BAC Information

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BAC

Clone NameB6Ng01-014E05
Chromosome2 (Build37)
Map Location 59,952,548 - 59,953,004
singlet/doubletsinglet
Overlap geneBaz2b
Upstream genePkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, LOC667103
Downstream geneLOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014E05.bB6Ng01-014E05.g
ACCDH848857DH848858
length451870
definitionDH848857|Mus musculus domesticus DNA, BAC clone: B6Ng01-014E05, 5' end.DH848858|Mus musculus domesticus DNA, BAC clone: B6Ng01-014E05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaggccagcctgacctgcagagcaagttccagaacagccaggggtacaca
ggggaacctgcctttaaaaataaatgaacaaacaaacaaacaaataaggc
atggcagtagaagggggaaaatcagtgggaagggtggatgaaggagagca
agggtaacacagaaggccagatagcaaggtgtatcatagaactgtgagaa
gctatcaggaaatgtgcatgctttatagaattaacattaataaaaactat
gtgaaaacaagcttgttaatcctgatatacatctttctcacaggtatact
tcacagctgtcagttacacacatgtctgaaatgggcatttcctcagtaga
gtcactaagggtattgggataaaatctgagtatccaacatcatgactgca
gtagcctttttagtgtggtttttgttttgtttgttttggtgggtgagaga
t
gaattccaacgtcatggcatcatctgggctccaacaggcttgggtagcac
tgtctctccagcccacagcgcaaatgaccattcccttggaccagctgcag
tcaatgtcttcagcttttgttggtagatgtcctgtgtttctggcatctcc
cgtatgctaagctctctagtgcgtcctaggtttcaccttcaccaagctcc
aagcaaggagtctgagcctgtcacacattgcctggctctggcagcttcct
ggaaccgtggctcagtctcccatgatgtttgccctcgtgcttgcatcttg
tgtgtctacagaaacagcactacatagacaatggcgcattctactgccag
atgataacctggccctcttgcaccacagtctcaacttctagcctccctcc
ctcccacttttcattaccaaacatttttcacacgggcttcacttcccgct
cactctcactggaaatctgggcaagagcaatcagcggtacagccatgctc
aaacaaaccagcctggtatggtttaatttccccctgattcaggttttcag
gacaaaggcaaactgctgtcagtttctttgccagactttctttgcaagac
tggtccctgaaacgtttatgatcacagccttcctggctgtatttcctttg
tctttcttcctcactcccacagggctcaccccttaagctcaacttacagc
cttctagcccccagctccaaatccttccttctaaaaaaaaaacctatgga
atatggtcaggttcctcccagcagtaacagtgaccctaattctcttgatc
agttcggtgagctactttcctacacagtccagatactgatcagaacacct
gaggggtgaggggtggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59952548_59953004
seq2: B6Ng01-014E05.b_48_504

seq1  GAATTCAAGGCCAGCCTGACCTGCAGAGCAAGTTCCAGAACAGCCAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCTGACCTGCAGAGCAAGTTCCAGAACAGCCAGGGG  50

seq1  TACACAGGGGAACCTGCCTTTAAAAATAAATGAACAAACAAACAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGGGAACCTGCCTTTAAAAATAAATGAACAAACAAACAAACAAA  100

seq1  TAAGGCATGGCAGTAGAAGGGGGAAAATCAGTGGGAAGGGTGGATGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATGGCAGTAGAAGGGGGAAAATCAGTGGGAAGGGTGGATGAAGG  150

seq1  AGAGCAAGGGTAACACAGAAGGCCAGATAGCAAGGTGTATCATAGAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGGGTAACACAGAAGGCCAGATAGCAAGGTGTATCATAGAACTG  200

seq1  TGAGAAGCTATCAGGAAATGTGCATGCTTTATAGAATTAACATTAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCTATCAGGAAATGTGCATGCTTTATAGAATTAACATTAATAAA  250

seq1  AACTATGTGAAAACAAGCTTGTTAATCCTGATATACATCTTTCTCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTGAAAACAAGCTTGTTAATCCTGATATACATCTTTCTCACAGG  300

seq1  TATACTTCACAGCTGTCAGTTACACACATGTCTGAAATGGGCATTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCACAGCTGTCAGTTACACACATGTCTGAAATGGGCATTTCCTC  350

seq1  AGTAGAGTCACTAAGGGTATTGGGATAAAATCTGAGTATCCAACATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTCACTAAGGGTATTGGGATAAAATCTGAGTATCCAACATCATG  400

seq1  ACTGCAGTAGCCTTTTTAGTGTGGTTTTTGTTTTGTTTGTTTTGGTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTAGCCTTTTTAGTGTGGTTTTTGTTTTGTTTGTTTTGGTGGGT  450

seq1  GAGAGAT  457
      |||||||
seq2  GAGAGAT  457