BAC Information

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BAC

Clone NameB6Ng01-013L10
Chromosome2 (Build37)
Map Location 160,314,622 - 160,484,384
singlet/doubletdoublet
Overlap geneLOC100043892, Top1
Upstream geneLOC100043689, Gm826, Mafb
Downstream genePlcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693, LOC100043694, LOC383769, LOC629655, LOC383770, Ptprt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013L10.bB6Ng01-013L10.g
ACCDH848461DH848462
length888247
definitionDH848461|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L10, 5' end.DH848462|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,483,497 - 160,484,384)(160,314,622 - 160,314,868)
sequence
gaattcactctgagccgggtgtggtggcgcacacctttaatcccagcact
cgggaggcagagtcaggaggatctctgagttccaggccagcctggtctac
agagtgagttccaggacaaccagggctataaagaaaaaccctgtctcgaa
aagccaaaaaaaaaaaaaagaattcactctgaagcaaatcctgggctggg
gatgtgggtcaggagccgagtacttgtatagcaaatgtgggtaaagccct
ggagattcaatcctcagtactataaaataaacaaataatccaggagtggt
ggtacaagcctttaaaaaccgcaaaggcaggcaatgctattatttcgcct
ggagtgagttccacgacagagctacatagcaagaacctgtctttaaaaaa
aggagagagccgggcgtggtggcgcacgcctttaatcccagcacttggga
ggcagaggcagtcggatttctgagttcgaggccagcctggtctacaaagt
gagttccgggacagccagagctacacagagaaaccctgtctcaaaaaaaa
aaaaaaaaaccaaaaaaaaaaaaaaaaaaaaggagagatagggctgaagc
tgaagagatgactcagcaaagtgctggctgctcttttcagggaaccacag
ccaccaccactccccaaccccacacccaccccagttcaatttctagcacc
cacacggcagctcacccctgtctgcaacaccagttcagggacacacaaac
ataaatgctgataaaacattaaaaaggcattatcatcgacttaagatcca
tcacaaacagatcacagtctgatgaaatattaactactcccatgatgtct
ggggggtgtcattcaagcaccccttcccctcattctgt
ttagcatgtcttggttattaattagcttagggagtaggcagtcctatgcc
tttagtttctgatactttttatatccgtgcatggagaggggcatggggta
cagagagaatggaaaccccttatgtggagaggattcatggggtaacatgt
atgaatgtgcccagcaggaaacatgttctccataaatagctgcctttgtt
tttccccacagtcatcagggaaatgaagcagggaggggtgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_160483497_160484384
seq2: B6Ng01-013L10.b_45_932 (reverse)

seq1  ACAGAATGAGGTGAAGGGGTGCCTGAGTGACACCCCCAGGACATCATGGG  50
      ||||||||||| |||||||||| ||| ||||||||||  |||||||||||
seq2  ACAGAATGAGGGGAAGGGGTGCTTGAATGACACCCCCCAGACATCATGGG  50

seq1  AGTAGTTAAATATCCATCAGACTGTGGTTCTGTTTGTGATGGATCTTAAG  100
      |||||||||   | ||||||||||| | ||||||||||||||||||||||
seq2  AGTAGTTAATATTTCATCAGACTGT-GATCTGTTTGTGATGGATCTTAAG  99

seq1  TCGATTGATAATGGCTTTTTAATGTTTTATCAGCATTTATGTCTGTGTGT  150
      |||| |||||||| |||||||||||||||||||||||||||| |||||||
seq2  TCGA-TGATAATGCCTTTTTAATGTTTTATCAGCATTTATGTTTGTGTGT  148

seq1  CCCTGAACTGGTGTTACAGACAGGTGTGAGCTGCCGTGTGGGTGCTAGAA  200
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  CCCTGAACTGGTGTTGCAGACAGGGGTGAGCTGCCGTGTGGGTGCTAGAA  198

seq1  ATTGAACTGGGGTGGGTGT-GGGTTGGGGAGTGGTGGTGGCTGTGGTTCC  249
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTGAACTGGGGTGGGTGTGGGGTTGGGGAGTGGTGGTGGCTGTGGTTCC  248

