BAC Information

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BAC

Clone NameB6Ng01-016I02
Chromosome2 (Build37)
Map Location 142,776,330 - 142,776,861
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I02.bB6Ng01-016I02.g
ACCDH850448DH850449
length909776
definitionDH850448|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I02, 5' end.DH850449|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctgttgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgctgtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgcccatccatgagcatgggagatctttccatctt
ctgagatctccttaaatttctttcctcagagacttgaagtttttatcata
cagatcttt
gaattctcatattggttccctgaactgtaaagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccat
ttaactctcctatctggccagtgcagaagacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatggggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtaccagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
tttttatgagtccagtgggtgtgggggatgcagagatattccttctaagg
gaaaagataagtttattgtatctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776330_142776861
seq2: B6Ng01-016I02.b_423_954 (reverse)

seq1  AAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGA  50
      |||||||||||||||||||||||||||||||||| |||||||||| ||| 
seq2  AAAGATCTGTATGATAAAAACTTCAAGTCTCTGAGGAAAGAAATTTAAGG  50

seq1  AGATCTCAGAAGATGGAAGGATCTCCCATGCTCATGGATTGGCAGGATCA  100
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  AGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATGGGCAGGATCA  100

seq1  ACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCA  150

seq1  ATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAAT  200

seq1  TTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTC  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTC  250

seq1  TCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  300

seq1  TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAG  350
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TACTACAGGGCAATTGTGATAAAAACAGCATGGTACTGGTATAGAGACAG  350

seq1  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  400

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAG  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAG  450

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  500

seq1  TAGAAGAATGGGAATCGATCCATACTTATCTC  532
      |||||||||| |||||||||||||||||||||
seq2  TAGAAGAATGCGAATCGATCCATACTTATCTC  532