BAC Information

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BAC

Clone NameB6Ng01-014A24
Chromosome2 (Build37)
Map Location 100,609,906 - 100,610,459
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668702, LOC100042907, LOC241572, LOC668705
Downstream geneB230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014A24.bB6Ng01-014A24.g
ACCDH848714DH848715
length9371,217
definitionDH848714|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A24, 5' end.DH848715|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatttaacgaaatgatcatgtggtttttgtcttt
gagtttgattatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactatttataactgtttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcgggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaagaaccaactcctcatttggttaattctttgaa
tagttcttcttgtttccacttgggttgatttcacccctgagttgattatt
tcctgcccgtctactctctgggtgatttgcttccttttttctagagcttt
tagatgtgttgtcagctgctagtatgtgctctctccc
gaattcaagaaggtggactccagaaaatcaaataacccattaaaaaaatg
gggctcagagctaaacaaagaattctcccttgaggaataccgaatggctg
agaagcacctgaaaaaatgttcagcatccttaatcatcagggaaatgcaa
atcaaaacaaccctgagattccacctcacaccagtcagaatggctaagat
caaaatttcaggttacagcagatgctggcgaggatgtggagaaagaggaa
cactcctccactgcttgtgggattgcaagcttgtacaactactctggaag
tcagtctggaggttcctcagaaaattggacataatacttctggaagatcc
agcaatacctctcctgggcatgtacccagaagaagttccaactggtaata
agaacacatgctccactatgttcatagcagccttatatataatagccaga
agctggaaagaacccagatgcccctcaacagaggaacggatacagaaaat
gtggtacattaatggagtactactcagctattaaaaagaatgaatttatg
aaattcctaggcaaatggatggacctggagggcattatcctgagagaaat
aacccaatcacaaaggaactcacacaatatgtactcactgataagtggat
attagcctagaaacttagaatacctaagatataagatacaatttggtaaa
cacatgaaactcaagaagaacgaagaccaaagtgtggacactttgcccct
ttcttagatttgggaacaaaacacccatggaagatgttacagagacacac
tttgggagctgagacgaaaggatggaccatctagagactgccatatccgg
ggatccatcccattaatcagcctccaacttctgacaccattgcataacac
tggcaagattttgctgaaaggaccctgatatagctctctcttgtgagact
atgccggggcctagcaaccacagagtggatgctcacagtcagctattgga
tgatcacaggtcttcatggagatctagagaaggtacaggaagctaaagga
tctgcaaccttataggtgaacaccaatttgaacctaaccagtacctcgga
gctcttgaaccttagctgcattgtatcaaaatgttgcctattcgcaatca
ctggagagaagccatcgagataacttgtctcaatacttgtatgcgatcgc
tccgcgatacgacgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100609906_100610459
seq2: B6Ng01-014A24.b_30_583 (reverse)

seq1  ACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCC  50

seq1  CTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCA  100
      |||||||||||||| ||||||| |||||||||||| ||||||||||||||
seq2  CTAAAGAAATAGAAACAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCCA  100

seq1  GGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCT  150

seq1  AATTCCAGTTCTGCACAAACTATTTCACAAGATAGAAGTAGAAGGTACTC  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTACTC  200

seq1  TACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAG  250

seq1  AAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATAT  300

seq1  CGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCAAAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACA  350

seq1  TTAAAGAAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAG  400
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAG  400

seq1  GGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAA  450
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAATCAA  450

seq1  ACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCAT  500
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  ACTCAAAGACAAAAACCACATGATCATTTCGTTAAATGCAGAAAAAGCAT  500

seq1  TTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGA  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGACAAGATCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554