BAC Information

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BAC

Clone NameB6Ng01-018J15
Chromosome2 (Build37)
Map Location 18,264,499 - 18,265,639
singlet/doubletsinglet
Overlap geneDnajc1
Upstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, LOC100041388, LOC623325
Downstream geneLOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018J15.bB6Ng01-018J15.g
ACCDH851953DH851954
length1,1621,124
definitionDH851953|Mus musculus domesticus DNA, BAC clone: B6Ng01-018J15, 5' end.DH851954|Mus musculus domesticus DNA, BAC clone: B6Ng01-018J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgactggctcagaagcacctaaaaaaaat
gttcaacacccttaaaaatcagggaaatacaaatcaaaataaccctgaga
ttccacctcacaccagtcagagtaactatgatcaaaaactcaggtgacag
caggtgctggtgaggatgtggagaaagaggaacactcttccactgctggt
gagattgcaagctggtacaaccactctggaaatcagtttggtggatcttc
agaaaattggacatagtactaccagaggatgcagcaataccactcctggg
catgtacaaagaagatgctccaacatgtaataaggacacatgccccacta
tgttaatagcaatattatttataatagccagaacctggaaagaacacagg
tgtccctcaacagaagaatagaaacagaaaatgttgtacatttacacaat
ggggtactatgcagctattaaaaacaatgaatttattaaatactttggca
aatggatgattcttgaggatatcatcctgagtgaggtacacaaaagaaca
cacatgatataagtagatattagcccagaagctcagaattctcaagatac
aattcacaaaacacatgaaactcaagaagaaggaagaccaaagcaaggat
acttcgatccttcctagaagggggaaccaaatactcatggaaagagttat
agagacaaagtatgaagcacagactgaaggagtgaccatccatagactgc
cccacctggggattcaacccacatacaaccaccaaacccagacattatta
tgaatgccaacaagagcttgctgacaggagcctgatatagccgtctcctg
agaggctctgccagtgcctaacaaatacagaagtgaatgctaacacccat
ccattagatggagcacaggctccccaatgaagtagctagaaaagtaccca
aagggctgaaggggtttgcagccccatagagaaacacatatgactaactg
ctaccaccagagtccctggactaacactacaaagaaacacatgttgactc
atttatgtgtattttagcagagatgactagtcgacctatggaaggaaggc
ctgtctggtagatctatggcctgtatagggatgcaggcagaagtggatgg
tggctggttgcg
gaattcaatactatgcatatttattattttaaaccagactctagtctgaa
cagagacacatatatatgcatatattatatatccacaaaccatatatgat
aactcataaaatgagctcgtatatgaagttagtagattatattattaaag
ttaaaatgttcaaactggatagagcttcataaaccaaatcatctataatc
ttaatttctatcaaatgatcagatggttttaattatagaacaatgtaaat
atgtatatatgagtgtatgtatgtatgtggccaatactctaccaaaattg
aaatgcaaagacctgttaactgaaatgtgaaaagataatagcaataccaa
ttaaaaacattaatttcattttaaacatttgattttttaaacacttgatt
cttattaaaatcttttactaacttattagatatgcacggtcattttaata
ctaggtataagcatactactagcacttttatatactttttccaataaata
tcaatggcaataatatagacatctaagacacttaagtagccatttttcaa
attactagtgggtttgttgaattaatttcacatgacattaattcattctt
aaatatgattttttaaaagtctactttggattgtatattagtaaaataat
gtaaagcacacatgtgaaaggcgagcacactttctcttaggaagtactga
agctccatctagaggctctcctcctgccacagtcatttgcaatataagta
gtatcacctagaaatgtgaagaacatcgaaatgtcagggatttcctttgt
acagatccttttgttattcataatgagttcttgccctaaccttctcaggg
tggctctagctccatcactgccatcaagtggtaaaaactaaaactgaacc
taaagacagaaggaagaaagcagacagaagagactgtgccctcttacact
catcactctcagtagtgcatgagtcaccctttctcctttgtcatttctat
atcaactttgggggaaacacagtcatggtgtatctcaaaagaatagcatt
tttcttttttcttgctttttccttttttggtttaatgtggttttcataac
agggtcctctggatttctgctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_18264499_18265639
seq2: B6Ng01-018J15.g_64_1187

seq1  GAATTCAATACTATGCATATTTATTATTTTAAACCAGACTCTAGTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACTATGCATATTTATTATTTTAAACCAGACTCTAGTCTGAA  50

seq1  CAGAGACACATATATATGCATATATTATATATCCACAAACCATATATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACATATATATGCATATATTATATATCCACAAACCATATATGAT  100

seq1  AACTCATAAAATGAGCTCGTATATGAAGTTAGTAGATTATATTATTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATAAAATGAGCTCGTATATGAAGTTAGTAGATTATATTATTAAAG  150

