BAC Information

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BAC

Clone NameB6Ng01-016E05
Chromosome2 (Build37)
Map Location 16,646,161 - 16,647,264
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E05.b
ACCDH850280
length1,096
definitionDH850280|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E05, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcaaggtcatgacagtgagtataaaaagtaaaagcagaggct
ggaaacaaacatgctacaaaactagatcaattaagagggaaacttccaaa
ggagaatcagtttcgttaaaaattttatcatgtgatttttccattacttg
ctttagtatataaatggtttaaattatattccacaaggaaagtggtgtgc
ctgtgtgcttttattcaaaacatggatcattgatatttaaggcattttta
gttcaatttcattccaaaggaagaacattttggcaatgtctatgtaagag
ttatggattttgagcaaatttgtacagtactttgcccaatctaccaggcc
ttcaatccccaaaagatattaataaggtatggaatttataggctggtgta
tttcacttttcagccagaagaagaggtagttctaatggggataccatttc
agaaaagaatttttagttttattttattctcagactttgaagattggtga
aatttattaatagacactagtctctttagcaatgtgataaaatattttat
catatttgagatgcctaatgctaaatgtatgttatcattattatgtacgc
ataaactctaagaagatcatatttaaagaaaaacaaaacaagaagacaca
gttttaaaattcacctctctgcttggaaaaaaatgtgaaacttttgtcct
tccccagaccatctttttcctttctctttgtttctttgattttcctccta
ttagctcataagctatgagtgttatctggaatagagtaaacaaatcaatt
cccataaagtcttggctattttctacatttagaagaactctgtgtgttca
ctgtatggtgacagaatctcaggcagtaataacaaattgctttgacagat
gtgacaattgttggtcctctgtgtctgaatattgatcatcattctatgaa
ctcctagaaaagccacaagccctccatgggtcactcagaacacacaataa
gagtgtgtcaccttgatacaatttgattgatttctatggccccggttatg
ttaaatcattctaacataaaagcttcactgggtgggctttaatgtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16646161_16647264
seq2: B6Ng01-016E05.b_47_1142

seq1  GAATTCAGTCAAGGTCATGACAGTGAGTATAAAAAGTAAAAGCAGAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAAGGTCATGACAGTGAGTATAAAAAGTAAAAGCAGAGGCT  50

seq1  GGAAACAAACATGCTACAAAACTAGATCAATTAAGAGGGAAACTTCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAACATGCTACAAAACTAGATCAATTAAGAGGGAAACTTCCAAA  100

seq1  GGAGAATCAGTTTCGTTAAAAATTTTATCATGTGATTTTTCCATTACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATCAGTTTCGTTAAAAATTTTATCATGTGATTTTTCCATTACTTG  150

seq1  CTTTAGTATATAAATGGTTTAAATTATATTCCACAAGGAAAGTGGTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTATATAAATGGTTTAAATTATATTCCACAAGGAAAGTGGTGTGC  200

seq1  CTGTGTGCTTTTATTCAAAACATGGATCATTGATATTTAAGGCATTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCTTTTATTCAAAACATGGATCATTGATATTTAAGGCATTTTTA  250

seq1  GTTCAATTTCATTCCAAAGGAAGAACATTTTGGCAATGTCTATGTAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTTCATTCCAAAGGAAGAACATTTTGGCAATGTCTATGTAAGAG  300

seq1  TTATGGATTTTGAGCAAATTTGTACAGTACTTTGCCCAATCTACCAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGATTTTGAGCAAATTTGTACAGTACTTTGCCCAATCTACCAGGCC  350

seq1  TTCAATCCCCAAAAGATATTAATAAGGTATGGAATTTATAGGCTGGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCCCCAAAAGATATTAATAAGGTATGGAATTTATAGGCTGGTGTA  400

seq1  TTTCACTTTTCAGCCAGAAGAAGAGGTAGTTCTAATGGGGATACCATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTTTCAGCCAGAAGAAGAGGTAGTTCTAATGGGGATACCATTTC  450

seq1  AGAAAAGAATTTTTAGTTTTATTTTATTCTCAGACTTTGAAGATTGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAATTTTTAGTTTTATTTTATTCTCAGACTTTGAAGATTGGTGA  500

seq1  AATTTATTAATAGACACTAGTCTCTTTAGCAATGTGATAAAATATTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTAATAGACACTAGTCTCTTTAGCAATGTGATAAAATATTTTAT  550

seq1  CATATTTGAGATGCCTAATGCTAAATGTATGTTATCATTATTATGTACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGAGATGCCTAATGCTAAATGTATGTTATCATTATTATGTACGC  600

seq1  ATAAACTCTAAGAAGATCATATTTAAAGAAAAACAAAACAAGAAGACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTCTAAGAAGATCATATTTAAAGAAAAACAAAACAAGAAGACACA  650

seq1  GTTTTAAAATTCACCTCTCTGCTTGGAAAAAAATGTGAAACTTTTGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAATTCACCTCTCTGCTTGGAAAAAAATGTGAAACTTTTGTCCT  700

seq1  TCCCCAGACCATCTTTTTCCTTTCTCTTTGTTTCTTTGATTTTCCTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGACCATCTTTTTCCTTTCTCTTTGTTTCTTTGATTTTCCTCCTA  750

seq1  TTAGCTCATAAGCTATGAGTGTTATCTGGAATAGAGTAAACAAATCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATAAGCTATGAGTGTTATCTGGAATAGAGTAAACAAATCAATT  800

seq1  CCCATAAAGTCTTGGCTATTTTCTACATTTAGAAGAACTCTGTGTGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAAGTCTTGGCTATTTTCTACATTTAGAAGAACTCTGTGTGTTCA  850

seq1  CTGTATGGTGACAGAATCTCAGGCAGTAATAACAAATTGCTTTGACAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGTGACAGAATCTCAGGCAGTAATAACAAATTGCTTTGACAGAT  900

seq1  GTGACAATTGTTGGTCCTCTGTGTCTGAATATTGATCATCATTCTATGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAATTGTTGGTCCTCTGTGTCTGAATATTGATCATCATTCTATGAA  950

seq1  CTCCTA-AAAAGCCACAAGCCCTCCATGGGTCACTCAGAACACCACATAA  999
      |||||| ||||||||||||||||||||||||||||||||||||   ||||
seq2  CTCCTAGAAAAGCCACAAGCCCTCCATGGGTCACTCAGAACACACAATAA  1000

seq1  GAGTGTGTCACCTTTGATACATTTTGATTGATTTTCTAT-GCCCCGTTTA  1048
      |||||||||||| |||||||| ||||||||| ||||||| |||||| |||
seq2  GAGTGTGTCACC-TTGATACAATTTGATTGA-TTTCTATGGCCCCGGTTA  1048

seq1  TGTTTTAAATCATTTCTTAAACATAAAAAGCTTTCACTGTGTGGGCTTTT  1098
      ||  |||||||| ||||  ||||| |||||| ||||||| |||||| |||
seq2  TG--TTAAATCA-TTCT--AACAT-AAAAGC-TTCACTGGGTGGGC-TTT  1090

seq1  AATGTT  1104
      ||||||
seq2  AATGTT  1096