BAC Information

Click to search

BAC

Clone NameB6Ng01-016E17
Chromosome2 (Build37)
Map Location 159,753,111 - 159,892,548
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043689
Downstream geneGm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E17.bB6Ng01-016E17.g
ACCDH850299DH850300
length526890
definitionDH850299|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E17, 5' end.DH850300|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,753,111 - 159,753,636)(159,891,661 - 159,892,548)
sequence
gaattccctaggaaccgctgataaaccaaggttccttgggaagtcccaca
gtcccaggcttttcctgattgagctggcttttctcacaaatatactctgg
gaaataatgacactaagcctagctccctgcccgcaattatgagaccagcc
attatagtggtttgtggtgagggagatttatgatttttgctgtgaggtgt
atttgtaattgagtctgcatctgctcagattggcccatggccttaggcag
attgtccaacttctctgaacctgtttcttgatggaaaatgggcatcaaaa
gaataattgtcagagactgctggggagggcaaaacaataaacaccatggt
ttttgttgttatttgaaataaatattaactattactgagattgttatggt
tacgaaacactattttgtgtaatctatttttgttaacagaatataatttc
ctcaactatagattgggtaagccactgagacattgtaaaataatgatgat
gatgatgatgatggatggatgatagg
gaattcaggcaacattggctgactgaggggaggggttgtagaagggggct
tctatctggacaacggggaggctctgattgaatgcagggacagggctcag
ggcctggggtttggtgacatgacactttgaatctgatctccaaagagcct
tattaagaaaacagtaaagctgagaattgcaccagtgtctccagcagact
cccaagtccccactaatgactcctattatagctttccattgcttcctgtt
tccccaagaaagtctcacattgtcatcccggcctgttaaacgttctgtgg
gcccattatcaaaatagcattttcagcttcattgaacacatgtaggaaat
gttgtcgtgtttaaaaggaaaaaaaaaaagaaaaaaagagctcacaactc
tgagaataagcccagattgtattggggtaattatctcttctccaatagct
ttttggaaaagaggatatttctaatttttttttggaaagctaagctgtac
atcgaaaaggctaaagttgtcaccgattagattagtgactcaacaattga
aacttgacattcaattaatttctccttcccccacctcctgctccgtgcct
cgcaggacaacctttcttcgtagtaataaagacagattgcacacaggttt
ctgatgggtgttttggtgcagggtcatttctgactatgtttctgtggaag
tggaaagcaagcctgcaaatttaagtggtgaatggatcccaaacatgata
ctgcgggggttcagaccagggtcactccagatagaaggcgtggctcagag
gaatgcatgtgctgcaagagagaggggatcaaagggactggagaggccca
gcttgtaaaagtgcatcctttgatcatcatcagctgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159753111_159753636
seq2: B6Ng01-016E17.b_44_569

seq1  GAATTCCCTAGGAACCGCTGATAAACCAAGGTTCCTTGGGAAGTCCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAGGAACCGCTGATAAACCAAGGTTCCTTGGGAAGTCCCACA  50

seq1  GTCCCAGGCTTTTCCTGATTGAGCTGGCTTTTCTCACAAATATACTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGGCTTTTCCTGATTGAGCTGGCTTTTCTCACAAATATACTCTGG  100

seq1  GAAATAATGACACTAAGCCTAGCTCCCTGCCCGCAATTATGAGACCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATGACACTAAGCCTAGCTCCCTGCCCGCAATTATGAGACCAGCC  150

seq1  ATTATAGTGGTTTGTGGTGAGGGAGATTTATGATTTTTGCTGTGAGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTGGTTTGTGGTGAGGGAGATTTATGATTTTTGCTGTGAGGTGT  200

seq1  ATTTGTAATTGAGTCTGCATCTGCTCAGATTGGCCCATGGCCTTAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAATTGAGTCTGCATCTGCTCAGATTGGCCCATGGCCTTAGGCAG  250

seq1  ATTGTCCAACTTCTCTGAACCTGTTTCTTGATGGAAAATGGGCATCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCAACTTCTCTGAACCTGTTTCTTGATGGAAAATGGGCATCAAAA  300

seq1  GAATAATTGTCAGAGACTGCTGGGGAGGGCAAAACAATAAACACCATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTGTCAGAGACTGCTGGGGAGGGCAAAACAATAAACACCATGGT  350

seq1  TTTTGTTGTTATTTGAAATAAATATTAACTATTACTGAGATTGTTATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTATTTGAAATAAATATTAACTATTACTGAGATTGTTATGGT  400

seq1  TACGAAACACTATTTTGTGTAATCTATTTTTGTTAACAGAATATAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAAACACTATTTTGTGTAATCTATTTTTGTTAACAGAATATAATTTC  450

