BAC Information

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BAC

Clone NameB6Ng01-015D21
Chromosome2 (Build37)
Map Location 8,131,843 - 8,231,671
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040648, LOC672230
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015D21.bB6Ng01-015D21.g
ACCDH849555DH849556
length1,0921,133
definitionDH849555|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D21, 5' end.DH849556|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,230,576 - 8,231,671)(8,131,843 - 8,132,985)
sequence
gaattcattattcaatgtgtcttcagttctcccagcaacattatctgtaa
ttacaattagaaagaatggctcacattatgaaaatccagtctctggcaaa
tgggcctcttgtatgatccaacctggtccattctgaggaaggatctgtgc
cagagcaggaagggatggttcgctctccatcagtgctttgttctcttgtc
tgttatgtaatggagaacgctgtgcctaattacaaattcatcaataaaac
tcaagaatgagtatgaatataacattttttgttggataatactatcctag
gtttgtgaagactttgattcttttaaaaatacactcatataattctttgg
cttcagatttattcctgccccatctttttgtattaggagtcaaaattttt
ccactcccagctgttatcaacaagcagacaattctttattccttaaagtg
cttatagaattaaaataagtcaacagaccatataatccaacaaaggcata
gaccccaggaagtttcttattatccattttcagtatgaatgagtttacac
acacacacacacacacacacacacacacacacacacaaaacacacacata
tgcatgcacttgcacaaacaggcactcatgtgtgctcacacacatatata
catctagaataaatgggacacacacactctctctcactaatatacataca
gcacacatgcactcaaatatacacatgtatgcacacacaaccacaaatat
actcatacacatacacacaccaatcttgaagctatttaactgaaatcaga
acttaacatgccaccattgtcatttctcaagtcaaatttttgctattgat
gtctacttttttgattttttaaaaaaaatgtttttagatattttctttat
ttacatttcaaaatgtcattccctttcctagttccccctccaaaaatccc
ctatcttctaccaaatccccctgcttaactcacccacccgttcctgctcc
tgggcctggcatttccctatactggcatagaaccttcaaaggaccaaggc
cctccctcctttggatgactgactaggcatctctgctacata

gaattccagataacccatttaactctgtcagtttaatcccctgataattc
cattctctaacatcactacactgtgaatttgataattttcccagtcaggt
aagcttatatttttgcattttttattgttttgtaggtgaaatcttgtatg
actctctggaccacctggcccttaccgtgtatcccacggtctccaggaac
ttatgataaccctcctacctctgcatcatggagtgctgagaatactgcta
aaacactaattttattatgtatcctataatttaaatattgccaaacactc
cttatctctctgacaaactaatacaccttaatttgccatgtatagataga
tgattcaaacttctatagctcgggctggctttagagtacagctctgggta
acctgacatttctatttttttgtcctttttttttggcattttctttatta
ggtattttcttcatttacatttccaatgctatcccaaaagtcttccacat
cctccccctccccccactcccctacccacctcttggccctggcgttcccc
tgtactgaggctaataaggctccactagtagataatgtctctgattcctt
atactctctttatcaagcccctagttgctgattataatgtaatttcgaca
caacttgacctctgcaacaccaactgctgacatttcactgaaagtatctg
tgtcatatgtctctcatcctttcatggagcttttcactactaaagagtag
cctggctaatttctatactcgcagcactttgcagttgttccatatacatt
tgcagaactaaactgaatgatgcataatcagctgagctccatgggaagga
aaacctaaatgagatgaagtgattctaaaggagcaagggcattgcagaag
atcttgcactgaaggttctgacaggagtcagtagctctcatgagtacctg
aagcatacataaaataatacttatagacatacaatcaaaatacccgtgca
tgcattccttgacgttgctgataagattccttatagtttggacatgcaac
aagacttggtttttcaaatatgcaactatgactttggggaatgaatgtct
ttacttgagaacataatatttttagagtattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8230576_8231671
seq2: B6Ng01-015D21.b_41_1132 (reverse)

seq1  TATGTAGCAGAGGATGGCCTAGTCAGTCATCAAAGGGAGGAGAGGCCCTT  50
      ||||||||||| ||| ||||||||||||||| || ||||| |||| ||||
seq2  TATGTAGCAGA-GAT-GCCTAGTCAGTCATCCAAAGGAGG-GAGGGCCTT  47

seq1  GGTCCTTTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGGCCAGGA  100
      ||||||||||||||||||||  ||||||||||||||||||||| ||||| 
seq2  GGTCCTTTGAAGGTTCTATG--CCAGTATAGGGAAATGCCAGGCCCAGG-  94