seq1  CTG-AAAGAGCAGCCAGCACTCTGCTGAGTCATCTCTTCAGCTTCAGCCC  298
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGAAAAGAGCAGCCAGCACTTTGCTGAGTCATCTCTTCAGCTTCAGCCC  298

seq1  TATCTCTCCTTTTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCTTTTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTGA  348

seq1  GACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCCGGAACTCACTTTGTAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCCGGAACTCACTTTGTAGA  398

seq1  CCAGGCTGGCCTCGAACTCAGAAATCCGACTGCCTCTGCCTCCCAAGTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTCGAACTCAGAAATCCGACTGCCTCTGCCTCCCAAGTGC  448

seq1  TGGGATTAAAGGCGTGCGCCACCACGCCCGGCTCTCTCCTTTTTTTAAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAAAGGCGTGCGCCACCACGCCCGGCTCTCTCCTTTTTTTAAAG  498

seq1  ACAGGTTCTTGCTATGTAGCTCTGTCGTGGAACTCACTCCAGGCGAAATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTCTTGCTATGTAGCTCTGTCGTGGAACTCACTCCAGGCGAAATA  548

seq1  ATAGCATTGCCTGCCTTTGCGGTTTTTAAAGGCTTGTACCACCACTCCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTGCCTGCCTTTGCGGTTTTTAAAGGCTTGTACCACCACTCCTG  598

seq1  GATTATTTGTTTATTTTATAGTACTGAGGATTGAATCTCCAGGGCTTTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTGTTTATTTTATAGTACTGAGGATTGAATCTCCAGGGCTTTAC  648

seq1  CCACATTTGCTATACAAGTACTCGGCTCCTGACCCACATCCCCAGCCCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGCTATACAAGTACTCGGCTCCTGACCCACATCCCCAGCCCAG  698

seq1  GATTTGCTTCAGAGTGAATTCTTTTTTTTTTTTTTGGCTTTTCGAGACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCTTCAGAGTGAATTCTTTTTTTTTTTTTTGGCTTTTCGAGACAG  748

seq1  GGTTTTTCTTTATAGCCCTGGTTGTCCTGGAACTCACTCTGTAGACCAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTCTTTATAGCCCTGGTTGTCCTGGAACTCACTCTGTAGACCAGG  798

seq1  CTGGCCTGGAACTCAGAGATCCTCCTGACTCTGCCTCCCGAGTGCTGGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGGAACTCAGAGATCCTCCTGACTCTGCCTCCCGAGTGCTGGGA  848

seq1  TTAAAGGTGTGCGCCACCACACCCGGCTCAGAGTGAATTC  888
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTGTGCGCCACCACACCCGGCTCAGAGTGAATTC  888

seq1: chr2_160314622_160314868
seq2: B6Ng01-013L10.g_73_319

seq1  TTAGCATGTCTTGGTTATTAATTAGCTTAGGGAGTAGGCAGTCCTATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATGTCTTGGTTATTAATTAGCTTAGGGAGTAGGCAGTCCTATGCC  50

seq1  TTTAGTTTCTGATACTTTTTATATCCGTGCATGGAGAGGGGCATGGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCTGATACTTTTTATATCCGTGCATGGAGAGGGGCATGGGGTA  100

seq1  CAGAGAGAATGGAAACCCCTTATGTGGAGAGGATTCATGGGGTAACATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAATGGAAACCCCTTATGTGGAGAGGATTCATGGGGTAACATGT  150

seq1  ATGAATGTGCCCAGCAGGAAACATGTTCTCCATAAATAGCTGCCTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTGCCCAGCAGGAAACATGTTCTCCATAAATAGCTGCCTTTGTT  200

seq1  TTTCCCCACAGTCATCAGGGAAATGAAGCAGGGAGGGGTGGGGGGGG  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCACAGTCATCAGGGAAATGAAGCAGGGAGGGGTGGGGGGGG  247