seq1  TTAAAATGTTCAAACTGGATAGAGCTTCATAAACCAAATCATCTATAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTTCAAACTGGATAGAGCTTCATAAACCAAATCATCTATAATC  200

seq1  TTAATTTCTATCAAATGATCAGATGGTTTTAATTATAGAACAATGTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCTATCAAATGATCAGATGGTTTTAATTATAGAACAATGTAAAT  250

seq1  ATGTATATATGAGTGTATGTATGTATGTGGCCAATACTCTACCAAAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATGAGTGTATGTATGTATGTGGCCAATACTCTACCAAAATTG  300

seq1  AAATGCAAAGACCTGTTAACTGAAATGTGAAAAGATAATAGCAATACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAAGACCTGTTAACTGAAATGTGAAAAGATAATAGCAATACCAA  350

seq1  TTAAAAACATTAATTTCATTTTAAACATTTGATTTTTTAAACACTTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACATTAATTTCATTTTAAACATTTGATTTTTTAAACACTTGATT  400

seq1  CTTATTAAAATCTTTTACTAACTTATTAGATATGCACGGTCATTTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAATCTTTTACTAACTTATTAGATATGCACGGTCATTTTAATA  450

seq1  CTAGGTATAAGCATACTACTAGCACTTTTATATACTTTTTCCAATAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATAAGCATACTACTAGCACTTTTATATACTTTTTCCAATAAATA  500

seq1  TCAATGGCAATAATATAGACATCTAAGACACTTAAGTAGCCATTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCAATAATATAGACATCTAAGACACTTAAGTAGCCATTTTTCAA  550

seq1  ATTACTAGTGGGTTTGTTGAATTAATTTCACATGACATTAATTCATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAGTGGGTTTGTTGAATTAATTTCACATGACATTAATTCATTCTT  600

seq1  AAATATGATTTTTTAAAAGTCTACTTTGGATTGTATATTAGTAAAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATTTTTTAAAAGTCTACTTTGGATTGTATATTAGTAAAATAAT  650

seq1  GTAAAGCACACATGTGAAAGGCGAGCACACTTTCTCTTAGGAAGTACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCACACATGTGAAAGGCGAGCACACTTTCTCTTAGGAAGTACTGA  700

seq1  AGCTCCATCTAGAGGCTCTCCTCCTGCCACAGTCATTTGCAATATAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCATCTAGAGGCTCTCCTCCTGCCACAGTCATTTGCAATATAAGTA  750

seq1  GTATCACCTAGAAATGTGAAGAACATCGAAATGTCAGGGATTTCCTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACCTAGAAATGTGAAGAACATCGAAATGTCAGGGATTTCCTTTGT  800

seq1  ACAGATCCTTTTGTTATTCATAATGAGTTCTTGCCCTAACCTTCTCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTTTTGTTATTCATAATGAGTTCTTGCCCTAACCTTCTCAGGG  850

seq1  TGGCTCTAGCTCCATCACTGCCATCAAGTGGTAAAAAACTAAAACTGAAC  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGCTCTAGCTCCATCACTGCCATCAAGTGGT-AAAAACTAAAACTGAAC  899

seq1  CTAAAGACAGAAGGAAGAAAGCAGACAGAAGAGAACTGTGCCCTCTTACC  950
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  CTAAAGACAGAAGGAAGAAAGCAGACAGAAGAG-ACTGTGCCCTCTTA-C  947

seq1  ACTCATCACTCTCAGTAGTGCATGAGTTCACCCTTTTCTCCTATGTCATT  1000
      |||||||||||||||||||||||||| |||||| |||||||| ||||| |
seq2  ACTCATCACTCTCAGTAGTGCATGAG-TCACCC-TTTCTCCTTTGTCA-T  994

seq1  TTCTATATCAACTTTGGGGGAAACACAGTCATGTTGTTATCTCAAAAAGA  1050
      ||||||||||||||||||||||||||||||||| || |||||| ||||||
seq2  TTCTATATCAACTTTGGGGGAAACACAGTCATGGTG-TATCTC-AAAAGA  1042

seq1  ATAGCATTTTTTCTTTTTTCTTTGCTTTTTTCCTTTTTTTGTTTTATTGT  1100
      |||||| ||||||||||||| |||||||||  | ||||||| |||| |||
seq2  ATAGCA-TTTTTCTTTTTTC-TTGCTTTTT--CCTTTTTTGGTTTAATGT  1088

seq1  TGTTTTTTCAATACAGGGTTCCTCTGTGTATTTCTGCTGCC  1141
       |  ||||||  |||||| |||||  || ||||||||||||
seq2  GG--TTTTCATAACAGGG-TCCTC--TGGATTTCTGCTGCC  1124