seq1  AGCAGGAACGGGTGGGTGAG-TAAGCAGGGGGATTTGGTAGAAGATAGGG  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGCAGGAACGGGTGGGTGAGTTAAGCAGGGGGATTTGGTAGAAGATAGGG  144

seq1  GATTTTTGGAGGGGAAACTAGGAAAGGGAATGACA-TTTGAAATGTAAAT  198
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  GATTTTTGGAGGGGGAACTAGGAAAGGGAATGACATTTTGAAATGTAAAT  194

seq1  AAAGAAAATATCTAAAAACATTTTTTTTAAAAAATCAAAAAAGTAGACAA  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGAAAATATCTAAAAACATTTTTTTTAAAAAATCAAAAAAGTAGAC-A  243

seq1  TCAATAGCAAAAA-TTGACTTGAGAAATGACAATGGTGGCATGTTAAGTT  297
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAATAGCAAAAATTTGACTTGAGAAATGACAATGGTGGCATGTTAAGTT  293

seq1  CTGATTTTCAGTTAAATAGCTTCAAGATTGGTGTGTGTATGTGTATGAGT  347
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGA-TTTCAGTTAAATAGCTTCAAGATTGGTGTGTGTATGTGTATGAGT  342

seq1  ATATTTGTGGTTGTGTGTGCATACATGTGTATATTTGAGTGCATGTGTGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTGGTTGTGTGTGCATACATGTGTATATTTGAGTGCATGTGTGC  392

seq1  TGTATGTATATTAGTGAGAGAGAGTGTGTGTGT-CCATTTATTCTAGATG  446
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTATGTATATTAGTGAGAGAGAGTGTGTGTGTCCCATTTATTCTAGATG  442

seq1  TATATATGTGTGTGAGCACACATGAGTGCCTGTTTGTGCAAGTGCATGCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTGTGTGAGCACACATGAGTGCCTGTTTGTGCAAGTGCATGCA  492

seq1  TATGTGTGTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  542

seq1  GTGTAAACTCATTCATACTGAAAATGGATAATAAGAAACTTCCTGGGGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAACTCATTCATACTGAAAATGGATAATAAGAAACTTCCTGGGGTC  592

seq1  TATGCCTTTGTTGGATTATATGGTCTGTTGACTTATTTTAATTCTATAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTTGTTGGATTATATGGTCTGTTGACTTATTTTAATTCTATAAG  642

seq1  CACTTTAAGGAATAAAGAATTGTCTGCTTGTTGATAACAGCTGGGAGTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAAGGAATAAAGAATTGTCTGCTTGTTGATAACAGCTGGGAGTGG  692

seq1  AAAAATTTTGACTCCTAATACAAAAAGATGGGGCAGGAATAAATCTGAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTGACTCCTAATACAAAAAGATGGGGCAGGAATAAATCTGAAG  742

seq1  CCAAAGAATTATATGAGTGTATTTTTAAAAGAATCAAAGTCTTCACAAAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAATTATATGAGTGTATTTTTAAAAGAATCAAAGTCTTCACAAAC  792

seq1  CTAGGATAGTATTATCCAACAAAAAATGTTATATTCATACTCATTCTTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATAGTATTATCCAACAAAAAATGTTATATTCATACTCATTCTTGA  842

seq1  GTTTTATTGATGAATTTGTAATTAGGCACAGCGTTCTCCATTACATAACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTGATGAATTTGTAATTAGGCACAGCGTTCTCCATTACATAACA  892

seq1  GACAAGAGAACAAAGCACTGATGGAGAGCGAACCATCCCTTCCTGCTCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAGAACAAAGCACTGATGGAGAGCGAACCATCCCTTCCTGCTCTG  942

seq1  GCACAGATCCTTCCTCAGAATGGACCAGGTTGGATCATACAAGAGGCCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGATCCTTCCTCAGAATGGACCAGGTTGGATCATACAAGAGGCCCA  992

seq1  TTTGCCAGAGACTGGATTTTCATAATGTGAGCCATTCTTTCTAATTGTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGAGACTGGATTTTCATAATGTGAGCCATTCTTTCTAATTGTAA  1042

seq1  TTACAGATAATGTTGCTGGGAGAACTGAAGACACATTGAATAATGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATAATGTTGCTGGGAGAACTGAAGACACATTGAATAATGAATTC  1092


seq1: chr2_8131843_8132985
seq2: B6Ng01-015D21.g_68_1200

seq1  GAATTCCAGATAACCCATTTAACTCTGTCAGTTTAATCCCCTGATAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATAACCCATTTAACTCTGTCAGTTTAATCCCCTGATAATTC  50

seq1  CATTCTCTAACATCACTACACTGTGAATTTGATAATTTTCCCAGTCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTAACATCACTACACTGTGAATTTGATAATTTTCCCAGTCAGGT  100

