BAC Information

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BAC

Clone NameB6Ng01-017P05
Chromosome2 (Build37)
Map Location 37,341,982 - 37,481,711
singlet/doubletdoublet
Overlap geneRabgap1, Gpr21, 6430510M02Rik, Strbp
Upstream geneOlfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26
Downstream geneLOC639491, Dennd1a, LOC100040947, Lhx2, Nek6, Psmb7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017P05.bB6Ng01-017P05.g
ACCDH851485DH851486
length991968
definitionDH851485|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P05, 5' end.DH851486|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,341,982 - 37,342,975)(37,480,740 - 37,481,711)
sequence
gaattctttgctttgtaataaaagtattagagaatattagattggcaact
aacacaaatgcacagcacatcaagggagtatctaagtgataaatacttaa
cagtgttcagctactcattattttatctaccaatagtcccattggtgtta
agttagtgttttacagtgataagagttcctgcatcatggctggtcacctc
tgtcactgttacctttgaaaaaagtgcccctagagctagagaatagatgg
tacatttggtgattaattttgtaaagtggctttttcatctttattaagct
ggtatttattagctcctttccttgttttaataataacaacattagtatta
ataacacaaggtcagcactacctaagattagtaacttgtcatggctaggc
aataagattagtaacttgtcatggctaggcaataagaaattggtcacatt
tttttcatcctgttattcacattcagttctagtttctttcttgctattac
ttgtaaaccagaggaaagaatcagaaatttaaggtctttgttaccactgt
atctgacaagataattgttagcaacattaatgaaatatgctggccttctt
acagtgctgttcccaaagacaaggacaggcaatgctttaaacttcgacaa
ggaattgataagaagattgttatctgtgtgcagcaaacagctaacaaaga
acttgccattgaaaggtaaacatatttttttatgtttagtgtaaatatga
gttttgttttttaatctgtctagtagagtagtcatacactttattagaat
tttacttacagagtatattgactcttggtaattattttgtgcttttgcag
tgtttcttactctcaaaatcactctgataaatcttttagttattactgct
gatctctagtatgtgataataaaagaaaaaaattgcttagctcaggtaag
atgattatgatgacaatattggttaattatattcttagttt
gaattctatatggatcattgatcacttatggatggatcacttgctgctta
tgatggcctttatggctggcccattgccgttagtgtggcgttccatttgt
gtggagattatttgatagaatggtgtcttttaaatttctcatgaaatgta
aacacaaatcctaacatgttaagtgtaatgttacagtatatactctgcta
ttaggttaagtgcagtgtttgcctgatactaatactaactatggatataa
catatattgtgatattgatttaatttggaaattatgcttgatccagtcag
gactagaatttaaaaatttgtaaaaataatgatttaaaggcttatttata
aaataatgaacaaatatgaatatttgtgcagcaccatgagttctaatata
gagatgggtttctttgtttattctaatttttgctcttgaagtagcctgtt
tgactgaactctttatagttgagtgtttcctaatttaagtaggatttaga
tagatcaatttgtaccttgattatttattagctattacatatgtgaaaac
atgttaattgtaaattaattatatgactagttttttttttaaagtagggt
aattaaaaattgtaagatttttatctcaaatgtctttagaaaatatctaa
aattacttggtttaaaaaatgattaggtactggagaggtgtctcagctgt
taaagtctaggttcacaaccaaaattataaaaactggttggattagagta
gataatcatgggggaagagttaaatgctccttaaatgctaaattgtctac
acttttttggcttctcttttagatagaaaatgtcagctcacatttaactg
gaaatccttttacactggtgcatgtactaatttgtaatttaatatcttct
agccacagagcttatatgtgaaagtctataggtacttgtataaactttgg
gctctggggaggccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_37341982_37342975
seq2: B6Ng01-017P05.b_45_1035

seq1  GAATTCTTTGCTTTGTAATAAAAGTATTAGAGAATATTAGATTGGCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTTGTAATAAAAGTATTAGAGAATATTAGATTGGCAACT  50

seq1  AACACAAATGCACAGCACATCAAGGGAGTATCTAAGTGATAAATACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAATGCACAGCACATCAAGGGAGTATCTAAGTGATAAATACTTAA  100

