BAC Information

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BAC

Clone NameB6Ng01-017G01
Chromosome2 (Build37)
Map Location 142,348,268 - 142,493,542
singlet/doubletdoublet
Overlap geneLOC668913, LOC668914, Kif16b
Upstream genenone
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017G01.bB6Ng01-017G01.g
ACCDH851081DH851082
length606867
definitionDH851081|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G01, 5' end.DH851082|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,492,939 - 142,493,542)(142,348,268 - 142,349,125)
sequence
gaattcattagacaaattcccggacctttttttttgtggcggggggagag
gggtgtccttctctggatactcaaaggcatatctatgacttctgatcact
tgtaaaactttttctgtgaagaaattgtattattgttcagttgtccttaa
atagttgacttatggaaatataaagccaaggaagactattctgaagtcag
gcagagtgagaatcccaatgaccatcacccttgggaaagtatcttcaaat
tccttaaccattattcatcacatctccccacataaccccattactgtgac
cagttatttattgtaatctttctttaaggagatagacatgtgcatagcaa
gccaataacaacaataaggggctgttgatcactagaggtctgacatgtca
ccaacaaagcagaaggaaccaagggtttttataagcaaaccaatttacca
aattaagccacttgattctataaaacaataagaaatggagggtttggggt
gaaaagatagaaaacaaaggtttaagatttttcttataagacagtgacaa
tacaaattttctgaaaagaaaaaaaatgaaagtacgttcattcatttttt
tcactt
gaattctttcatctgctgaaatacttctagcaagttcttggtgagagtgt
cactcaatttggcacctactgatgcagaacatacacacgggcgctatgac
ccaaaaatgtcactctggagcacatacctacagaactgtattcatgtatg
tataatagaatgactacagaactgttcataatatgccccaactggaaacc
atccaactgcccagaaacaatagtaaagggatataaatcatggtgtattc
acaagctgggataatctgcaatgatgagcatagacaatgtataattatat
ataaactacaggatcaccctcataagcgttcatatttaaagcaaaatcag
aatgcttgagccctgcacttgagactaacctgagtaagaaaataaaataa
taaatagggtaaaatcgaaggcaggtaagtgaagctgtgcgaagtgacag
ttttaatcattctttgggggagaggacagagggctcagtgagatgtcttc
catatgatgtaatctttctgcattgatataatacaacaaacacttctaaa
tctggtatagagagtcagaaacaagcatcttcgagaatccaaaaccaaac
agaaacataaaaaccaagagatacagtaccaagccagcaaagtcaaaaga
gctatctggctattcctgcccataagccattcaggcagcaaatagggatc
accctggacttccagaggaggagtgtttaacactccttctcttaagaaat
ccttgctttaagtcaactctaaggaacaggaaagagaatgctttactttc
tcatcttttccacagcacattacaatgcacttttacacattaataagacc
cctgggtaaatgcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142492939_142493542
seq2: B6Ng01-017G01.b_32_637 (reverse)

seq1  AAGTG-AAAAAATGAATGAACGTACTTTCATTTTTTTTC-TTTCAGAAAA  48
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGTGAAAAAAATGAATGAACGTACTTTCATTTTTTTTCTTTTCAGAAAA  50

seq1  TTTGTATTGTCACTGTCTTATAAGAAAAATCTTAAACCTTTGTTTTCTAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGTCACTGTCTTATAAGAAAAATCTTAAACCTTTGTTTTCTAT  100

seq1  CTTTTCACCCCAAACCCTCCATTTCTTATTGTTTTATAGAATCAAGTGGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCACCCCAAACCCTCCATTTCTTATTGTTTTATAGAATCAAGTGGC  150

seq1  TTAATTTGGTAAATTGGTTTGCTTATAAAAACCCTTGGTTCCTTCTGCTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGGTAAATTGGTTTGCTTATAAAAACCCTTGGTTCCTTCTGCTT  200

seq1  TGTTGGTGACATGTCAGACCTCTAGTGATCAACAGCCCCTTATTGTTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTGACATGTCAGACCTCTAGTGATCAACAGCCCCTTATTGTTGTT  250

seq1  ATTGGCTTGCTATGCACATGTCTATCTCCTTAAAGAAAGATTACAATAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTGCTATGCACATGTCTATCTCCTTAAAGAAAGATTACAATAAA  300

seq1  TAACTGGTCACAGTAATGGGGTTATGTGGGGAGATGTGATGAATAATGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGTCACAGTAATGGGGTTATGTGGGGAGATGTGATGAATAATGGT  350

seq1  TAAGGAATTTGAAGATACTTTCCCAAGGGTGATGGTCATTGGGATTCTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATTTGAAGATACTTTCCCAAGGGTGATGGTCATTGGGATTCTCA  400

seq1  CTCTGCCTGACTTCAGAATAGTCTTCCTTGGCTTTATATTTCCATAAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTGACTTCAGAATAGTCTTCCTTGGCTTTATATTTCCATAAGTC  450