seq1  AAGCTTATATTTTTGCATTTTTTATTGTTTTGTAGGTGAAATCTTGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATATTTTTGCATTTTTTATTGTTTTGTAGGTGAAATCTTGTATG  150

seq1  ACTCTCTGGACCACCTGGCCCTTACCGTGTATCCCACGGTCTCCAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGGACCACCTGGCCCTTACCGTGTATCCCACGGTCTCCAGGAAC  200

seq1  TTATGATAACCCTCCTACCTCTGCATCATGGAGTGCTGAGAATACTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATAACCCTCCTACCTCTGCATCATGGAGTGCTGAGAATACTGCTA  250

seq1  AAACACTAATTTTATTATGTATCCTATAATTTAAATATTGCCAAACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTAATTTTATTATGTATCCTATAATTTAAATATTGCCAAACACTC  300

seq1  CTTATCTCTCTGACAAACTAATACACCTTAATTTGCCATGTATAGATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTCTCTGACAAACTAATACACCTTAATTTGCCATGTATAGATAGA  350

seq1  TGATTCAAACTTCTATAGCTCGGGCTGGCTTTAGAGTACAGCTCTGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAAACTTCTATAGCTCGGGCTGGCTTTAGAGTACAGCTCTGGGTA  400

seq1  ACCTGACATTTCTATTTTTTTGTCCTTTTTTTTTGGCATTTTCTTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACATTTCTATTTTTTTGTCCTTTTTTTTTGGCATTTTCTTTATTA  450

seq1  GGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCTTCCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCTTCCACAT  500

seq1  CCTCCCCCTCCCCCCACTCCCCTACCCACCTCTTGGCCCTGGCGTTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTCCCCCCACTCCCCTACCCACCTCTTGGCCCTGGCGTTCCCC  550

seq1  TGTACTGAGGCTAATAAGGCTCCACTAGTAGATAATGTCTCTGATTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGAGGCTAATAAGGCTCCACTAGTAGATAATGTCTCTGATTCCTT  600

seq1  ATACTCTCTTTATCAAGCCCCTAGTTGCTGATTATAATGTAATTTCGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTCTTTATCAAGCCCCTAGTTGCTGATTATAATGTAATTTCGACA  650

seq1  CAACTTGACCTCTGCAACACCAACTGCTGACATTTCACTGAAAGTATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGACCTCTGCAACACCAACTGCTGACATTTCACTGAAAGTATCTG  700

seq1  TGTCATATGTCTCTCATCCTTTCATGGAGCTTTTCACTACTAAAGAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATGTCTCTCATCCTTTCATGGAGCTTTTCACTACTAAAGAGTAG  750

seq1  CCTGGCTAATTTCTATACTCGCAGCACTTTGCAGTTGTTCCATATACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTAATTTCTATACTCGCAGCACTTTGCAGTTGTTCCATATACATT  800

seq1  TGCAGAACTAAACTGAATGATGCATAATCAGCTGAGCTCCATGGGAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACTAAACTGAATGATGCATAATCAGCTGAGCTCCATGGGAAGGA  850

seq1  AAACCTAAATGAGATGAAGTGATTCTAAAGGAGCAAGGGCATTGCAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAAATGAGATGAAGTGATTCTAAAGGAGCAAGGGCATTGCAGAAG  900

seq1  ATCTTGCACTGAAGGTTCTGACAGGAGTCAGTAGCTCTCATGAGTACCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCACTGAAGGTTCTGACAGGAGTCAGTAGCTCTCATGAGTACCTG  950

seq1  AAGCATACATAAAATAATACTTTATAAGACATACAATCAAAATACCCGTG  1000
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AAGCATACATAAAATAATAC-TTAT-AGACATACAATCAAAATACCCGTG  998

seq1  CATGCATTTCCTGACGTTGCTGATAAGATTCCTTATAGTTTGAACAATGC  1050
      |||||||| | ||||||||||||||||||||||||||||||| || ||||
seq2  CATGCATTCCTTGACGTTGCTGATAAGATTCCTTATAGTTTGGAC-ATGC  1047

seq1  AACAAGACTTTGGTATTTTCAAAATTATGCAACTATGACTTTGGGGATTG  1100
      |||||||| ||||| ||||||||  |||||||||||||||||||||| ||
seq2  AACAAGAC-TTGGT-TTTTCAAA--TATGCAACTATGACTTTGGGGAATG  1093

seq1  AATGTCTTATACTTGAGAGCATAATATTTTTAGATGTTATTCT  1143
      |||||||| ||||||||| |||||||||||||||   ||||||
seq2  AATGTCTT-TACTTGAGAACATAATATTTTTAGA--GTATTCT  1133


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