seq1: chr2_76607356_76608480
seq2: B6Ng01-013G19.g_63_1171 (reverse)

seq1  GGAAAGAGGGGACCACTGGGCAGTGGCAACATCTTTCCTCTCA-ACCACA  49
      |||||||  ||| |||||||||||||||   ||||  || ||| ||||| 
seq2  GGAAAGA--GGATCACTGGGCAGTGGCACACTCTT--CTTTCACACCAC-  45

seq1  TAATTGGTTACAACAGAACCACCGTCGTCCAGTGGTTCCTTCCAAGTCAG  99
      ||||||||  | || |   ||||||||| |||| ||||||||| ||||||
seq2  TAATTGGT--CCACGG--GCACCGTCGT-CAGT-GTTCCTTCC-AGTCAG  88

seq1  GTAACAAGAATCTTTCCTAATTTCACTGACTTCCAGATC-TCTAGGTGGC  148
      || ||||| ||| |||||||||||| ||||||||| ||| ||||||||||
seq2  GT-ACAAG-ATC-TTCCTAATTTCA-TGACTTCCA-ATCTTCTAGGTGGC  133

seq1  CCAGGTTTATCTGAAAAGTATTAAATGATAGATAAGTGAAAAGAAAAAAT  198
      ||||| ||||| | |||||||| |||||||||||||||||||||||||||
seq2  CCAGG-TTATC-GGAAAGTATT-AATGATAGATAAGTGAAAAGAAAAAAT  180

seq1  ATGTATTTGAGTTTTTTAGTAGTA-CAAATATTAAAATGCGTACC-TAAG  246
      | ||| ||||| |||||||||||| |||||||||||||||||||| ||||
seq2  AAGTA-TTGAG-TTTTTAGTAGTACCAAATATTAAAATGCGTACCTTAAG  228

seq1  ACCAATACTTTGACTGAGACTGTCTTTGTACCCGCCGGATTC-TCCACAG  295
      |||||||| ||||||||||||||||||||||||| ||||||| |||||||
seq2  ACCAATAC-TTGACTGAGACTGTCTTTGTACCCG-CGGATTCTTCCACAG  276

seq1  TTAGGGAAT-AAATACCACCA-TCTTCGTGGGCAGCATTACGGATTTCAA  343
      ||| ||||| ||| ||||||| ||||||||||||||||||||||||||||
seq2  TTAAGGAATAAAAAACCACCATTCTTCGTGGGCAGCATTACGGATTTCAA  326

seq1  GCTTGCTCCCAACTGGAGTAACATCAATTTGGGCTTTTGTTGGAGCCTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCCCAACTGGAGTAACATCAATTTGGGCTTTTGTTGGAGCCTCT  376

seq1  CTGTCTTCTTTTTTCCAGGTTACTTTGGGGAATGGCACACCTTTGATGAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTTTTTTCCAGGTTACTTTGGGGAATGGCACACCTTTGATGAT  426

seq1  GGCACTAAGTCTTAGGGTGTCACCAACTCTAATGTGTTGTTCTCTTGCCA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAAGTCTTAGGGTGTCACCAACTCTAATGTGTTGTTCTCTTGCCA  476

seq1  TGTTAGCATCAAGTATAAGCTCAGGAGGTTCTAAAATGAAGAGAATGCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCATCAAGTATAAGCTCAGGAGGTTCTAAAATGAAGAGAATGCCT  526

seq1  TCAGGTTGGATTCTTTAATGCATACTATAATTATAGTACTGCATGTACAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTGGATTCTTTAATGCATACTATAATTATAGTACTGCATGTACAG  576

seq1  TGGACA-CCTATTTTTTCACAATTGCAAATCTCAACATCTCACTTACCAA  642
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCCTATTTTTTCACAATTGCAAATCTCAACATCTCACTTACCAA  626

seq1  GTCGGTCCTTTACTAGAACTGGTTCAGGAACGTGGGCTGGGTCCGATTCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTCCTTTACTAGAACTGGTTCAGGAACGTGGGCTGGGTCCGATTCA  676

seq1  CCAGCCTCGTTGACTGCCAGTACTCGGAACTTGTAGCTCTGACCATCCCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCGTTGACTGCCAGTACTCGGAACTTGTAGCTCTGACCATCCCT  726

seq1  GAGGCCAGTGACTTTATATTTAGTTTCAGGGCATGATTCAGGAGTGTGAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGTGACTTTATATTTAGTTTCAGGGCATGATTCAGGAGTGTGAT  776

seq1  TGGCTCGTCTCCACTCTTCATCCCCAACTTTCTGGTACTCCACGATATAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGTCTCCACTCTTCATCCCCAACTTTCTGGTACTCCACGATATAA  826

seq1  CCCAGGATCTTGCTACCACCGTCGTGACGTGGTGGCTGCCAAGTTAGCTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATCTTGCTACCACCGTCGTGACGTGGTGGCTGCCAAGTTAGCTC  876

seq1  AACTGAATTACATGTTGTATCTATTGCCTCAGGATTAATAGGTGGACTTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATTACATGTTGTATCTATTGCCTCAGGATTAATAGGTGGACTTG  926

seq1  GTTTAGCTACATAATAAAAGAAAAAAATTAAAGAAATTAAAATAGCACAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCTACATAATAAAAGAAAAAAATTAAAGAAATTAAAATAGCACAG  976

seq1  AGAAAAGTTAGAGAGTATGAAAACTGAATGCATGTTTTAATACTGTACCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTTAGAGAGTATGAAAACTGAATGCATGTTTTAATACTGTACCA  1026

seq1  ATTGGGTCTCTAGCAAAGACTGGTTTGGATGGTGGACTTGGATCTCCAAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTCTCTAGCAAAGACTGGTTTGGATGGTGGACTTGGATCTCCAAT  1076

seq1  ACCAATTTCATTCTCTGCAGAAACACGGAATTC  1125
      |||||||||||||||||||||||||||||||||
seq2  ACCAATTTCATTCTCTGCAGAAACACGGAATTC  1109