seq1  AACTATTTAAGGACAACTGAACAATAATACAATTTCTTCACAGAAAAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTAAGGACAACTGAACAATAATACAATTTCTTCACAGAAAAAGT  500

seq1  TTTACAAGTGATCAGAAGTCATAGATATGCCTTTGAGTATCCAGAGAAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAGTGATCAGAAGTCATAGATATGCCTTTGAGTATCCAGAGAAGG  550

seq1  ACACCCCTCTCCCCCCGCCACAAAAAAAAAGGTCCGGGAATTTGTCTAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCTCTCCCCCCGCCACAAAAAAAAAGGTCCGGGAATTTGTCTAAT  600

seq1  GAATTC  604
      ||||||
seq2  GAATTC  606

seq1: chr2_142348268_142349125
seq2: B6Ng01-017G01.g_64_930

seq1  GAATTCTTTCATCTGCTGAAATACTTCTAGCAAGTTCTTGGTGAGAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATCTGCTGAAATACTTCTAGCAAGTTCTTGGTGAGAGTGT  50

seq1  CACTCAATTTGGCACCTACTGATGCAGAACATACACACGGGCGCTATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAATTTGGCACCTACTGATGCAGAACATACACACGGGCGCTATGAC  100

seq1  CCAAAAATGTCACTCTGGAGCACATACCTACAGAACTGTATTCATGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAATGTCACTCTGGAGCACATACCTACAGAACTGTATTCATGTATG  150

seq1  TATAATAGAATGACTACAGAACTGTTCATAATATGCCCCAACTGGAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGAATGACTACAGAACTGTTCATAATATGCCCCAACTGGAAACC  200

seq1  ATCCAACTGCCCAGAAACAATAGTAAAGGGATATAAATCATGGTGTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACTGCCCAGAAACAATAGTAAAGGGATATAAATCATGGTGTATTC  250

seq1  ACAAGCTGGGATAATCTGCAATGATGAGCATAGACAATGTATAATTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGGATAATCTGCAATGATGAGCATAGACAATGTATAATTATAT  300

seq1  ATAAACTACAGGATCACCCTCATAAGCGTTCATATTTAAAGCAAAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTACAGGATCACCCTCATAAGCGTTCATATTTAAAGCAAAATCAG  350

seq1  AATGCTTGAGCCCTGCACTTGAGACTAACCTGAGTAAGAAAATAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGAGCCCTGCACTTGAGACTAACCTGAGTAAGAAAATAAAATAA  400

seq1  TAAATAGGGTAAAATCGAAGGCAGGTAAGTGAAGCTGTGCGAAGTGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGGTAAAATCGAAGGCAGGTAAGTGAAGCTGTGCGAAGTGACAG  450

seq1  TTTTAATCATTCTTTGGGGGAGAGGACAGAGGGCTCAGTGAGATGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCATTCTTTGGGGGAGAGGACAGAGGGCTCAGTGAGATGTCTTC  500

seq1  CATATGATGTAATCTTTCTGCATTGATATAATACAACAAACACTTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGATGTAATCTTTCTGCATTGATATAATACAACAAACACTTCTAAA  550

seq1  TCTGGTATAGAGAGTCAGAAACAAGCATCTTCGAGAATCCAAAACCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTATAGAGAGTCAGAAACAAGCATCTTCGAGAATCCAAAACCAAAC  600

seq1  AGAAACATAAAAACCAAGAGATACAGTACCAAGCCAGCAAAGTCAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATAAAAACCAAGAGATACAGTACCAAGCCAGCAAAGTCAAAAGA  650

seq1  GCTATCTGGCTATTCCTGCCCATAAGCCATTCAGGCAGCAAATAGGGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTGGCTATTCCTGCCCATAAGCCATTCAGGCAGCAAATAGGGATC  700

seq1  ACCCTGGACTTCCAGAGGAGGAGTG-TTAACACTCC-TCTCTTAGGAAAT  748
      ||||||||||||||||||||||||| |||||||||| ||||||| |||||
seq2  ACCCTGGACTTCCAGAGGAGGAGTGTTTAACACTCCTTCTCTTAAGAAAT  750

seq1  CCTTGCTTTAAGTCAACTCTAAGGAACAGGAAAGAGAATGC-TTAC-TTC  796
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  CCTTGCTTTAAGTCAACTCTAAGGAACAGGAAAGAGAATGCTTTACTTTC  800

seq1  TCATC-TTTCCACAGCACATAGCAATGCAC-TTTACACA-TAAT-AGA-C  841
      ||||| ||||||||||||||  |||||||| |||||||| |||| ||| |
seq2  TCATCTTTTCCACAGCACATTACAATGCACTTTTACACATTAATAAGACC  850

seq1  CCTGGGTAAATGCACAG  858
      |||||||||||||||||
seq2  CCTGGGTAAATGCACAG  867