seq1  CAGTGTTCAGCTACTCATTATTTTATCTACCAATAGTCCCATTGGTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCAGCTACTCATTATTTTATCTACCAATAGTCCCATTGGTGTTA  150

seq1  AGTTAGTGTTTTACAGTGATAAGAGTTCCTGCATCATGGCTGGTCACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTGTTTTACAGTGATAAGAGTTCCTGCATCATGGCTGGTCACCTC  200

seq1  TGTCACTGTTACCTTTGAAAAAAGTGCCCCTAGAGCTAGAGAATAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGTTACCTTTGAAAAAAGTGCCCCTAGAGCTAGAGAATAGATGG  250

seq1  TACATTTGGTGATTAATTTTGTAAAGTGGCTTTTTCATCTTTATTAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGGTGATTAATTTTGTAAAGTGGCTTTTTCATCTTTATTAAGCT  300

seq1  GGTATTTATTAGCTCCTTTCCTTGTTTTAATAATAACAACATTAGTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTATTAGCTCCTTTCCTTGTTTTAATAATAACAACATTAGTATTA  350

seq1  ATAACACAAGGTCAGCACTACCTAAGATTAGTAACTTGTCATGGCTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACAAGGTCAGCACTACCTAAGATTAGTAACTTGTCATGGCTAGGC  400

seq1  AATAAGATTAGTAACTTGTCATGGCTAGGCAATAAGAAATTGGTCACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATTAGTAACTTGTCATGGCTAGGCAATAAGAAATTGGTCACATT  450

seq1  TTTTTCATCCTGTTATTCACATTCAGTTCTAGTTTCTTTCTTGCTATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATCCTGTTATTCACATTCAGTTCTAGTTTCTTTCTTGCTATTAC  500

seq1  TTGTAAACCAGAGGAAAGAATCAGAAATTTAAGGTCTTTGTTACCACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACCAGAGGAAAGAATCAGAAATTTAAGGTCTTTGTTACCACTGT  550

seq1  ATCTGACAAGATAATTGTTAGCAACATTAATGAAATATGCTGGCCTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACAAGATAATTGTTAGCAACATTAATGAAATATGCTGGCCTTCTT  600

seq1  ACAGTGCTGTTCCCAAAGACAAGGACAGGCAATGCTTTAAACTTCGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTGTTCCCAAAGACAAGGACAGGCAATGCTTTAAACTTCGACAA  650

seq1  GGAATTGATAAGAAGATTGTTATCTGTGTGCAGCAAACAGCTAACAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGATAAGAAGATTGTTATCTGTGTGCAGCAAACAGCTAACAAAGA  700

seq1  ACTTGCCATTGAAAGGTAAACATATTTTTTTATGTTTAGTGTAAATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCATTGAAAGGTAAACATATTTTTTTATGTTTAGTGTAAATATGA  750

seq1  GTTTTGTTTTTTAATCTGTCTAGTAGAGTAGTCATACACTTTATTAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTAATCTGTCTAGTAGAGTAGTCATACACTTTATTAGAAT  800

seq1  TTTACTTACAGAGTATATTGACTCTTGGTAATTATTTTGTGCTTTTTGCA  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTACTTACAGAGTATATTGACTCTTGGTAATTATTTTGTGC-TTTTGCA  849

seq1  GTGTTTCTTACTCTCAAAATCACTCTGATAAATC-TTTAGTTATTACTGC  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTGTTTCTTACTCTCAAAATCACTCTGATAAATCTTTTAGTTATTACTGC  899

seq1  TGATCTCTAGTATGTGATAATAAAAGAAAAAAATTGCTTAGCTCAGGTAA  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGATCTCTAGTATGTGATAATAAAAGAAAAAAATTGCTTAGCTCAGGT-A  948

seq1  AGATGATTATGATGACAATATTGGTTTAAGTTATATTCTTAGTTT  994
      ||||||||||||||||||||||||||  | |||||||||||||||
seq2  AGATGATTATGATGACAATATTGGTT--AATTATATTCTTAGTTT  991

seq1: chr2_37480740_37481711
seq2: B6Ng01-017P05.g_68_1035 (reverse)

seq1  TCAAGGCCTCCCCAGCGCCCAAAGGTCTATTACAAGTACCTATAGACTTT  50
      ||||||||||||||| ||||||| || || ||||||||||||||||| ||
seq2  TCAAGGCCTCCCCAGAGCCCAAA-GTTTA-TACAAGTACCTATAGAC-TT  47

