BAC Information

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BAC

Clone NameB6Ng01-017P03
Chromosome2 (Build37)
Map Location 143,340,151 - 143,341,288
singlet/doubletsinglet
Overlap geneLOC668916
Upstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
Downstream genePcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017P03.bB6Ng01-017P03.g
ACCDH851481DH851482
length1,130488
definitionDH851481|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P03, 5' end.DH851482|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgggttgccaagagaagttgacacatttctgcagtctgtaaa
aacctgtctcctgctgctatgtgggacttctggaatctttggctcaaatg
gctgtttttctttgataggcccaggattttagtggggtttagagcttgag
aaagatgtctgatgtaacagagtatcagtcctgttgtcaggatgcaggga
tcaatgtgtcctgcagttcagtaatcatctttctgggactcatctcagtc
tcagttcttgacctaataattcctactttcatgttacttcctgatggttt
agaagcatcctttcttcattttttgctgcattttaaatttagggaatgaa
ttaccatttacttgtgagttgaagtcttcctatttgtacttaacttataa
attggtttttcacagcaaagaatattgtaagacaactggaaagtgagttc
tgatagaaaaataaacacagaattctgtaatcccagccaattccatctcc
actgctcagtctctaaaatagaccaacgataacattgatttttaataaaa
aatgcaactcaactcttgaagacatttacaactttaaatacaaacacaat
atagtgtatgcaagttacttgtattctgtttagtaaacttgtggatttac
cctgttgtttggtttataatttcaaggcaagaatccatcctgttaaggtg
tttaccctacactaacatatgtgagcatcactgaaattaattaggtttct
tttcccacacaattaaactataaactaagcttgggagcctagctaaaaca
aacagggattacaaagatatgtcagaatttaacagtgttacaagttcatt
gaaaagcaaaattttcagttttgaaaaaaaaatctgaaaatcaaacctaa
cttgattcccagaggtataaagacaggtgggttatggggtcactagatct
ttgtctttgctgtggcagagtgaaaatcatcacacgtgtcagagctgtag
cctcgatatgactacgtataactggtgataggcatattattatatgcata
ttaccacattgcaaaaatattatgtatattctaggtttgataaatgtaca
taaattaagggcagaaccacaaacttttac
agaagtctcaacaagctgaagtgcccaagcgatgacgtctcagtcccact
tgggtgggagaagaaagcaatcagaagtggagggggagagaaggacttgg
gacgaaaagtgaattgggtggacagtggagagaagactggaacctgatct
ggtattgggtgggggtaaaggactgaagccctgagggccagcagaaaaaa
atggaaacaggcaacctcaggaaataggaggttggtgagaccctccagaa
tgcaccagagacccggatggtgagagactcccaaaactcacagggaggga
cctttgatgaaatgccctacagtaaggagagggaacttacagagcccact
gccatcagggagacagaacatcaagtgagtgatgggattgccatcccaca
gtcacacctctgacccataattgttcctgtctgaaagaattacagggatg
gaaatggaaatgagcctgagggaaaaaaggtccaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143340151_143341288
seq2: B6Ng01-017P03.b_42_1171 (reverse)

seq1  GTAAAAGTTTTGTGGTCTTGCCTTTTAATTTATGTACATTTTATCAAACC  50
      ||||||| ||||||||  ||||  |||||||||||||| |||||||||||
seq2  GTAAAAG-TTTGTGGTTCTGCC-CTTAATTTATGTACA-TTTATCAAACC  47

seq1  TAGATATATACATATAATATATGCAAATGTGTAAATATGCATATAATAAT  100
      |||| |||||||||  || | ||| ||||||  |||||||||||||||||
seq2  TAGA-ATATACATAATATTTTTGC-AATGTGGTAATATGCATATAATAAT  95

seq1  ATGCCTTATCA-CAG-TATACGTAGTCATATTCGAGGCTACAGTTCTGAC  148
      ||||| ||||| ||| |||||||||||||| |||||||||||| ||||||
seq2  ATGCC-TATCACCAGTTATACGTAGTCATA-TCGAGGCTACAGCTCTGAC  143

seq1  ACGTGTGATGATTTTTCACTCTGCCACAGCAAAGACAAAGATCTAGTGAC  198
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGATGA-TTTTCACTCTGCCACAGCAAAGACAAAGATCTAGTGAC  192

