BAC Information

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BAC

Clone NameB6Ng01-015B13
Chromosome2 (Build37)
Map Location 142,776,228 - 142,776,940
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B13.b
ACCDH849449
length996
definitionDH849449|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B13, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttatagactatgaagaacatcccagacaccgatgagaggccc
tctcagctgcctatcgacatggatgctggtttcatggaaggtagggagca
cccaaaagtctatttccaggctctaatgggtggtctctgtggggctggga
agtgctccaccaatctgacctaggtaataggaagttacagaaattagaag
gattgcgggaaagtcattaagacagttgtgtacgttgataacaaagtaca
gaggaggaggaaggaaggaacgaaggaaggaatgaaggaaggaaggaagg
actttctcctctataagtttcagtgtctctggttttatgtgaagttcctt
gatccacttagatttgaccttagtacaaggagataagtatggatcgattc
gcattcttctacacgataacaaccagttgtgccagcaccaattgttgaaa
atgctgtctttcttccactggatggttttagctcccttgttgaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtctctataccagtaccatgcagtttttatcacaatt
gccctgtagtaaagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaggtttttgttattccagat
gaattttgcaaattgctctttctaattcgtgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgtcgatcctgccaatccatgagcatggtagatctttcatctt
ctgagatctctttaatttcttcctcagggactggagttttatcatcagat
cttcacttcctcgttagagtcacgctagttattttatattattggtgcta
tgagagtgttggtttcctaatttctttccagccgtttattctttgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776228_142776940
seq2: B6Ng01-015B13.b_344_1039 (reverse)

seq1  ACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTC  50
      ||||||||||||| ||||| ||||||||||||| || ||||||   ||||
seq2  ACAAAGAATAAAC-GGCTG-GAAAGAAATTAGGAAACCAACAC---TCTC  45

seq1  AATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAG  100
       |||| ||| |||||||||||||| ||  |||||||||||||  ||||||
seq2  -ATAG-CACCAATAATATAAAATAACT-AGCGTGACTCTAAC-GAGGAAG  91

seq1  TGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAA  150
      || |||||||| |||||||||   || |||| ||| || |||||||||||
seq2  TG-AAGATCTG-ATGATAAAA--CTCCAGTCCCTG-AGGAAGAAATTAAA  136

seq1  GAAGATCTCAGAAGATGGAAGGATCTCCCATGCTCATGGATTGGCAGGAT  200
      | |||||||||||||| ||| ||||| |||||||||||||||||||||||
seq2  G-AGATCTCAGAAGAT-GAAAGATCTACCATGCTCATGGATTGGCAGGAT  184

seq1  CAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATG  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATG  234

seq1  CAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCA  300
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CAATCCCCATCAAAATTCCAACTCAATTCTTC-ACGAATTAGAAAGAGCA  283

seq1  ATTTGC-AAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTC  349
      |||||| |||||||||||||||||| ||||||||||||||||||||| ||
seq2  ATTTGCAAAATTCATCTGGAATAAC-AAAAACCTAGGATAGCAAAAACTC  332

seq1  TTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAG  382

seq1  CTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGA  449
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTACAGGGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGA  432

seq1  CAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCAC  482

seq1  ACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGG  549
      ||||||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  ACACCTATGGTCACTTGATCTTCAACAAGGGAGCTAAAACCATCCAGTGG  532

seq1  AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATC  582

seq1  ATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCA  649
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCA  632

seq1  AATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTT  682

seq1  ATAGAGGAGAAAGT  713
      ||||||||||||||
seq2  ATAGAGGAGAAAGT  696