seq1  TCACATATAAGCTCTAGTGGCTAGAAGATATTAAATTACAAATTAGTACA  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCACATATAAGCTCT-GTGGCTAGAAGATATTAAATTACAAATTAGTACA  96

seq1  TGCACCAAGTGTTAAAAGGA-TTCCAGTTAAATGTGAGCTGACA-TTTCT  148
      |||||| |||| |||||||| ||||||||||||||||||||||| |||||
seq2  TGCACC-AGTG-TAAAAGGATTTCCAGTTAAATGTGAGCTGACATTTTCT  144

seq1  ATCTAAAAGAGAAGCCAAAAAAGTGTAGACAATTTAGCATTTAAGGAGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAGAAGCCAAAAAAGTGTAGACAATTTAGCATTTAAGGAGCA  194

seq1  TTTAACTCTTCCCCCATGATTATCTACTCTAATCCAACCAGTTTTTATAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTCTTCCCCCATGATTATCTACTCTAATCCAACCAGTTTTTATAA  244

seq1  TTTTGGTTGTGAACCTAGACTTTAACAGCTGAGACACCTCTCCAGTACCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTGTGAACCTAGACTTTAACAGCTGAGACACCTCTCCAGTACCT  294

seq1  AATCATTTTTTAAACCAAGTAATTTTAGATATTTTCTAAAGACATTTGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTTTAAACCAAGTAATTTTAGATATTTTCTAAAGACATTTGAG  344

seq1  ATAAAAATCTTACAATTTTTAATTACCCTACTTTAAAAAAAAAACTAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATCTTACAATTTTTAATTACCCTACTTTAAAAAAAAAACTAGTC  394

seq1  ATATAATTAATTTACAATTAACATGTTTTCACATATGTAATAGCTAATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTAATTTACAATTAACATGTTTTCACATATGTAATAGCTAATAA  444

seq1  ATAATCAAGGTACAAATTGATCTATCTAAATCCTACTTAAATTAGGAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAGGTACAAATTGATCTATCTAAATCCTACTTAAATTAGGAAAC  494

seq1  ACTCAACTATAAAGAGTTCAGTCAAACAGGCTACTTCAAGAGCAAAAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACTATAAAGAGTTCAGTCAAACAGGCTACTTCAAGAGCAAAAATT  544

seq1  AGAATAAACAAAGAAACCCATCTCTATATTAGAACTCATGGTGCTGCACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAACAAAGAAACCCATCTCTATATTAGAACTCATGGTGCTGCACA  594

seq1  AATATTCATATTTGTTCATTATTTTATAAATAAGCCTTTAAATCATTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATATTTGTTCATTATTTTATAAATAAGCCTTTAAATCATTATT  644

seq1  TTTACAAATTTTTAAATTCTAGTCCTGACTGGATCAAGCATAATTTCCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAATTTTTAAATTCTAGTCCTGACTGGATCAAGCATAATTTCCAA  694

seq1  ATTAAATCAATATCACAATATATGTTATATCCATAGTTAGTATTAGTATC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCAATATCACAATATATGTTATATCCATAGTTAGTATTAGTATC  744

seq1  AGGCAAACACTGCACTTAACCTAATAGCAGAGTATATACTGTAACATTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACACTGCACTTAACCTAATAGCAGAGTATATACTGTAACATTAC  794

seq1  ACTTAACATGTTAGGATTTGTGTTTACATTTCATGAGAAATTTAAAAGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACATGTTAGGATTTGTGTTTACATTTCATGAGAAATTTAAAAGAC  844

seq1  ACCATTCTATCAAATAATCTCCACACAAATGGAACGCCACACTAACGGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTATCAAATAATCTCCACACAAATGGAACGCCACACTAACGGCA  894

seq1  ATGGGCCAGCCATAAAGGCCATCATAAGCAGCAAGTGATCCATCCATAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCAGCCATAAAGGCCATCATAAGCAGCAAGTGATCCATCCATAAG  944

seq1  TGATCAATGATCCATATAGAATTC  972
      ||||||||||||||||||||||||
seq2  TGATCAATGATCCATATAGAATTC  968