seq1  CCCATAACCCACCTTGTCTTTATACCTCTGGGAATCAAGTTAGGTTTGAT  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCATAACCCACC-TGTCTTTATACCTCTGGGAATCAAGTTAGGTTTGAT  241

seq1  TTTCAGATTTTTTTTTCAAAACTGAAAATTTTGCTTTTCAATGAACTTTG  298
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCAGATTTTTTTTTCAAAACTGAAAATTTTGCTTTTCAATGAAC-TTG  290

seq1  TAACACTGTTAAATTCTGACATATCTTTGTAATCCCTGTTTGTTTTAGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGTTAAATTCTGACATATCTTTGTAATCCCTGTTTGTTTTAGCT  340

seq1  AGGCTCCCAAGCTTAGTTTATAGTTTAATTGTGTGGGAAAAGAAACCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCCAAGCTTAGTTTATAGTTTAATTGTGTGGGAAAAGAAACCTAA  390

seq1  TTAATTTCAGTGATGCTCACATATGTTAGTGTAGGGTAAACACCTTAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCAGTGATGCTCACATATGTTAGTGTAGGGTAAACACCTTAACA  440

seq1  GGATGGATTCTTGCCTTGAAATTATAAACCAAACAACAGGGTAAATCCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATTCTTGCCTTGAAATTATAAACCAAACAACAGGGTAAATCCAC  490

seq1  AAGTTTACTAAACAGAATACAAGTAACTTGCATACACTATATTGTGTTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTACTAAACAGAATACAAGTAACTTGCATACACTATATTGTGTTTG  540

seq1  TATTTAAAGTTGTAAATGTCTTCAAGAGTTGAGTTGCATTTTTTATTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAGTTGTAAATGTCTTCAAGAGTTGAGTTGCATTTTTTATTAAA  590

seq1  AATCAATGTTATCGTTGGTCTATTTTAGAGACTGAGCAGTGGAGATGGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGTTATCGTTGGTCTATTTTAGAGACTGAGCAGTGGAGATGGAA  640

seq1  TTGGCTGGGATTACAGAATTCTGTGTTTATTTTTCTATCAGAACTCACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGGATTACAGAATTCTGTGTTTATTTTTCTATCAGAACTCACTT  690

seq1  TCCAGTTGTCTTACAATATTCTTTGCTGTGAAAAACCAATTTATAAGTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTGTCTTACAATATTCTTTGCTGTGAAAAACCAATTTATAAGTTA  740

seq1  AGTACAAATAGGAAGACTTCAACTCACAAGTAAATGGTAATTCATTCCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAATAGGAAGACTTCAACTCACAAGTAAATGGTAATTCATTCCCT  790

seq1  AAATTTAAAATGCAGCAAAAAATGAAGAAAGGATGCTTCTAAACCATCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAAATGCAGCAAAAAATGAAGAAAGGATGCTTCTAAACCATCAG  840

seq1  GAAGTAACATGAAAGTAGGAATTATTAGGTCAAGAACTGAGACTGAGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACATGAAAGTAGGAATTATTAGGTCAAGAACTGAGACTGAGATG  890

seq1  AGTCCCAGAAAGATGATTACTGAACTGCAGGACACATTGATCCCTGCATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGAAAGATGATTACTGAACTGCAGGACACATTGATCCCTGCATC  940

seq1  CTGACAACAGGACTGATACTCTGTTACATCAGACATCTTTCTCAAGCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAACAGGACTGATACTCTGTTACATCAGACATCTTTCTCAAGCTCT  990

seq1  AAACCCCACTAAAATCCTGGGCCTATCAAAGAAAAACAGCCATTTGAGCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCACTAAAATCCTGGGCCTATCAAAGAAAAACAGCCATTTGAGCC  1040

seq1  AAAGATTCCAGAAGTCCCACATAGCAGCAGGAGACAGGTTTTTACAGACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTCCAGAAGTCCCACATAGCAGCAGGAGACAGGTTTTTACAGACT  1090

seq1  GCAGAAATGTGTCAACTTCTCTTGGCAACCCATAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATGTGTCAACTTCTCTTGGCAACCCATAGAATTC  1130