seq1  CTCAACTATAGATTGGGTAAGCCACTGAGACATTGTAAAATAATGATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTATAGATTGGGTAAGCCACTGAGACATTGTAAAATAATGATGAT  500

seq1  GATGATGATGATGGATGGATGATAGG  526
      ||||||||||||||||||||||||||
seq2  GATGATGATGATGGATGGATGATAGG  526

seq1: chr2_159891661_159892548
seq2: B6Ng01-016E17.g_67_956 (reverse)

seq1  TAAGCAGCTGATGATGAACCAAAGATGCACTTCTAC-AGCTGGGCCTCTC  49
      ||||||||||||||||| | || ||||||||| ||| |||||||||||||
seq2  TAAGCAGCTGATGATGATCAAAGGATGCACTTTTACAAGCTGGGCCTCTC  50

seq1  CAGTCCCTTTGGTCCCCTCTCTCTTGCAGCACATGCATTCCTCTGAGCCA  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTTTGATCCCCTCTCTCTTGCAGCACATGCATTCCTCTGAGCCA  100

seq1  CGCCTTCTATCTGGAGTGACCCTGGTCTGAACCCCCGCAGTATCATGTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTCTATCTGGAGTGACCCTGGTCTGAACCCCCGCAGTATCATGTTT  150

seq1  GGGATCCATTCACCACTTAAATTTGCAGGCTTGCTTTCCACTTCCACAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCATTCACCACTTAAATTTGCAGGCTTGCTTTCCACTTCCACAGA  200

seq1  AACATAGTCAGAAATGACCCTGCACC-AAACACCCATCAGAAACCTGTGT  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACATAGTCAGAAATGACCCTGCACCAAAACACCCATCAGAAACCTGTGT  250

seq1  GCAATCTGTCTTTATTACTACGAAGAAAGGTTGTCCTGCGAGGCACGGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTGTCTTTATTACTACGAAGAAAGGTTGTCCTGCGAGGCACGGAG  300

seq1  CAGGAGGTGGGGGAAGGAGAAATTAATTGAATGTCAAGTTTCAATTGTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTGGGGGAAGGAGAAATTAATTGAATGTCAAGTTTCAATTGTTG  350

seq1  AGTCACTAATCTAATCGGTGACAACTTTAGCCTTTTCGATGTACAGCTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTAATCTAATCGGTGACAACTTTAGCCTTTTCGATGTACAGCTTA  400

seq1  GCTTTCCAAAAAAAAATTAGAAATATCCTCTTTTCCAAAAAGCTATTGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCAAAAAAAAATTAGAAATATCCTCTTTTCCAAAAAGCTATTGGA  450

seq1  GAAGAGATAATTACCCCAATACAATCTGGGCTTATTCTCAGAGTTGTGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATAATTACCCCAATACAATCTGGGCTTATTCTCAGAGTTGTGAG  500

seq1  CTCTTTTTTTCTTTTTTTTTTTCCTTTTAAACACGACAACATTTCCTACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTTCTTTTTTTTTTTCCTTTTAAACACGACAACATTTCCTACA  550

seq1  TGTGTTCAATGAAGCTGAAAATGCTATTTTGATAATGGGCCCACAGAACG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCAATGAAGCTGAAAATGCTATTTTGATAATGGGCCCACAGAACG  600

seq1  TTTAACAGGCCGGGATGACAATGTGAGACTTTCTTGGGGAAACAGGAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGGCCGGGATGACAATGTGAGACTTTCTTGGGGAAACAGGAAGC  650

seq1  AATGGAAAGCTATAATAGGAGTCATTAGTGGGGACTTGGGAGTCTGCTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAGCTATAATAGGAGTCATTAGTGGGGACTTGGGAGTCTGCTGG  700

seq1  AGACACTGGTGCAATTCTCAGCTTTACTGTTTTCTTAATAAGGCTCTTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGGTGCAATTCTCAGCTTTACTGTTTTCTTAATAAGGCTCTTTG  750

seq1  GAGATCAGATTCAAAGTGTCATGTCACCAAACCCCAGGCCCTGAGCCCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGATTCAAAGTGTCATGTCACCAAACCCCAGGCCCTGAGCCCTG  800

seq1  TCCCTGCATTCAATCAGAGCCTCCCCGTTGTCCAGATAGAAGCCCCCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCATTCAATCAGAGCCTCCCCGTTGTCCAGATAGAAGCCCCCTTC  850

seq1  TACAACCCCTCCCCTCAGTCAGCCAATGTTGCCTGAATTC  888
      ||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCCTCCCCTCAGTCAGCCAATGTTGCCTGAATTC  890