BAC Information

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BAC

Clone NameB6Ng01-016K10
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,681 - 142,777,21637,814,830 - 37,815,226
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016K10.bB6Ng01-016K10.g
ACCDH850556DH850557
length1,034391
definitionDH850556|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K10, 5' end.DH850557|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,681 - 142,777,216)(37,814,830 - 37,815,226)
sequence
gaattcattctttttaatagctgagtagtactccattgtgtagatgtacc
acattttctgtatccattcctctgttgaggggcatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttgccagttggggcatcttctggatatatgcccaggagaggtattg
ctggatcctccggtagtactatgtccaattttctgaggaaccgccagacg
gatttccaaagtggttgtacaagcctgcaatcccaccaacaatggaggag
tattcctctttctccacatccacgccagcatctgctgtcacctgaatttt
tgatcttagacattctgactggtgtgaggtggaatctcagggttgttttg
atttgcatttccctgatgattaaggatgttgaacattttttcaggtgctt
ctttgccattcggtattcctcaggtgagaattctttgttcagttctgagc
cccattttttaatggggttgtttgattttctgaagtccaccttcttgagt
tctttatatatgttggatattagtcccctatctgatttaggataggtaaa
gatcctttcccaatctgttggtggtctctttgtcttattgacggtgtctt
ttgccttgcagaaactttggagtttcattaggtcccatttgtcaattctt
gatcttacagcacaagccattgctgttctgttcaggaatttttcccctgt
gcccatatcttcaaggcttttccccactttctcctctataagtttcagtg
tctctggtttatgtgaagttctttgatccacttagatttgaccttagtac
aaggagataagtatggatcgattcgcattcttctacatgataacaaccag
tgtgccagcaccaattgttgaaaatgctgtctttctccactggatggttt
ttagctcccttgtcgaagatcaagtgaccatagtgtggtgggttcatttc
tgggtcttcaattctattccattgggtctacttg
tttaaactcccataaatatcctagtgtcccacctacccacatcaaacaag
aaagggcagaagagagaggacatggccattagataagcaggtgagtacta
aatcattggaagtgaattttgaataactgagtgaaaaatacactgttctt
gtatttgaatagtttgccttctgggttctcagcccattctattagcaggt
accttagtggctgtgaactggtcacctttaacttcacaggtactaattcc
tctctgtgcaaaagggttagttaacaaaagatagattatgtattaaatac
atgtgatttttaaaaagaacatgtaacactttggctctacaaaagtgagg
tgtgtttctcctggggtttttttttgggggggggtggcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776681_142777216
seq2: B6Ng01-016K10.b_544_1078 (reverse)

seq1  CAAGTAGA-CCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  49
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  CAAGTAGACCCAATGGAATAGAATTGAAGACCCAGAAATGAACCCAC-CA  49

seq1  C-CTATGGTCACTTGATCTTCGACAAGGGAGCT-AAAACCATCCAGAGGA  97
      | ||||||||||||||||||||||||||||||| |||||||||||| || 
seq2  CACTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAACCATCCAGTGG-  98

seq1  AGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCA  147
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAAAGACAGCATTTTCAACAATTGGTGCTGGCAC-ACTGGTTGTTATCA  147

seq1  TGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAA  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAA  197

seq1  ATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTA  247
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  ATCTAAGTGGATCAAAGAACTTCACAT-AAACCAGAGACACTGAAACTTA  246

seq1  TAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAA  297
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAA  296

seq1  TTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAA  347
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCAAGAATTGACAA  346

seq1  ATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCA  396

seq1  ATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCT  447
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCT  446

seq1  AAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGT  496

seq1  GGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  536
      |||||||||||||||||| ||||||||||||||||||||
seq2  GGACTTCAGAAAATCAAACAACCCCATTAAAAAATGGGG  535

seq1: chr10_37814830_37815226
seq2: B6Ng01-016K10.g_67_463 (reverse)

seq1  TCTGCCACCCCCCCCCAAAAAAAAACCCCAGGAGAAACACACCTCACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACCCCCCCCCAAAAAAAAACCCCAGGAGAAACACACCTCACTTT  50

seq1  TGTAGAGCCAAAGTGTTACATGTTCTTTTTAAAAATCACATGTATTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGCCAAAGTGTTACATGTTCTTTTTAAAAATCACATGTATTTAAT  100

seq1  ACATAATCTATCTTTTGTTAACTAACCCTTTTGCACAGAGAGGAATTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCTATCTTTTGTTAACTAACCCTTTTGCACAGAGAGGAATTAGT  150

seq1  ACCTGTGAAGTTAAAGGTGACCAGTTCACAGCCACTAAGGTACCTGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAAGTTAAAGGTGACCAGTTCACAGCCACTAAGGTACCTGCTAA  200

seq1  TAGAATGGGCTGAGAACCCAGAAGGCAAACTATTCAAATACAAGAACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGGCTGAGAACCCAGAAGGCAAACTATTCAAATACAAGAACAGT  250

seq1  GTATTTTTCACTCAGTTATTCAAAATTCACTTCCAATGATTTAGTACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTCACTCAGTTATTCAAAATTCACTTCCAATGATTTAGTACTCA  300

seq1  CCTGCTTATCTAATGGCCATGTCCTCTCTCTTCTGCCCTTTCTTGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTATCTAATGGCCATGTCCTCTCTCTTCTGCCCTTTCTTGTTTGA  350

seq1  TGTGGGTAGGTGGGACACTAGGATATTTATGGGAGTTTAAAGAATTC  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTAGGTGGGACACTAGGATATTTATGGGAGTTTAAAGAATTC  397